RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	SEL1L3	Q68CR1	1132 aa		13.92	□□□□□ -0.18
RNF31-223	ENST00000560754	GCNT7	Q6ZNI0	430 aa		13.92	□□□□□ -0.18
RNF31-223	ENST00000560754		Q6ZSR6	202 aa		13.92	□□□□□ -0.18
RNF31-223	ENST00000560754	SLC22A18AS	Q8N1D0	253 aa		13.92	□□□□□ -0.18
RNF31-223	ENST00000560754	PCDH20	Q8N6Y1	951 aa	Known RBP	13.92	□□□□□ -0.18
RNF31-223	ENST00000560754	FAM181A	Q8N9Y4	354 aa		13.92	□□□□□ -0.18
RNF31-223	ENST00000560754	SNIP1	Q8TAD8	396 aa	Known RBP	13.92	□□□□□ -0.18
RNF31-223	ENST00000560754	ASB12	Q8WXK4	309 aa		13.92	□□□□□ -0.18
RNF31-223	ENST00000560754	CPA5	Q8WXQ8	436 aa		13.92	□□□□□ -0.18
RNF31-223	ENST00000560754	FGF11	Q92914	225 aa		13.92	□□□□□ -0.18
RNF31-223	ENST00000560754	PPP1R16A	Q96I34	528 aa		13.92	□□□□□ -0.18
RNF31-223	ENST00000560754	CFAP57	Q96MR6	1250 aa		13.92	□□□□□ -0.18
RNF31-223	ENST00000560754	LENG8	Q96PV6	779 aa	Predicted RBP	13.92	□□□□□ -0.18
RNF31-223	ENST00000560754	SPON2	Q9BUD6	331 aa		13.92	□□□□□ -0.18
RNF31-223	ENST00000560754	C1QTNF2	Q9BXJ5	285 aa		13.92	□□□□□ -0.18
RNF31-223	ENST00000560754	OSBPL2	Q9H1P3	480 aa		13.92	□□□□□ -0.18
RNF31-223	ENST00000560754	PRORY	Q9H606	182 aa		13.92	□□□□□ -0.18
RNF31-223	ENST00000560754	OR12D3	Q9UGF7	316 aa		13.92	□□□□□ -0.18
RNF31-223	ENST00000560754	RP1	P56715	2156 aa		13.92	□□□□□ -0.18
RNF31-223	ENST00000560754	ATM	Q13315	3056 aa		13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	POM121B	A6NF01	834 aa		13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	NEMP2	A6NFY4	417 aa		13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	MT-CO3	P00414	261 aa		13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	CYP1A1	P04798	512 aa	Predicted RBP	13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	MME	P08473	750 aa		13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	ADRB3	P13945	408 aa		13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	ITGB7	P26010	798 aa		13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	NEK3	P51956	506 aa		13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	CLDN2	P57739	230 aa		13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	DPCR1	Q3MIW9	517 aa		13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	MANEAL	Q5VSG8	457 aa		13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	KIAA1161	Q6NSJ0	714 aa		13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	FAM131B	Q86XD5	332 aa		13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	ZNF677	Q86XU0	584 aa		13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	EPS8L1	Q8TE68	723 aa		13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	CENPI	Q92674	756 aa	Predicted RBP	13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	DCBLD2	Q96PD2	775 aa		13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	KLF6	Q99612	283 aa	Predicted RBP	13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	MYOC	Q99972	504 aa		13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	CLSTN2	Q9H4D0	955 aa		13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	ATP13A1	Q9HD20	1204 aa		13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	FZD3	Q9NPG1	666 aa		13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	SAMSN1	Q9NSI8	373 aa	Known RBP	13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	NLGN3	Q9NZ94	848 aa		13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	NOCT	Q9UK39	431 aa	Known RBP	13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	FADS3	Q9Y5Q0	445 aa		13.91	□□□□□ -0.18
RNF31-223	ENST00000560754	LY6G6E	A0A0G2JKS1	128 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	SPTY2D1-AS1	A0A0U1RR47	76 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754		A6NNZ2	444 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754		F8VZ95	297 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	GOLGA8S	H3BPF8	625 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	TK2	O00142	265 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	RRP8	O43159	456 aa	Known RBP	13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	OPA1	O60313	960 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	CSF2	P04141	144 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	GP1BA	P07359	652 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	CHRNB2	P17787	502 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	MMP8	P22894	467 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	CCNH	P51946	323 aa	Predicted RBP	13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	FZD2	Q14332	565 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	CCDC14	Q49A88	953 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	RAB6C	Q53S08	254 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	TCP11X2	Q5H9J9	407 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	TAF3	Q5VWG9	929 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	LRRC69	Q6ZNQ3	347 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	ZSCAN30	Q86W11	494 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	NLRP14	Q86W24	1093 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	MSANTD4	Q8NCY6	345 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	GRIN3A	Q8TCU5	1115 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	RAB7B	Q96AH8	199 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	APOLD1	Q96LR9	279 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	CALN1	Q9BXU9	219 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	MAGEB5	Q9BZ81	275 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	RAB6C	Q9H0N0	254 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	CAAP1	Q9H8G2	361 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	USP29	Q9HBJ7	922 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	NDFIP2	Q9NV92	336 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	HECA	Q9UBI9	543 aa	Predicted RBP	13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	RAI2	Q9Y5P3	530 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	CSNK1G3	Q9Y6M4	447 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754		U3KQA8	63 aa		13.9	□□□□□ -0.18
RNF31-223	ENST00000560754	FLNB	O75369	2602 aa	Known RBP	13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	RAD51B	O15315	384 aa		13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	TSPAN6	O43657	245 aa		13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	BRINP1	O60477	761 aa		13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	RHOQ	P17081	205 aa		13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	EEF1G	P26641	437 aa	Known RBP	13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	ACTN2	P35609	894 aa		13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	ACVRL1	P37023	503 aa		13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	ETFB	P38117	255 aa		13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	HNRNPK	P61978	463 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	DAB2	P98082	770 aa		13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	ATP11A	P98196	1134 aa		13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	CDR2	Q01850	454 aa		13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	HS1BP3	Q53T59	392 aa		13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	HSP90AA4P	Q58FG1	418 aa		13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	NAA35	Q5VZE5	725 aa		13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	KYAT3	Q6YP21	454 aa	Known RBP	13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	EMC1	Q8N766	993 aa		13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	LSM14A	Q8ND56	463 aa	Known RBP	13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms