RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 IMP4Q96G21 291 aaKnown RBP11.44□□□□□ -0.58
CLPX-204ENST00000559152 ATXN7L3BQ96GX2 97 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 MRGPRX2Q96LB1 330 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 TTPALQ9BTX7 342 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 FBXO6Q9NRD1 293 aaPredicted RBP11.44□□□□□ -0.58
CLPX-204ENST00000559152 APOBEC2Q9Y235 224 aaKnown RBP11.44□□□□□ -0.58
CLPX-204ENST00000559152 CDY1Q9Y6F8 540 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 MYO18AQ92614 2054 aaKnown RBP11.44□□□□□ -0.58
CLPX-204ENST00000559152 ZNF638Q14966 1978 aaKnown RBP11.44□□□□□ -0.58
CLPX-204ENST00000559152 SLC12A8A0AV02 714 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 RAMP2O60895 175 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 KITP10721 976 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 CRABP2P29373 138 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 KPNA2P52292 529 aaKnown RBP11.44□□□□□ -0.58
CLPX-204ENST00000559152 HK2P52789 917 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 WNT3AP56704 352 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 IL10RBQ08334 325 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 USP10Q14694 798 aaKnown RBP11.44□□□□□ -0.58
CLPX-204ENST00000559152 PSMD5Q16401 504 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.44□□□□□ -0.58
CLPX-204ENST00000559152 TEX26Q8N6G2 289 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 UTP4Q969X6 686 aaKnown RBP11.44□□□□□ -0.58
CLPX-204ENST00000559152 C20orf27Q9GZN8 174 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 NMUR2Q9GZQ4 415 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 MMADHCQ9H3L0 296 aaPredicted RBP11.44□□□□□ -0.58
CLPX-204ENST00000559152 NOL6Q9H6R4 1146 aaKnown RBP11.44□□□□□ -0.58
CLPX-204ENST00000559152 ARL8BQ9NVJ2 186 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 DNAJC28Q9NX36 388 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 SLC39A10Q9ULF5 831 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 DNAJC16Q9Y2G8 782 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 PLXNA3P51805 1871 aa11.44□□□□□ -0.58
CLPX-204ENST00000559152 TRIM13O60858 407 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 KLHL2O95198 593 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 VAPBO95292 243 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 PAPSS2O95340 614 aaPredicted RBP11.43□□□□□ -0.58
CLPX-204ENST00000559152 PEX11BO96011 259 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 LMNAP02545 664 aaKnown RBP11.43□□□□□ -0.58
CLPX-204ENST00000559152 PRKCGP05129 697 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 GALTP07902 379 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 ZDHHC11BP0C7U3 371 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 MAP2K2P36507 400 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 ARCN1P48444 511 aaKnown RBP11.43□□□□□ -0.58
CLPX-204ENST00000559152 TUFMP49411 452 aaKnown RBP11.43□□□□□ -0.58
CLPX-204ENST00000559152 CSRP3P50461 194 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 ASPHQ12797 758 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 GRM3Q14832 879 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 POLD3Q15054 466 aaPredicted RBP11.43□□□□□ -0.58
CLPX-204ENST00000559152 WLSQ5T9L3 541 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 CES4AQ5XG92 561 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 FBXL22Q6P050 247 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 KDELC1Q6UW63 502 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 TFAP2DQ7Z6R9 452 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 ZNF354CQ86Y25 554 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 MIB1Q86YT6 1006 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 LRRC43Q8N309 656 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 PDZD8Q8NEN9 1154 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 OR6Y1Q8NGX8 325 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 MCUR1Q96AQ8 359 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 HMCESQ96FZ2 354 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 RPRD1AQ96P16 312 aaPredicted RBP11.43□□□□□ -0.58
CLPX-204ENST00000559152 TREX1Q9NSU2 369 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 MARCOQ9UEW3 520 aaPredicted RBP11.43□□□□□ -0.58
CLPX-204ENST00000559152 SLC27A5Q9Y2P5 690 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 PCDHB12Q9Y5F1 795 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 CAPN14A8MX76 684 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 FKTNO75072 461 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 SNUPNO95149 360 aaKnown RBP11.43□□□□□ -0.58
CLPX-204ENST00000559152 AHSGP02765 367 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 ALOX15P16050 662 aaPredicted RBP11.43□□□□□ -0.58
CLPX-204ENST00000559152 PBX3P40426 434 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 SERPINH1P50454 418 aaKnown RBP11.43□□□□□ -0.58
CLPX-204ENST00000559152 ITKQ08881 620 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 ITGA9Q13797 1035 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 BTG3Q14201 252 aaPredicted RBP11.43□□□□□ -0.58
CLPX-204ENST00000559152 SMAD1Q15797 465 aaKnown RBP11.43□□□□□ -0.58
CLPX-204ENST00000559152 TSNAXIP1Q2TAA8 658 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 RAP1GAP2Q684P5 730 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 RNF19BQ6ZMZ0 732 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 ALYREFQ86V81 257 aaKnown RBP11.43□□□□□ -0.58
CLPX-204ENST00000559152 TMPRSS6Q8IU80 811 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 LMNTD2Q8IXW0 634 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 CFAP61Q8NHU2 1237 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 OVCA2Q8WZ82 227 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 AZIN2Q96A70 460 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 PABPC5Q96DU9 382 aaKnown RBP11.43□□□□□ -0.58
CLPX-204ENST00000559152 ZNF419Q96HQ0 510 aaPredicted RBP11.43□□□□□ -0.58
CLPX-204ENST00000559152 ZNF778Q96MU6 729 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 TACO1Q9BSH4 297 aaKnown RBP11.43□□□□□ -0.58
CLPX-204ENST00000559152 TTLL2Q9BWV7 592 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 ZNF395Q9H8N7 513 aaPredicted RBP11.43□□□□□ -0.58
CLPX-204ENST00000559152 ATP13A1Q9HD20 1204 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 ACOT9Q9Y305 439 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 NUMBLQ9Y6R0 609 aa11.43□□□□□ -0.58
CLPX-204ENST00000559152 A0A087X1B8 175 aa11.42□□□□□ -0.58
CLPX-204ENST00000559152 SLC38A8A6NNN8 435 aa11.42□□□□□ -0.58
CLPX-204ENST00000559152 TBKBP1A7MCY6 615 aa11.42□□□□□ -0.58
CLPX-204ENST00000559152 GSC2O15499 205 aa11.42□□□□□ -0.58
CLPX-204ENST00000559152 ITM2AO43736 263 aa11.42□□□□□ -0.58
CLPX-204ENST00000559152 TLR5O60602 858 aa11.42□□□□□ -0.58
CLPX-204ENST00000559152 STMN1P16949 149 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms