RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 CSO75390 466 aaKnown RBP9.35□□□□□ -0.91
HDDC3-204ENST00000559834 DXOO77932 396 aaKnown RBP9.35□□□□□ -0.91
HDDC3-204ENST00000559834 MPOP05164 745 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 GIMD1P0DJR0 217 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 ADRB3P13945 408 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 NME1P15531 152 aaKnown RBP9.35□□□□□ -0.91
HDDC3-204ENST00000559834 ITGB7P26010 798 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 RBMS1P29558 406 aaKnown RBP9.35□□□□□ -0.91
HDDC3-204ENST00000559834 GABRB2P47870 512 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 RPIAP49247 311 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 SERPINH1P50454 418 aaKnown RBP9.35□□□□□ -0.91
HDDC3-204ENST00000559834 GEMIN4P57678 1058 aaKnown RBP9.35□□□□□ -0.91
HDDC3-204ENST00000559834 TMPRSS3P57727 454 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 GABREP78334 506 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 RHDQ02161 417 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 APBA1Q02410 837 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 GNA12Q03113 381 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 PTK2BQ14289 1009 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 TAF1BQ53T94 588 aaPredicted RBP9.35□□□□□ -0.91
HDDC3-204ENST00000559834 ZNF542PQ5EBM4 170 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 FAM102AQ5T9C2 384 aaPredicted RBP9.35□□□□□ -0.91
HDDC3-204ENST00000559834 SEL1L3Q68CR1 1132 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 ZCCHC8Q6NZY4 707 aaKnown RBP9.35□□□□□ -0.91
HDDC3-204ENST00000559834 KYAT3Q6YP21 454 aaKnown RBP9.35□□□□□ -0.91
HDDC3-204ENST00000559834 GCNT7Q6ZNI0 430 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 PTAR1Q7Z6K3 402 aaPredicted RBP9.35□□□□□ -0.91
HDDC3-204ENST00000559834 TFAP2DQ7Z6R9 452 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 PARGQ86W56 976 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 FAM114A1Q8IWE2 563 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 FAM71AQ8IYT1 594 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 SLC22A18ASQ8N1D0 253 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 MLKLQ8NB16 471 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 OR7D4Q8NG98 312 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 BTN2A2Q8WVV5 523 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 ASB12Q8WXK4 309 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 GLMNQ92990 594 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 RAB7BQ96AH8 199 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 ARHGEF26Q96DR7 871 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 CCDC97Q96F63 343 aaPredicted RBP9.35□□□□□ -0.91
HDDC3-204ENST00000559834 WBP1Q96G27 269 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 HIC2Q96JB3 615 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 BMFQ96LC9 184 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 LENG8Q96PV6 779 aaPredicted RBP9.35□□□□□ -0.91
HDDC3-204ENST00000559834 TBCBQ99426 244 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 IL12RB2Q99665 862 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 C1QTNF2Q9BXJ5 285 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 DPH1Q9BZG8 443 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 ZYG11BQ9C0D3 744 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 ATP13A1Q9HD20 1204 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 PLCB1Q9NQ66 1216 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 THSD1Q9NS62 852 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 KIAA1468Q9P260 1216 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 PPARGC1AQ9UBK2 798 aaKnown RBP9.35□□□□□ -0.91
HDDC3-204ENST00000559834 SALL4Q9UJQ4 1053 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 HPCAL4Q9UM19 191 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 PCDHB1Q9Y5F3 818 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 FADS3Q9Y5Q0 445 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 SNX10Q9Y5X0 201 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 TP53BP1Q12888 1972 aaPredicted RBP9.35□□□□□ -0.91
HDDC3-204ENST00000559834 DOCK9Q9BZ29 2069 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 MYLKQ15746 1914 aa9.35□□□□□ -0.91
HDDC3-204ENST00000559834 CPED1A4D0V7 1026 aa9.34□□□□□ -0.91
HDDC3-204ENST00000559834 POM121BA6NF01 834 aa9.34□□□□□ -0.91
HDDC3-204ENST00000559834 ZNF821O75541 412 aaPredicted RBP9.34□□□□□ -0.91
HDDC3-204ENST00000559834 ZMPSTE24O75844 475 aa9.34□□□□□ -0.91
HDDC3-204ENST00000559834 POP4O95707 220 aaKnown RBP9.34□□□□□ -0.91
HDDC3-204ENST00000559834 CYP11B1P15538 503 aa9.34□□□□□ -0.91
HDDC3-204ENST00000559834 JUNDP17535 347 aa9.34□□□□□ -0.91
HDDC3-204ENST00000559834 TFE3P19532 575 aaPredicted RBP9.34□□□□□ -0.91
HDDC3-204ENST00000559834 CDH5P33151 784 aaPredicted RBP9.34□□□□□ -0.91
HDDC3-204ENST00000559834 CCNHP51946 323 aaPredicted RBP9.34□□□□□ -0.91
HDDC3-204ENST00000559834 CFHR1Q03591 330 aa9.34□□□□□ -0.91
HDDC3-204ENST00000559834 FZD2Q14332 565 aa9.34□□□□□ -0.91
HDDC3-204ENST00000559834 DRAP1Q14919 205 aaPredicted RBP9.34□□□□□ -0.91
HDDC3-204ENST00000559834 POLD3Q15054 466 aaPredicted RBP9.34□□□□□ -0.91
HDDC3-204ENST00000559834 MAN2A1Q16706 1144 aa9.34□□□□□ -0.91
HDDC3-204ENST00000559834 ISXQ2M1V0 245 aa9.34□□□□□ -0.91
HDDC3-204ENST00000559834 ARL13BQ3SXY8 428 aa9.34□□□□□ -0.91
HDDC3-204ENST00000559834 OTUD1Q5VV17 481 aaPredicted RBP9.34□□□□□ -0.91
HDDC3-204ENST00000559834 ARCQ7LC44 396 aa9.34□□□□□ -0.91
HDDC3-204ENST00000559834 RYBPQ8N488 228 aaPredicted RBP9.34□□□□□ -0.91
HDDC3-204ENST00000559834 IFI44Q8TCB0 444 aa9.34□□□□□ -0.91
HDDC3-204ENST00000559834 KCNE4Q8WWG9 221 aa9.34□□□□□ -0.91
HDDC3-204ENST00000559834 ISG20Q96AZ6 181 aaKnown RBP9.34□□□□□ -0.91
HDDC3-204ENST00000559834 NAF1Q96HR8 494 aaKnown RBP9.34□□□□□ -0.91
HDDC3-204ENST00000559834 NDST4Q9H3R1 872 aa9.34□□□□□ -0.91
HDDC3-204ENST00000559834 SIX2Q9NPC8 291 aa9.34□□□□□ -0.91
HDDC3-204ENST00000559834 ANLNQ9NQW6 1124 aa9.34□□□□□ -0.91
HDDC3-204ENST00000559834 GPR27Q9NS67 375 aa9.34□□□□□ -0.91
HDDC3-204ENST00000559834 HECAQ9UBI9 543 aaPredicted RBP9.34□□□□□ -0.91
HDDC3-204ENST00000559834 SPASTQ9UBP0 616 aa9.34□□□□□ -0.91
HDDC3-204ENST00000559834 WASF2Q9Y6W5 498 aa9.34□□□□□ -0.91
HDDC3-204ENST00000559834 TRPM6Q9BX84 2022 aa9.34□□□□□ -0.91
HDDC3-204ENST00000559834 FREM2Q5SZK8 3169 aa9.34□□□□□ -0.91
HDDC3-204ENST00000559834 TDRD6O60522 2096 aaKnown RBP9.33□□□□□ -0.92
HDDC3-204ENST00000559834 EME2A4GXA9 379 aaPredicted RBP9.33□□□□□ -0.92
HDDC3-204ENST00000559834 IGLON5A6NGN9 336 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 I6L893 689 aaPredicted RBP9.33□□□□□ -0.92
HDDC3-204ENST00000559834 TOR1BO14657 336 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 KLK10O43240 276 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms