RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 MDM4O15151 490 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 KCNN4O15554 427 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 HNRNPRO43390 633 aaKnown RBP8.69□□□□□ -1.02
CCDC33-209ENST00000560565 PLIN3O60664 434 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 DNAJA2O60884 412 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 BCAS2O75934 225 aaPredicted RBP8.69□□□□□ -1.02
CCDC33-209ENST00000560565 PDE5AO76074 875 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 BMP10O95393 424 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 H6PDO95479 791 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 VNN1O95497 513 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 POLBP06746 335 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 CD48P09326 243 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 CXCL8P10145 99 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 FCGR1AP12314 374 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 NCF2P19878 526 aaPredicted RBP8.69□□□□□ -1.02
CCDC33-209ENST00000560565 ITGAXP20702 1163 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 CYP3A5P20815 502 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 SCNN1AP37088 669 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 GP5P40197 560 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 MAGEA3P43357 314 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 IDH3AP50213 366 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 CDH6P55285 790 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 MRPS5P82675 430 aaKnown RBP8.69□□□□□ -1.02
CCDC33-209ENST00000560565 HTRA4P83105 476 aaPredicted RBP8.69□□□□□ -1.02
CCDC33-209ENST00000560565 TXNL4AP83876 142 aaKnown RBP8.69□□□□□ -1.02
CCDC33-209ENST00000560565 SLC25A3Q00325 362 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 NHLH1Q02575 133 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 DLG1Q12959 904 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 PRKAA1Q13131 559 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 SEMA5AQ13591 1074 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 ZNF699Q32M78 642 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 SLC10A6Q3KNW5 377 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 NADK2Q4G0N4 442 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 MSS51Q4VC12 460 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 SFT2D3Q587I9 215 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 XKR4Q5GH76 650 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 SPANXN3Q5MJ09 141 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 SCARA3Q6AZY7 606 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 PDZD4Q76G19 769 aaPredicted RBP8.69□□□□□ -1.02
CCDC33-209ENST00000560565 GPR141Q7Z602 305 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 RTN4RL1Q86UN2 441 aaPredicted RBP8.69□□□□□ -1.02
CCDC33-209ENST00000560565 SMYD1Q8NB12 490 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 GLIS1Q8NBF1 620 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 MINDY2Q8NBR6 621 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 OR5B17Q8NGF7 314 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 TMEM40Q8WWA1 233 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 ISL2Q96A47 359 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 MCRS1Q96EZ8 462 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 NRBF2Q96F24 287 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 RMND5BQ96G75 393 aaPredicted RBP8.69□□□□□ -1.02
CCDC33-209ENST00000560565 PPP1R2P1Q96PQ5 205 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 RNF157Q96PX1 679 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 UHRF1Q96T88 793 aaPredicted RBP8.69□□□□□ -1.02
CCDC33-209ENST00000560565 APOL6Q9BWW8 343 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 OSBPL6Q9BZF3 934 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 RBM38Q9H0Z9 239 aaKnown RBP8.69□□□□□ -1.02
CCDC33-209ENST00000560565 TSPYL2Q9H2G4 693 aaPredicted RBP8.69□□□□□ -1.02
CCDC33-209ENST00000560565 CLK4Q9HAZ1 481 aaKnown RBP8.69□□□□□ -1.02
CCDC33-209ENST00000560565 TCF7L2Q9NQB0 619 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 FAIMQ9NVQ4 179 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 GIN1Q9NXP7 522 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 MOCS1Q9NZB8 636 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 COPG2Q9UBF2 871 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 SUCOQ9UBS9 1254 aaKnown RBP8.69□□□□□ -1.02
CCDC33-209ENST00000560565 ADAMTS6Q9UKP5 1117 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 ST3GAL5Q9UNP4 418 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 PIN4Q9Y237 131 aaKnown RBP8.69□□□□□ -1.02
CCDC33-209ENST00000560565 ZNF510Q9Y2H8 683 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 PTPRJQ12913 1337 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 PTPRDP23468 1912 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 A0A0J9YVX5 310 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 ARHGEF37A1IGU5 675 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 LINC01553A4QN01 128 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 RFXAPO00287 272 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 TRIM38O00635 465 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 VILLO15195 856 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 HDAC3O15379 428 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 MTSS1O43312 755 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 KLHL41O60662 606 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 ZNF623O75123 536 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 E2F6O75461 281 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 ARHGEF15O94989 841 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 CRTAMO95727 393 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 TFAP2AP05549 437 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 APRTP07741 180 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 SMIM18P0DKX4 95 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 KITP10721 976 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 VDRP11473 427 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 COL6A2P12110 1019 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 KCNE1P15382 129 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 PORP16435 677 aaPredicted RBP8.68□□□□□ -1.02
CCDC33-209ENST00000560565 CDH2P19022 906 aaPredicted RBP8.68□□□□□ -1.02
CCDC33-209ENST00000560565 PAX3P23760 479 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 PSMD8P48556 350 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 NUMBP49757 651 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 CSE1LP55060 971 aaKnown RBP8.68□□□□□ -1.02
CCDC33-209ENST00000560565 WNT7BP56706 349 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 ERVK-21P61565 698 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 RBP5P82980 135 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 TFAMQ00059 246 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms