RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 SNX31Q8N9S9 440 aa16.27■□□□□ 0.19
PBX1-219ENST00000560641 CHAC2Q8WUX2 184 aa16.27■□□□□ 0.19
PBX1-219ENST00000560641 UBXN10Q96LJ8 280 aa16.27■□□□□ 0.19
PBX1-219ENST00000560641 PCDHAC1Q9H158 963 aa16.27■□□□□ 0.19
PBX1-219ENST00000560641 UPF3AQ9H1J1 476 aaKnown RBP16.27■□□□□ 0.19
PBX1-219ENST00000560641 DNMT3BQ9UBC3 853 aaKnown RBP16.27■□□□□ 0.19
PBX1-219ENST00000560641 A0A096LPK6 155 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 CLDN25C9JDP6 229 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 SDHDO14521 159 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 TIMM44O43615 452 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 PIGNO95427 931 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 LTFP02788 710 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 NCAM1P13591 858 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 GRM5P41594 1212 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 GRIA4P48058 902 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 TMTC4Q5T4D3 741 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 FSTL4Q6MZW2 842 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 ZC3H7AQ8IWR0 971 aaKnown RBP16.26■□□□□ 0.19
PBX1-219ENST00000560641 LEMD2Q8NC56 503 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 FAM156AQ8NDB6 213 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 STYXQ8WUJ0 223 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 SH3YL1Q96HL8 342 aaPredicted RBP16.26■□□□□ 0.19
PBX1-219ENST00000560641 MAGED4Q96JG8 741 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 VWA7Q9Y334 891 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 IL18RAPO95256 599 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 CKMT2P17540 419 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 FGFR3P22607 806 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 ADARB1P78563 741 aaKnown RBP16.26■□□□□ 0.19
PBX1-219ENST00000560641 DUOXA2Q1HG44 320 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 DHFR2Q86XF0 187 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 S100ZQ8WXG8 99 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 PGBD4Q96DM1 585 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 CENPNQ96H22 339 aaPredicted RBP16.26■□□□□ 0.19
PBX1-219ENST00000560641 ZBTB45Q96K62 511 aaPredicted RBP16.26■□□□□ 0.19
PBX1-219ENST00000560641 TRIM15Q9C019 465 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 NAA50Q9GZZ1 169 aaKnown RBP16.26■□□□□ 0.19
PBX1-219ENST00000560641 RMND5AQ9H871 391 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 THG1LQ9NWX6 298 aaKnown RBP16.26■□□□□ 0.19
PBX1-219ENST00000560641 MGAMO43451 1857 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 ZNF839A8K0R7 811 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 J3QRK9 145 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 SPTLC1O15269 473 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 ZNF182P17025 639 aaPredicted RBP16.26■□□□□ 0.19
PBX1-219ENST00000560641 LEPRP48357 1165 aaKnown RBP16.26■□□□□ 0.19
PBX1-219ENST00000560641 CAMK2BQ13554 666 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 PSMD5Q16401 504 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 LCN8Q6JVE9 175 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 GALNT18Q6P9A2 607 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 TMEM135Q86UB9 458 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 ERO1BQ86YB8 467 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 CCDC60Q8IWA6 550 aaPredicted RBP16.26■□□□□ 0.19
PBX1-219ENST00000560641 CBR4Q8N4T8 237 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 TTLL6Q8N841 843 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 PAPD5Q8NDF8 572 aaKnown RBP16.26■□□□□ 0.19
PBX1-219ENST00000560641 URGCPQ8TCY9 931 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 ACER1Q8TDN7 264 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 FBXL8Q96CD0 374 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 FAR2Q96K12 515 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 ACE2Q9BYF1 805 aaPredicted RBP16.26■□□□□ 0.19
PBX1-219ENST00000560641 VTA1Q9NP79 307 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 TXNDC16Q9P2K2 825 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 TRAF6Q9Y4K3 522 aa16.26■□□□□ 0.19
PBX1-219ENST00000560641 TTC24A2A3L6 582 aaPredicted RBP16.25■□□□□ 0.19
PBX1-219ENST00000560641 PPEF1O14829 653 aaPredicted RBP16.25■□□□□ 0.19
PBX1-219ENST00000560641 FCGR1AP12314 374 aa16.25■□□□□ 0.19
PBX1-219ENST00000560641 MATN1P21941 496 aa16.25■□□□□ 0.19
PBX1-219ENST00000560641 CDC20Q12834 499 aa16.25■□□□□ 0.19
PBX1-219ENST00000560641 CCDC14Q49A88 953 aa16.25■□□□□ 0.19
PBX1-219ENST00000560641 PPP6R3Q5H9R7 873 aaPredicted RBP16.25■□□□□ 0.19
PBX1-219ENST00000560641 MEX3CQ5U5Q3 659 aaKnown RBP16.25■□□□□ 0.19
PBX1-219ENST00000560641 TMEM198Q66K66 360 aa16.25■□□□□ 0.19
PBX1-219ENST00000560641 CMC1Q7Z7K0 106 aa16.25■□□□□ 0.19
PBX1-219ENST00000560641 RNF169Q8NCN4 708 aa16.25■□□□□ 0.19
PBX1-219ENST00000560641 RXFP2Q8WXD0 754 aa16.25■□□□□ 0.19
PBX1-219ENST00000560641 MUC3BQ9H195 1237 aa16.25■□□□□ 0.19
PBX1-219ENST00000560641 PARVBQ9HBI1 364 aa16.25■□□□□ 0.19
PBX1-219ENST00000560641 GABBR1Q9UBS5 961 aa16.25■□□□□ 0.19
PBX1-219ENST00000560641 KCNU1A8MYU2 1149 aa16.25■□□□□ 0.19
PBX1-219ENST00000560641 NFIBO00712 420 aa16.25■□□□□ 0.19
PBX1-219ENST00000560641 PSAPP07602 524 aa16.25■□□□□ 0.19
PBX1-219ENST00000560641 HSD17B1P14061 328 aa16.25■□□□□ 0.19
PBX1-219ENST00000560641 NFKBIAP25963 317 aa16.25■□□□□ 0.19
PBX1-219ENST00000560641 POLD2P49005 469 aa16.25■□□□□ 0.19
PBX1-219ENST00000560641 ITGADQ13349 1161 aa16.25■□□□□ 0.19
PBX1-219ENST00000560641 HSDL1Q3SXM5 330 aa16.25■□□□□ 0.19
PBX1-219ENST00000560641 CYBRD1Q53TN4 286 aa16.25■□□□□ 0.19
PBX1-219ENST00000560641 PARP8Q8N3A8 854 aa16.25■□□□□ 0.19
PBX1-219ENST00000560641 DHRS1Q96LJ7 313 aa16.25■□□□□ 0.19
PBX1-219ENST00000560641 ZC3H12CQ9C0D7 883 aaKnown RBP16.25■□□□□ 0.19
PBX1-219ENST00000560641 MUC13Q9H3R2 512 aa16.25■□□□□ 0.19
PBX1-219ENST00000560641 HMG20AQ9NP66 347 aa16.25■□□□□ 0.19
PBX1-219ENST00000560641 MICAL2O94851 1124 aa16.24■□□□□ 0.19
PBX1-219ENST00000560641 MGAT1P26572 445 aa16.24■□□□□ 0.19
PBX1-219ENST00000560641 RPL10P27635 214 aaKnown RBP16.24■□□□□ 0.19
PBX1-219ENST00000560641 IDUAP35475 653 aa16.24■□□□□ 0.19
PBX1-219ENST00000560641 GRIA3P42263 894 aa16.24■□□□□ 0.19
PBX1-219ENST00000560641 MLLT10P55197 1068 aa16.24■□□□□ 0.19
PBX1-219ENST00000560641 DNAJB13P59910 316 aa16.24■□□□□ 0.19
PBX1-219ENST00000560641 TRAF2Q12933 501 aa16.24■□□□□ 0.19
PBX1-219ENST00000560641 EMC2Q15006 297 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms