RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 PCDHA3Q9Y5H8 950 aa17.12■□□□□ 0.33
RPL28-209ENST00000560055 CAPN6Q9Y6Q1 641 aa17.12■□□□□ 0.33
RPL28-209ENST00000560055 WASF2Q9Y6W5 498 aa17.12■□□□□ 0.33
RPL28-209ENST00000560055 NUMA1Q14980 2115 aa17.12■□□□□ 0.33
RPL28-209ENST00000560055 GON4LQ3T8J9 2241 aa17.11■□□□□ 0.33
RPL28-209ENST00000560055 RNF103O00237 685 aa17.11■□□□□ 0.33
RPL28-209ENST00000560055 NRDCO43847 1150 aa17.11■□□□□ 0.33
RPL28-209ENST00000560055 BNIP3LO60238 219 aa17.11■□□□□ 0.33
RPL28-209ENST00000560055 PALMO75781 387 aa17.11■□□□□ 0.33
RPL28-209ENST00000560055 IL1BP01584 269 aa17.11■□□□□ 0.33
RPL28-209ENST00000560055 CTNNA2P26232 953 aa17.11■□□□□ 0.33
RPL28-209ENST00000560055 DRD3P35462 400 aa17.11■□□□□ 0.33
RPL28-209ENST00000560055 RECQLP46063 649 aaPredicted RBP17.11■□□□□ 0.33
RPL28-209ENST00000560055 PEX5P50542 639 aa17.11■□□□□ 0.33
RPL28-209ENST00000560055 CCNHP51946 323 aaPredicted RBP17.11■□□□□ 0.33
RPL28-209ENST00000560055 GBE1Q04446 702 aa17.11■□□□□ 0.33
RPL28-209ENST00000560055 SLC10A2Q12908 348 aaPredicted RBP17.11■□□□□ 0.33
RPL28-209ENST00000560055 RFTN1Q14699 578 aaPredicted RBP17.11■□□□□ 0.33
RPL28-209ENST00000560055 ELF2Q15723 593 aa17.11■□□□□ 0.33
RPL28-209ENST00000560055 FAM46CQ5VWP2 391 aa17.11■□□□□ 0.33
RPL28-209ENST00000560055 LAIR1Q6GTX8 287 aa17.11■□□□□ 0.33
RPL28-209ENST00000560055 LRRC49Q8IUZ0 686 aa17.11■□□□□ 0.33
RPL28-209ENST00000560055 TMIEQ8NEW7 156 aa17.11■□□□□ 0.33
RPL28-209ENST00000560055 EXD1Q8NHP7 514 aa17.11■□□□□ 0.33
RPL28-209ENST00000560055 PIP4K2CQ8TBX8 421 aa17.11■□□□□ 0.33
RPL28-209ENST00000560055 TOE1Q96GM8 510 aaKnown RBP17.11■□□□□ 0.33
RPL28-209ENST00000560055 LOXL4Q96JB6 756 aa17.11■□□□□ 0.33
RPL28-209ENST00000560055 ZNF599Q96NL3 588 aa17.11■□□□□ 0.33
RPL28-209ENST00000560055 SP110Q9HB58 689 aa17.11■□□□□ 0.33
RPL28-209ENST00000560055 DTLQ9NZJ0 730 aa17.11■□□□□ 0.33
RPL28-209ENST00000560055 IL36AQ9UHA7 158 aa17.11■□□□□ 0.33
RPL28-209ENST00000560055 RAB23Q9ULC3 237 aa17.11■□□□□ 0.33
RPL28-209ENST00000560055 FZD4Q9ULV1 537 aa17.11■□□□□ 0.33
RPL28-209ENST00000560055 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.11■□□□□ 0.33
RPL28-209ENST00000560055 FARP1Q9Y4F1 1045 aaPredicted RBP17.11■□□□□ 0.33
RPL28-209ENST00000560055 A0A1W2PP55 124 aa17.1■□□□□ 0.33
RPL28-209ENST00000560055 CCDC66A2RUB6 948 aa17.1■□□□□ 0.33
RPL28-209ENST00000560055 C10orf142B7Z368 130 aa17.1■□□□□ 0.33
RPL28-209ENST00000560055 C1QTNF3-AMACRE9PGA6 284 aa17.1■□□□□ 0.33
RPL28-209ENST00000560055 KRT86O43790 486 aa17.1■□□□□ 0.33
RPL28-209ENST00000560055 RHOBTB1O94844 696 aa17.1■□□□□ 0.33
RPL28-209ENST00000560055 ZRANB2O95218 330 aaKnown RBP eCLIP17.1■□□□□ 0.33
RPL28-209ENST00000560055 PRNPP04156 253 aa17.1■□□□□ 0.33
RPL28-209ENST00000560055 GARSP41250 739 aaKnown RBP17.1■□□□□ 0.33
RPL28-209ENST00000560055 SNRPD1P62314 119 aaKnown RBP17.1■□□□□ 0.33
RPL28-209ENST00000560055 ATXN7L2Q5T6C5 722 aaPredicted RBP17.1■□□□□ 0.33
RPL28-209ENST00000560055 SPOCD1Q6ZMY3 1216 aa17.1■□□□□ 0.33
RPL28-209ENST00000560055 KIAA2013Q8IYS2 634 aa17.1■□□□□ 0.33
RPL28-209ENST00000560055 RCOR2Q8IZ40 523 aa17.1■□□□□ 0.33
RPL28-209ENST00000560055 SYCE1Q8N0S2 351 aa17.1■□□□□ 0.33
RPL28-209ENST00000560055 ATPAF2Q8N5M1 289 aa17.1■□□□□ 0.33
RPL28-209ENST00000560055 HEPHQ9BQS7 1158 aa17.1■□□□□ 0.33
RPL28-209ENST00000560055 KCNF1Q9H3M0 494 aa17.1■□□□□ 0.33
RPL28-209ENST00000560055 FBXL12Q9NXK8 326 aa17.1■□□□□ 0.33
RPL28-209ENST00000560055 CEP250Q9BV73 2442 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 hCG_1818297A0A087WSY0 165 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 APOL1O14791 398 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 LEFTY1O75610 366 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 ZFXP17010 805 aaPredicted RBP17.09■□□□□ 0.33
RPL28-209ENST00000560055 ACSL1P33121 698 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 DNA2P51530 1060 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 RHOAP61586 193 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 RPL6Q02878 288 aaKnown RBP17.09■□□□□ 0.33
RPL28-209ENST00000560055 SFSWAPQ12872 951 aaKnown RBP17.09■□□□□ 0.33
RPL28-209ENST00000560055 PPP2R5EQ16537 467 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 MYLK3Q32MK0 819 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 ODF2Q5BJF6 829 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 ARSIQ5FYB1 569 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 TFDP3Q5H9I0 405 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 TMCO4Q5TGY1 634 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 LPCAT2Q7L5N7 544 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 PEX26Q7Z412 305 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 FAM124AQ86V42 546 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 TMEFF1Q8IYR6 380 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 TSEN2Q8NCE0 465 aaKnown RBP17.09■□□□□ 0.33
RPL28-209ENST00000560055 GRIN3AQ8TCU5 1115 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 ALG3Q92685 438 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 FATE1Q969F0 183 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 ZNF419Q96HQ0 510 aaPredicted RBP17.09■□□□□ 0.33
RPL28-209ENST00000560055 RBM41Q96IZ5 413 aaKnown RBP17.09■□□□□ 0.33
RPL28-209ENST00000560055 LRIG1Q96JA1 1093 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 GDAP1L1Q96MZ0 367 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 TSGA13Q96PP4 275 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 PSKH2Q96QS6 385 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 HINFPQ9BQA5 517 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 MAK16Q9BXY0 300 aaKnown RBP17.09■□□□□ 0.33
RPL28-209ENST00000560055 BTBD1Q9H0C5 482 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 NEUROG2Q9H2A3 272 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 SGK2Q9HBY8 427 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 GUCA1BQ9UMX6 200 aa17.09■□□□□ 0.33
RPL28-209ENST00000560055 THADAQ6YHU6 1953 aa17.08■□□□□ 0.33
RPL28-209ENST00000560055 MUSKO15146 869 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 MAP3K13O43283 966 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 RNASEH2AO75792 299 aaKnown RBP17.08■□□□□ 0.32
RPL28-209ENST00000560055 EPN2O95208 641 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 MAP3K6O95382 1288 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 POP4O95707 220 aaKnown RBP17.08■□□□□ 0.32
RPL28-209ENST00000560055 IGSF6O95976 241 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 RETP07949 1114 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms