RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 SAP25Q8TEE9 199 aa14.35□□□□□ -0.11
TPM1-223ENST00000560445 IFT43Q96FT9 208 aa14.35□□□□□ -0.11
TPM1-223ENST00000560445 GDAP1L1Q96MZ0 367 aa14.35□□□□□ -0.11
TPM1-223ENST00000560445 TNKS2Q9H2K2 1166 aa14.35□□□□□ -0.11
TPM1-223ENST00000560445 CCDC86Q9H6F5 360 aaKnown RBP14.35□□□□□ -0.11
TPM1-223ENST00000560445 ZNF212Q9UDV6 495 aa14.35□□□□□ -0.11
TPM1-223ENST00000560445 A0A1W2PQC6 194 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 A6NNZ2 444 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 K7ERQ8 282 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 NEMP1O14524 444 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 ENC1O14682 589 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 SMAD6O43541 496 aaKnown RBP14.34□□□□□ -0.11
TPM1-223ENST00000560445 TSPAN6O43657 245 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 LEFTY1O75610 366 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 RFPL3O75679 317 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 ZMPSTE24O75844 475 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 LRIG2O94898 1065 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 POP4O95707 220 aaKnown RBP14.34□□□□□ -0.11
TPM1-223ENST00000560445 IGSF6O95976 241 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 TOP3BO95985 862 aaKnown RBP14.34□□□□□ -0.11
TPM1-223ENST00000560445 WNT1P04628 370 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 CTSLP07711 333 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 ATXN1LP0C7T5 689 aaKnown RBP14.34□□□□□ -0.11
TPM1-223ENST00000560445 ADRB3P13945 408 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 PTMSP20962 102 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 EPHB2P29323 1055 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 SUOXP51687 545 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 IL9RQ01113 521 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 PTP4A2Q12974 167 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 SGCGQ13326 291 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 GRM3Q14832 879 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 ANO6Q4KMQ2 910 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 INO80DQ53TQ3 878 aaPredicted RBP14.34□□□□□ -0.11
TPM1-223ENST00000560445 ARSIQ5FYB1 569 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 SCYL2Q6P3W7 929 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 WDR59Q6PJI9 974 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 RTL3Q8N8U3 475 aaKnown RBP14.34□□□□□ -0.11
TPM1-223ENST00000560445 PNPLA1Q8N8W4 532 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 OR2AP1Q8NGE2 309 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 JOSD2Q8TAC2 188 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 ARHGEF2Q92974 986 aaKnown RBP14.34□□□□□ -0.11
TPM1-223ENST00000560445 IQCDQ96DY2 449 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 CNDP2Q96KP4 475 aaKnown RBP14.34□□□□□ -0.11
TPM1-223ENST00000560445 MCEEQ96PE7 176 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 EDEM3Q9BZQ6 932 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 ZDHHC6Q9H6R6 413 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 EBF2Q9HAK2 575 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 TMPRSS4Q9NRS4 437 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 ARHGAP20Q9P2F6 1191 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 DNAI1Q9UI46 699 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 BTBD3Q9Y2F9 522 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 SCINQ9Y6U3 715 aa14.34□□□□□ -0.11
TPM1-223ENST00000560445 FAM208BQ5VWN6 2430 aa14.33□□□□□ -0.12
TPM1-223ENST00000560445 NEMP2A6NFY4 417 aa14.33□□□□□ -0.12
TPM1-223ENST00000560445 GOLGA8CPA6NN73 597 aa14.33□□□□□ -0.12
TPM1-223ENST00000560445 H3BM21 787 aa14.33□□□□□ -0.12
TPM1-223ENST00000560445 KCNK3O14649 394 aa14.33□□□□□ -0.12
TPM1-223ENST00000560445 SLC31A1O15431 190 aa14.33□□□□□ -0.12
TPM1-223ENST00000560445 KDELR3O43731 214 aa14.33□□□□□ -0.12
TPM1-223ENST00000560445 RNF8O76064 485 aa14.33□□□□□ -0.12
TPM1-223ENST00000560445 THEGLP0DJG4 465 aa14.33□□□□□ -0.12
TPM1-223ENST00000560445 ARF5P84085 180 aa14.33□□□□□ -0.12
TPM1-223ENST00000560445 NCAPHQ15003 741 aa14.33□□□□□ -0.12
TPM1-223ENST00000560445 ASIC2Q16515 512 aa14.33□□□□□ -0.12
TPM1-223ENST00000560445 ZNF284Q2VY69 593 aa14.33□□□□□ -0.12
TPM1-223ENST00000560445 ZNF805Q5CZA5 627 aa14.33□□□□□ -0.12
TPM1-223ENST00000560445 KCNT1Q5JUK3 1230 aa14.33□□□□□ -0.12
TPM1-223ENST00000560445 SLCO6A1Q86UG4 719 aa14.33□□□□□ -0.12
TPM1-223ENST00000560445 VPS36Q86VN1 386 aa14.33□□□□□ -0.12
TPM1-223ENST00000560445 NLRP14Q86W24 1093 aa14.33□□□□□ -0.12
TPM1-223ENST00000560445 TMEM145Q8NBT3 493 aa14.33□□□□□ -0.12
TPM1-223ENST00000560445 CHST14Q8NCH0 376 aa14.33□□□□□ -0.12
TPM1-223ENST00000560445 DENND6BQ8NEG7 585 aa14.33□□□□□ -0.12
TPM1-223ENST00000560445 PCDHB18PQ96TA0 734 aa14.33□□□□□ -0.12
TPM1-223ENST00000560445 KLHL11Q9NVR0 708 aa14.33□□□□□ -0.12
TPM1-223ENST00000560445 NCKIPSDQ9NZQ3 722 aa14.33□□□□□ -0.12
TPM1-223ENST00000560445 WASF2Q9Y6W5 498 aa14.33□□□□□ -0.12
TPM1-223ENST00000560445 PLK4O00444 970 aa14.32□□□□□ -0.12
TPM1-223ENST00000560445 KRIT1O00522 736 aa14.32□□□□□ -0.12
TPM1-223ENST00000560445 TOR1BO14657 336 aa14.32□□□□□ -0.12
TPM1-223ENST00000560445 CCP110O43303 1012 aa14.32□□□□□ -0.12
TPM1-223ENST00000560445 BUB1O43683 1085 aa14.32□□□□□ -0.12
TPM1-223ENST00000560445 KRT37O76014 449 aa14.32□□□□□ -0.12
TPM1-223ENST00000560445 MYBL1P10243 752 aa14.32□□□□□ -0.12
TPM1-223ENST00000560445 GLDCP23378 1020 aa14.32□□□□□ -0.12
TPM1-223ENST00000560445 ZNF165P49910 485 aa14.32□□□□□ -0.12
TPM1-223ENST00000560445 METAP1P53582 386 aa14.32□□□□□ -0.12
TPM1-223ENST00000560445 TAS2R38P59533 333 aa14.32□□□□□ -0.12
TPM1-223ENST00000560445 TPI1P60174 286 aa14.32□□□□□ -0.12
TPM1-223ENST00000560445 SMAD1Q15797 465 aaKnown RBP14.32□□□□□ -0.12
TPM1-223ENST00000560445 SFMBT2Q5VUG0 894 aa14.32□□□□□ -0.12
TPM1-223ENST00000560445 CAVIN1Q6NZI2 390 aaKnown RBP14.32□□□□□ -0.12
TPM1-223ENST00000560445 KYAT3Q6YP21 454 aaKnown RBP14.32□□□□□ -0.12
TPM1-223ENST00000560445 TMC6Q7Z403 805 aa14.32□□□□□ -0.12
TPM1-223ENST00000560445 PHLDB2Q86SQ0 1253 aa14.32□□□□□ -0.12
TPM1-223ENST00000560445 GATAD2AQ86YP4 633 aa14.32□□□□□ -0.12
TPM1-223ENST00000560445 PSTKQ8IV42 348 aaKnown RBP14.32□□□□□ -0.12
TPM1-223ENST00000560445 MCOLN2Q8IZK6 566 aa14.32□□□□□ -0.12
TPM1-223ENST00000560445 EID2Q8N6I1 236 aa14.32□□□□□ -0.12
TPM1-223ENST00000560445 CCDC185Q8N715 623 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms