RNA–Protein interactions for RNA: ENST00000560428.1

TNFAIP2-206, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 773 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-206ENST00000560428 POLD3Q15054 466 aaPredicted RBP18.34■□□□□ 0.53
TNFAIP2-206ENST00000560428 FIGNQ5HY92 759 aa18.34■□□□□ 0.53
TNFAIP2-206ENST00000560428 SFMBT2Q5VUG0 894 aa18.34■□□□□ 0.53
TNFAIP2-206ENST00000560428 PLEKHA7Q6IQ23 1121 aa18.34■□□□□ 0.53
TNFAIP2-206ENST00000560428 SCYL2Q6P3W7 929 aa18.34■□□□□ 0.53
TNFAIP2-206ENST00000560428 OXR1Q8N573 874 aa18.34■□□□□ 0.53
TNFAIP2-206ENST00000560428 RTL3Q8N8U3 475 aaKnown RBP18.34■□□□□ 0.53
TNFAIP2-206ENST00000560428 GRIN3AQ8TCU5 1115 aa18.34■□□□□ 0.53
TNFAIP2-206ENST00000560428 GATA6Q92908 595 aa18.34■□□□□ 0.53
TNFAIP2-206ENST00000560428 NAP1L5Q96NT1 182 aaPredicted RBP18.34■□□□□ 0.53
TNFAIP2-206ENST00000560428 EPAS1Q99814 870 aa18.34■□□□□ 0.53
TNFAIP2-206ENST00000560428 HEPHQ9BQS7 1158 aa18.34■□□□□ 0.53
TNFAIP2-206ENST00000560428 TAS2R14Q9NYV8 317 aa18.34■□□□□ 0.53
TNFAIP2-206ENST00000560428 BTBD3Q9Y2F9 522 aa18.34■□□□□ 0.53
TNFAIP2-206ENST00000560428 FCF1Q9Y324 198 aaKnown RBP18.34■□□□□ 0.53
TNFAIP2-206ENST00000560428 COL5A1P20908 1838 aaPredicted RBP18.33■□□□□ 0.53
TNFAIP2-206ENST00000560428 TMEM8BA6NDV4 472 aa18.33■□□□□ 0.52
TNFAIP2-206ENST00000560428 WASH4PA8MWX3 477 aa18.33■□□□□ 0.52
TNFAIP2-206ENST00000560428 C1QTNF9BB2RNN3 333 aa18.33■□□□□ 0.52
TNFAIP2-206ENST00000560428 KDELR3O43731 214 aa18.33■□□□□ 0.52
TNFAIP2-206ENST00000560428 SERPINC1P01008 464 aa18.33■□□□□ 0.52
TNFAIP2-206ENST00000560428 C1QTNF9P0C862 333 aa18.33■□□□□ 0.52
TNFAIP2-206ENST00000560428 GZMAP12544 262 aa18.33■□□□□ 0.52
TNFAIP2-206ENST00000560428 ITGB7P26010 798 aa18.33■□□□□ 0.52
TNFAIP2-206ENST00000560428 EPHB2P29323 1055 aa18.33■□□□□ 0.52
TNFAIP2-206ENST00000560428 HTR7P34969 479 aa18.33■□□□□ 0.52
TNFAIP2-206ENST00000560428 ARRB1P49407 418 aaPredicted RBP18.33■□□□□ 0.52
TNFAIP2-206ENST00000560428 CCNHP51946 323 aaPredicted RBP18.33■□□□□ 0.52
TNFAIP2-206ENST00000560428 NEK3P51956 506 aa18.33■□□□□ 0.52
TNFAIP2-206ENST00000560428 TPM4P67936 248 aa18.33■□□□□ 0.52
TNFAIP2-206ENST00000560428 MAMLD1Q13495 774 aa18.33■□□□□ 0.52
TNFAIP2-206ENST00000560428 STAT4Q14765 748 aa18.33■□□□□ 0.52
TNFAIP2-206ENST00000560428 TMC6Q7Z403 805 aa18.33■□□□□ 0.52
TNFAIP2-206ENST00000560428 PYROXD2Q8N2H3 581 aa18.33■□□□□ 0.52
TNFAIP2-206ENST00000560428 CHCHD4Q8N4Q1 142 aa18.33■□□□□ 0.52
TNFAIP2-206ENST00000560428 LRIG1Q96JA1 1093 aa18.33■□□□□ 0.52
TNFAIP2-206ENST00000560428 HAUS4Q9H6D7 363 aa18.33■□□□□ 0.52
TNFAIP2-206ENST00000560428 KLK13Q9UKR3 277 aa18.33■□□□□ 0.52
TNFAIP2-206ENST00000560428 SYCE3A1L190 88 aa18.32■□□□□ 0.52
TNFAIP2-206ENST00000560428 EIF3CLB5ME19 914 aaKnown RBP18.32■□□□□ 0.52
TNFAIP2-206ENST00000560428 RNF103O00237 685 aa18.32■□□□□ 0.52
TNFAIP2-206ENST00000560428 FGF10O15520 208 aaPredicted RBP18.32■□□□□ 0.52
TNFAIP2-206ENST00000560428 DKK1O94907 266 aa18.32■□□□□ 0.52
TNFAIP2-206ENST00000560428 GSRP00390 522 aa18.32■□□□□ 0.52
TNFAIP2-206ENST00000560428 RXRGP48443 463 aa18.32■□□□□ 0.52
TNFAIP2-206ENST00000560428 DNA2P51530 1060 aa18.32■□□□□ 0.52
TNFAIP2-206ENST00000560428 YBEYP58557 167 aaPredicted RBP18.32■□□□□ 0.52
TNFAIP2-206ENST00000560428 IL9RQ01113 521 aa18.32■□□□□ 0.52
TNFAIP2-206ENST00000560428 OGDHQ02218 1023 aa18.32■□□□□ 0.52
TNFAIP2-206ENST00000560428 E4F1Q66K89 784 aaPredicted RBP18.32■□□□□ 0.52
TNFAIP2-206ENST00000560428 ZNF571Q7Z3V5 609 aaPredicted RBP18.32■□□□□ 0.52
TNFAIP2-206ENST00000560428 ZSCAN30Q86W11 494 aa18.32■□□□□ 0.52
TNFAIP2-206ENST00000560428 HORMAD1Q86X24 394 aa18.32■□□□□ 0.52
TNFAIP2-206ENST00000560428 TMEM145Q8NBT3 493 aa18.32■□□□□ 0.52
TNFAIP2-206ENST00000560428 OR2AP1Q8NGE2 309 aa18.32■□□□□ 0.52
TNFAIP2-206ENST00000560428 CASKIN2Q8WXE0 1202 aa18.32■□□□□ 0.52
TNFAIP2-206ENST00000560428 EIF3CQ99613 913 aaKnown RBP18.32■□□□□ 0.52
TNFAIP2-206ENST00000560428 CATSPERBQ9H7T0 1116 aa18.32■□□□□ 0.52
TNFAIP2-206ENST00000560428 TOR4AQ9NXH8 423 aa18.32■□□□□ 0.52
TNFAIP2-206ENST00000560428 HECAQ9UBI9 543 aaPredicted RBP18.32■□□□□ 0.52
TNFAIP2-206ENST00000560428 ACTL7AQ9Y615 435 aa18.32■□□□□ 0.52
TNFAIP2-206ENST00000560428 CACNA1BQ00975 2339 aa18.32■□□□□ 0.52
TNFAIP2-206ENST00000560428 ASPMQ8IZT6 3477 aa18.32■□□□□ 0.52
TNFAIP2-206ENST00000560428 AKAP13Q12802 2813 aa18.31■□□□□ 0.52
TNFAIP2-206ENST00000560428 A0A1W2PQU0 124 aa18.31■□□□□ 0.52
TNFAIP2-206ENST00000560428 TMCO5BA8MYB1 307 aa18.31■□□□□ 0.52
TNFAIP2-206ENST00000560428 TNFSF14O43557 240 aa18.31■□□□□ 0.52
TNFAIP2-206ENST00000560428 AP1G1O43747 822 aa18.31■□□□□ 0.52
TNFAIP2-206ENST00000560428 CREB3O43889 395 aa18.31■□□□□ 0.52
TNFAIP2-206ENST00000560428 ADRB3P13945 408 aa18.31■□□□□ 0.52
TNFAIP2-206ENST00000560428 PTMSP20962 102 aa18.31■□□□□ 0.52
TNFAIP2-206ENST00000560428 SNRPD1P62314 119 aaKnown RBP18.31■□□□□ 0.52
TNFAIP2-206ENST00000560428 KLHL30Q0D2K2 578 aa18.31■□□□□ 0.52
TNFAIP2-206ENST00000560428 SHBQ15464 509 aa18.31■□□□□ 0.52
TNFAIP2-206ENST00000560428 ZNF284Q2VY69 593 aa18.31■□□□□ 0.52
TNFAIP2-206ENST00000560428 PARP15Q460N3 678 aa18.31■□□□□ 0.52
TNFAIP2-206ENST00000560428 SLCO6A1Q86UG4 719 aa18.31■□□□□ 0.52
TNFAIP2-206ENST00000560428 UMODL1-AS1Q8N2C9 162 aa18.31■□□□□ 0.52
TNFAIP2-206ENST00000560428 KDF1Q8NAX2 398 aaPredicted RBP18.31■□□□□ 0.52
TNFAIP2-206ENST00000560428 SAP25Q8TEE9 199 aa18.31■□□□□ 0.52
TNFAIP2-206ENST00000560428 FNIP1Q8TF40 1166 aa18.31■□□□□ 0.52
TNFAIP2-206ENST00000560428 TRIM11Q96F44 468 aa18.31■□□□□ 0.52
TNFAIP2-206ENST00000560428 TM6SF2Q9BZW4 377 aa18.31■□□□□ 0.52
TNFAIP2-206ENST00000560428 NOL6Q9H6R4 1146 aaKnown RBP18.31■□□□□ 0.52
TNFAIP2-206ENST00000560428 ZDHHC6Q9H6R6 413 aa18.31■□□□□ 0.52
TNFAIP2-206ENST00000560428 CBX8Q9HC52 389 aa18.31■□□□□ 0.52
TNFAIP2-206ENST00000560428 DONSONQ9NYP3 566 aa18.31■□□□□ 0.52
TNFAIP2-206ENST00000560428 SPEGQ15772 3267 aa18.31■□□□□ 0.52
TNFAIP2-206ENST00000560428 A0A1W2PQJ5 194 aa18.3■□□□□ 0.52
TNFAIP2-206ENST00000560428 TMEM191CA6NGB0 347 aa18.3■□□□□ 0.52
TNFAIP2-206ENST00000560428 DDX3XO00571 662 aaKnown RBP eCLIP18.3■□□□□ 0.52
TNFAIP2-206ENST00000560428 PSMA2P25787 234 aa18.3■□□□□ 0.52
TNFAIP2-206ENST00000560428 EPHA8P29322 1005 aaPredicted RBP18.3■□□□□ 0.52
TNFAIP2-206ENST00000560428 TMEM259Q4ZIN3 620 aa18.3■□□□□ 0.52
TNFAIP2-206ENST00000560428 INO80DQ53TQ3 878 aaPredicted RBP18.3■□□□□ 0.52
TNFAIP2-206ENST00000560428 KIAA1161Q6NSJ0 714 aa18.3■□□□□ 0.52
TNFAIP2-206ENST00000560428 FBXL19Q6PCT2 694 aa18.3■□□□□ 0.52
TNFAIP2-206ENST00000560428 SPATS2Q86XZ4 545 aaKnown RBP18.3■□□□□ 0.52
TNFAIP2-206ENST00000560428 PNPLA1Q8N8W4 532 aa18.3■□□□□ 0.52
TNFAIP2-206ENST00000560428 OSBPL1AQ9BXW6 950 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms