RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 EIF4A3P38919 411 aaKnown RBP8.34□□□□□ -1.07
SNX1-207ENST00000559401 CCR5P51681 352 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 NEK3P51956 506 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 YBEYP58557 167 aaPredicted RBP8.34□□□□□ -1.07
SNX1-207ENST00000559401 SNRPD1P62314 119 aaKnown RBP8.34□□□□□ -1.07
SNX1-207ENST00000559401 RACK1P63244 317 aaKnown RBP8.34□□□□□ -1.07
SNX1-207ENST00000559401 RAD51Q06609 339 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 FOXC1Q12948 553 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 SEMA3BQ13214 749 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 CA9Q16790 459 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 KIF19Q2TAC6 998 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 SMTNL2Q2TAL5 461 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 HLA-BQ31612 363 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 PARP15Q460N3 678 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 SETMARQ53H47 684 aaPredicted RBP8.34□□□□□ -1.07
SNX1-207ENST00000559401 ATXN7L2Q5T6C5 722 aaPredicted RBP8.34□□□□□ -1.07
SNX1-207ENST00000559401 AGBL4Q5VU57 503 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 FBXL19Q6PCT2 694 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 ERN2Q76MJ5 926 aaKnown RBP8.34□□□□□ -1.07
SNX1-207ENST00000559401 NAXDQ8IW45 347 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 PAF1Q8N7H5 531 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 NETO2Q8NC67 525 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 OR2AP1Q8NGE2 309 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 C1orf216Q8TAB5 229 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 FNIP1Q8TF40 1166 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 HSPH1Q92598 858 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 KLK6Q92876 244 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 HMCESQ96FZ2 354 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 BTBD6Q96KE9 485 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 GDAP1L1Q96MZ0 367 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 KCTD15Q96SI1 283 aaPredicted RBP8.34□□□□□ -1.07
SNX1-207ENST00000559401 NCAPGQ9BPX3 1015 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 NUP85Q9BW27 656 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 KDM4CQ9H3R0 1056 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 PREBQ9HCU5 417 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 OSGEPQ9NPF4 335 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 TM7SF3Q9NS93 570 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.34□□□□□ -1.07
SNX1-207ENST00000559401 DNAAF2Q9NVR5 837 aaKnown RBP8.34□□□□□ -1.07
SNX1-207ENST00000559401 DONSONQ9NYP3 566 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 ARHGAP20Q9P2F6 1191 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 TPX2Q9ULW0 747 aaKnown RBP8.34□□□□□ -1.07
SNX1-207ENST00000559401 ANKRD6Q9Y2G4 727 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 FNDC3AQ9Y2H6 1198 aaKnown RBP8.34□□□□□ -1.07
SNX1-207ENST00000559401 PCDHB9Q9Y5E1 797 aa8.34□□□□□ -1.07
SNX1-207ENST00000559401 CNOT1A5YKK6 2376 aaKnown RBP8.33□□□□□ -1.08
SNX1-207ENST00000559401 A0A1W2PQU0 124 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 ARHGAP42A6NI28 874 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 EIF3CLB5ME19 914 aaKnown RBP8.33□□□□□ -1.08
SNX1-207ENST00000559401 H3BRJ5 948 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 DFFAO00273 331 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 NEMP1O14524 444 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 KCNK3O14649 394 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 VILLO15195 856 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 SLC31A1O15431 190 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 AKR1B10O60218 316 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 SH3BP5O60239 455 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 GSRP00390 522 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 UGT2B4P06133 528 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 CD59P13987 128 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 PRLRP16471 622 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 ERCC2P18074 760 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 GKP32189 559 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 ARL4AP40617 200 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 CCT8P50990 548 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 SIM1P81133 766 aaPredicted RBP8.33□□□□□ -1.08
SNX1-207ENST00000559401 IL9RQ01113 521 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 BNC1Q01954 994 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 SLC14A1Q13336 389 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 MAPK8IP2Q13387 824 aaPredicted RBP8.33□□□□□ -1.08
SNX1-207ENST00000559401 SERINC3Q13530 473 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 PIGHQ14442 188 aaPredicted RBP8.33□□□□□ -1.08
SNX1-207ENST00000559401 KRT81Q14533 505 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 STAT4Q14765 748 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 ACAP1Q15027 740 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 KCNT1Q5JUK3 1230 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 PIP5KL1Q5T9C9 394 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 NAPEPLDQ6IQ20 393 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 RFX8Q6ZV50 586 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 PARS2Q7L3T8 475 aaKnown RBP8.33□□□□□ -1.08
SNX1-207ENST00000559401 TRIM69Q86WT6 500 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 VSTM4Q8IW00 320 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 UMODL1-AS1Q8N2C9 162 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 ARFGAP1Q8N6T3 406 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 OR8K1Q8NGG5 319 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 CTNNBL1Q8WYA6 563 aaPredicted RBP8.33□□□□□ -1.08
SNX1-207ENST00000559401 ISG20Q96AZ6 181 aaKnown RBP8.33□□□□□ -1.08
SNX1-207ENST00000559401 ARHGEF26Q96DR7 871 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 EXOC2Q96KP1 924 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 CAMK1GQ96NX5 476 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 EIF3CQ99613 913 aaKnown RBP8.33□□□□□ -1.08
SNX1-207ENST00000559401 TRIM5Q9C035 493 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 KLC2Q9H0B6 622 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 NOL6Q9H6R4 1146 aaKnown RBP8.33□□□□□ -1.08
SNX1-207ENST00000559401 EBF2Q9HAK2 575 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 SP110Q9HB58 689 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 CTTNBP2NLQ9P2B4 639 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 UBA2Q9UBT2 640 aaPredicted RBP8.33□□□□□ -1.08
SNX1-207ENST00000559401 IP6K2Q9UHH9 426 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 DMTF1Q9Y222 760 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms