RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 ZNF394Q53GI3 561 aa10.53□□□□□ -0.72
APH1B-208ENST00000560353 ARHGAP17Q68EM7 881 aa10.53□□□□□ -0.72
APH1B-208ENST00000560353 KIAA1161Q6NSJ0 714 aa10.53□□□□□ -0.72
APH1B-208ENST00000560353 LVRNQ6Q4G3 990 aa10.53□□□□□ -0.72
APH1B-208ENST00000560353 Q6ZVU0 165 aa10.53□□□□□ -0.72
APH1B-208ENST00000560353 RBFAQ8N0V3 343 aa10.53□□□□□ -0.72
APH1B-208ENST00000560353 SIX6OS1Q8N1H7 587 aa10.53□□□□□ -0.72
APH1B-208ENST00000560353 IL22RA1Q8N6P7 574 aa10.53□□□□□ -0.72
APH1B-208ENST00000560353 TMIEQ8NEW7 156 aa10.53□□□□□ -0.72
APH1B-208ENST00000560353 GOLGA5Q8TBA6 731 aa10.53□□□□□ -0.72
APH1B-208ENST00000560353 MOCOSQ96EN8 888 aa10.53□□□□□ -0.72
APH1B-208ENST00000560353 FEM1CQ96JP0 617 aa10.53□□□□□ -0.72
APH1B-208ENST00000560353 HDAC8Q9BY41 377 aa10.53□□□□□ -0.72
APH1B-208ENST00000560353 PANK2Q9BZ23 570 aa10.53□□□□□ -0.72
APH1B-208ENST00000560353 NIF3L1Q9GZT8 377 aa10.53□□□□□ -0.72
APH1B-208ENST00000560353 NUCKS1Q9H1E3 243 aaKnown RBP10.53□□□□□ -0.72
APH1B-208ENST00000560353 PRDM8Q9NQV8 689 aa10.53□□□□□ -0.72
APH1B-208ENST00000560353 SLC25A13Q9UJS0 675 aa10.53□□□□□ -0.72
APH1B-208ENST00000560353 AGRPO00253 132 aa10.52□□□□□ -0.73
APH1B-208ENST00000560353 BNIP3LO60238 219 aa10.52□□□□□ -0.73
APH1B-208ENST00000560353 CNTN5O94779 1100 aa10.52□□□□□ -0.73
APH1B-208ENST00000560353 PDGFRAP16234 1089 aa10.52□□□□□ -0.73
APH1B-208ENST00000560353 TSHRP16473 764 aa10.52□□□□□ -0.73
APH1B-208ENST00000560353 CHRNA3P32297 505 aa10.52□□□□□ -0.73
APH1B-208ENST00000560353 THOP1P52888 689 aa10.52□□□□□ -0.73
APH1B-208ENST00000560353 DLG4P78352 724 aa10.52□□□□□ -0.73
APH1B-208ENST00000560353 SGCGQ13326 291 aa10.52□□□□□ -0.73
APH1B-208ENST00000560353 FAM26FQ5R3K3 315 aa10.52□□□□□ -0.73
APH1B-208ENST00000560353 FAXCQ5TGI0 409 aa10.52□□□□□ -0.73
APH1B-208ENST00000560353 ERN2Q76MJ5 926 aaKnown RBP10.52□□□□□ -0.73
APH1B-208ENST00000560353 ZSCAN30Q86W11 494 aa10.52□□□□□ -0.73
APH1B-208ENST00000560353 FAM114A1Q8IWE2 563 aa10.52□□□□□ -0.73
APH1B-208ENST00000560353 PHACTR4Q8IZ21 702 aa10.52□□□□□ -0.73
APH1B-208ENST00000560353 LGI2Q8N0V4 545 aa10.52□□□□□ -0.73
APH1B-208ENST00000560353 SCML4Q8N228 414 aa10.52□□□□□ -0.73
APH1B-208ENST00000560353 FSTL5Q8N475 847 aaPredicted RBP10.52□□□□□ -0.73
APH1B-208ENST00000560353 CCDC150Q8NCX0 1101 aa10.52□□□□□ -0.73
APH1B-208ENST00000560353 CCDC114Q96M63 670 aa10.52□□□□□ -0.73
APH1B-208ENST00000560353 LENG8Q96PV6 779 aaPredicted RBP10.52□□□□□ -0.73
APH1B-208ENST00000560353 LRRC61Q9BV99 259 aa10.52□□□□□ -0.73
APH1B-208ENST00000560353 TCEAL2Q9H3H9 227 aaPredicted RBP10.52□□□□□ -0.73
APH1B-208ENST00000560353 APOBEC3GQ9HC16 384 aaKnown RBP10.52□□□□□ -0.73
APH1B-208ENST00000560353 CNGB3Q9NQW8 809 aa10.52□□□□□ -0.73
APH1B-208ENST00000560353 FBXO2Q9UK22 296 aaPredicted RBP10.52□□□□□ -0.73
APH1B-208ENST00000560353 DOLKQ9UPQ8 538 aa10.52□□□□□ -0.73
APH1B-208ENST00000560353 NAALADL1Q9UQQ1 740 aa10.52□□□□□ -0.73
APH1B-208ENST00000560353 SRPRBQ9Y5M8 271 aaKnown RBP10.52□□□□□ -0.73
APH1B-208ENST00000560353 TULP2O00295 520 aa10.51□□□□□ -0.73
APH1B-208ENST00000560353 RAD51BO15315 384 aa10.51□□□□□ -0.73
APH1B-208ENST00000560353 NKX2-8O15522 239 aa10.51□□□□□ -0.73
APH1B-208ENST00000560353 PRNPP04156 253 aa10.51□□□□□ -0.73
APH1B-208ENST00000560353 RNF224P0DH78 156 aa10.51□□□□□ -0.73
APH1B-208ENST00000560353 DAOAP59103 153 aa10.51□□□□□ -0.73
APH1B-208ENST00000560353 PFN3P60673 137 aa10.51□□□□□ -0.73
APH1B-208ENST00000560353 ELOCQ15369 112 aa10.51□□□□□ -0.73
APH1B-208ENST00000560353 KNOP1Q1ED39 458 aaKnown RBP10.51□□□□□ -0.73
APH1B-208ENST00000560353 TPRG1LQ5T0D9 272 aa10.51□□□□□ -0.73
APH1B-208ENST00000560353 PHF19Q5T6S3 580 aa10.51□□□□□ -0.73
APH1B-208ENST00000560353 BRAPQ7Z569 592 aa10.51□□□□□ -0.73
APH1B-208ENST00000560353 CCNJLQ8IV13 435 aa10.51□□□□□ -0.73
APH1B-208ENST00000560353 KYQ8NBH2 561 aa10.51□□□□□ -0.73
APH1B-208ENST00000560353 SLC4A11Q8NBS3 891 aa10.51□□□□□ -0.73
APH1B-208ENST00000560353 PPP1R16AQ96I34 528 aa10.51□□□□□ -0.73
APH1B-208ENST00000560353 SLC45A3Q96JT2 553 aa10.51□□□□□ -0.73
APH1B-208ENST00000560353 FCRL2Q96LA5 508 aaPredicted RBP10.51□□□□□ -0.73
APH1B-208ENST00000560353 TAAR9Q96RI9 348 aa10.51□□□□□ -0.73
APH1B-208ENST00000560353 HAPLN3Q96S86 360 aa10.51□□□□□ -0.73
APH1B-208ENST00000560353 KLF6Q99612 283 aaPredicted RBP10.51□□□□□ -0.73
APH1B-208ENST00000560353 BACH2Q9BYV9 841 aa10.51□□□□□ -0.73
APH1B-208ENST00000560353 CLPBQ9H078 707 aa10.51□□□□□ -0.73
APH1B-208ENST00000560353 TNMDQ9H2S6 317 aa10.51□□□□□ -0.73
APH1B-208ENST00000560353 SIRPGQ9P1W8 387 aa10.51□□□□□ -0.73
APH1B-208ENST00000560353 TLR6Q9Y2C9 796 aa10.51□□□□□ -0.73
APH1B-208ENST00000560353 PCDHGA3Q9Y5H0 932 aa10.51□□□□□ -0.73
APH1B-208ENST00000560353 RNF215Q9Y6U7 377 aa10.51□□□□□ -0.73
APH1B-208ENST00000560353 NYNRINQ9P2P1 1898 aaKnown RBP10.51□□□□□ -0.73
APH1B-208ENST00000560353 EFCAB7A8K855 629 aa10.5□□□□□ -0.73
APH1B-208ENST00000560353 CTSLP07711 333 aa10.5□□□□□ -0.73
APH1B-208ENST00000560353 ALPIP09923 528 aa10.5□□□□□ -0.73
APH1B-208ENST00000560353 UGT1A3P35503 534 aa10.5□□□□□ -0.73
APH1B-208ENST00000560353 NUMBP49757 651 aa10.5□□□□□ -0.73
APH1B-208ENST00000560353 BLKP51451 505 aa10.5□□□□□ -0.73
APH1B-208ENST00000560353 RAD23BP54727 409 aa10.5□□□□□ -0.73
APH1B-208ENST00000560353 AMPD3Q01432 767 aa10.5□□□□□ -0.73
APH1B-208ENST00000560353 BST2Q10589 180 aaKnown RBP10.5□□□□□ -0.73
APH1B-208ENST00000560353 NNTQ13423 1086 aa10.5□□□□□ -0.73
APH1B-208ENST00000560353 GOLGA7BQ2TAP0 167 aa10.5□□□□□ -0.73
APH1B-208ENST00000560353 C1QL3Q5VWW1 255 aa10.5□□□□□ -0.73
APH1B-208ENST00000560353 CACNA2D3Q8IZS8 1091 aa10.5□□□□□ -0.73
APH1B-208ENST00000560353 SH2D3CQ8N5H7 860 aa10.5□□□□□ -0.73
APH1B-208ENST00000560353 Q8N9G6 341 aaPredicted RBP10.5□□□□□ -0.73
APH1B-208ENST00000560353 IRGQQ8WZA9 623 aa10.5□□□□□ -0.73
APH1B-208ENST00000560353 CLIC6Q96NY7 704 aa10.5□□□□□ -0.73
APH1B-208ENST00000560353 SERPINB11Q96P15 392 aa10.5□□□□□ -0.73
APH1B-208ENST00000560353 FEM1AQ9BSK4 669 aa10.5□□□□□ -0.73
APH1B-208ENST00000560353 C1QTNF2Q9BXJ5 285 aa10.5□□□□□ -0.73
APH1B-208ENST00000560353 DONSONQ9NYP3 566 aa10.5□□□□□ -0.73
APH1B-208ENST00000560353 DKK3Q9UBP4 350 aa10.5□□□□□ -0.73
APH1B-208ENST00000560353 HESX1Q9UBX0 185 aa10.5□□□□□ -0.73
APH1B-208ENST00000560353 APPL1Q9UKG1 709 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms