RNA–Protein interactions for RNA: ENST00000558554.5

IDH3A-207, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2 BASIC

Gene IDH3A, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-207ENST00000558554 KDELR3O43731 214 aa12.8□□□□□ -0.36
IDH3A-207ENST00000558554 PCDH8O95206 1070 aa12.8□□□□□ -0.36
IDH3A-207ENST00000558554 PRNPP04156 253 aa12.8□□□□□ -0.36
IDH3A-207ENST00000558554 CYP1A2P05177 515 aa12.8□□□□□ -0.36
IDH3A-207ENST00000558554 SYPP08247 313 aa12.8□□□□□ -0.36
IDH3A-207ENST00000558554 H2AFZP0C0S5 128 aa12.8□□□□□ -0.36
IDH3A-207ENST00000558554 AMPD1P23109 780 aa12.8□□□□□ -0.36
IDH3A-207ENST00000558554 CLCN6P51797 869 aa12.8□□□□□ -0.36
IDH3A-207ENST00000558554 CARD16Q5EG05 197 aa12.8□□□□□ -0.36
IDH3A-207ENST00000558554 ARHGAP36Q6ZRI8 547 aa12.8□□□□□ -0.36
IDH3A-207ENST00000558554 CYP4V2Q6ZWL3 525 aaPredicted RBP12.8□□□□□ -0.36
IDH3A-207ENST00000558554 H2AFVQ71UI9 128 aa12.8□□□□□ -0.36
IDH3A-207ENST00000558554 RABEPKQ7Z6M1 372 aa12.8□□□□□ -0.36
IDH3A-207ENST00000558554 GAS2L3Q86XJ1 694 aa12.8□□□□□ -0.36
IDH3A-207ENST00000558554 OR2T34Q8NGX1 318 aa12.8□□□□□ -0.36
IDH3A-207ENST00000558554 SLC39A8Q9C0K1 460 aa12.8□□□□□ -0.36
IDH3A-207ENST00000558554 TM9SF3Q9HD45 589 aa12.8□□□□□ -0.36
IDH3A-207ENST00000558554 FZD3Q9NPG1 666 aa12.8□□□□□ -0.36
IDH3A-207ENST00000558554 DLL3Q9NYJ7 618 aa12.8□□□□□ -0.36
IDH3A-207ENST00000558554 CWC15Q9P013 229 aaKnown RBP12.8□□□□□ -0.36
IDH3A-207ENST00000558554 EVLQ9UI08 416 aaPredicted RBP12.8□□□□□ -0.36
IDH3A-207ENST00000558554 PPM1HQ9ULR3 514 aa12.8□□□□□ -0.36
IDH3A-207ENST00000558554 FZD4Q9ULV1 537 aa12.8□□□□□ -0.36
IDH3A-207ENST00000558554 SPEGQ15772 3267 aa12.8□□□□□ -0.36
IDH3A-207ENST00000558554 SPTBN4Q9H254 2564 aa12.79□□□□□ -0.36
IDH3A-207ENST00000558554 ASCC3Q8N3C0 2202 aaKnown RBP12.79□□□□□ -0.36
IDH3A-207ENST00000558554 CDX4O14627 284 aaPredicted RBP12.79□□□□□ -0.36
IDH3A-207ENST00000558554 OPHN1O60890 802 aa12.79□□□□□ -0.36
IDH3A-207ENST00000558554 MAP3K6O95382 1288 aa12.79□□□□□ -0.36
IDH3A-207ENST00000558554 CD160O95971 181 aa12.79□□□□□ -0.36
IDH3A-207ENST00000558554 UGT2B4P06133 528 aa12.79□□□□□ -0.36
IDH3A-207ENST00000558554 IGHV4-34P06331 123 aa12.79□□□□□ -0.36
IDH3A-207ENST00000558554 RARAP10276 462 aa12.79□□□□□ -0.36
IDH3A-207ENST00000558554 PRLRP16471 622 aa12.79□□□□□ -0.36
IDH3A-207ENST00000558554 PAPOLAP51003 745 aaKnown RBP12.79□□□□□ -0.36
IDH3A-207ENST00000558554 ZNF75DP51815 510 aa12.79□□□□□ -0.36
IDH3A-207ENST00000558554 CDH6P55285 790 aa12.79□□□□□ -0.36
IDH3A-207ENST00000558554 MMRN1Q13201 1228 aa12.79□□□□□ -0.36
IDH3A-207ENST00000558554 SEMA3BQ13214 749 aa12.79□□□□□ -0.36
IDH3A-207ENST00000558554 HADHQ16836 314 aaKnown RBP12.79□□□□□ -0.36
IDH3A-207ENST00000558554 AGBL4Q5VU57 503 aa12.79□□□□□ -0.36
IDH3A-207ENST00000558554 PEAR1Q5VY43 1037 aaPredicted RBP12.79□□□□□ -0.36
IDH3A-207ENST00000558554 PSAPL1Q6NUJ1 521 aa12.79□□□□□ -0.36
IDH3A-207ENST00000558554 FBXL19Q6PCT2 694 aa12.79□□□□□ -0.36
IDH3A-207ENST00000558554 SARM1Q6SZW1 724 aa12.79□□□□□ -0.36
IDH3A-207ENST00000558554 TP53INP2Q8IXH6 220 aa12.79□□□□□ -0.36
IDH3A-207ENST00000558554 PCDH20Q8N6Y1 951 aaKnown RBP12.79□□□□□ -0.36
IDH3A-207ENST00000558554 NPWQ8N729 165 aa12.79□□□□□ -0.36
IDH3A-207ENST00000558554 SPC24Q8NBT2 197 aa12.79□□□□□ -0.36
IDH3A-207ENST00000558554 PPP1R16AQ96I34 528 aa12.79□□□□□ -0.36
IDH3A-207ENST00000558554 SERAC1Q96JX3 654 aa12.79□□□□□ -0.36
IDH3A-207ENST00000558554 HEPHQ9BQS7 1158 aa12.79□□□□□ -0.36
IDH3A-207ENST00000558554 CALN1Q9BXU9 219 aa12.79□□□□□ -0.36
IDH3A-207ENST00000558554 IL21RQ9HBE5 538 aa12.79□□□□□ -0.36
IDH3A-207ENST00000558554 UBA2Q9UBT2 640 aaPredicted RBP12.79□□□□□ -0.36
IDH3A-207ENST00000558554 TFR2Q9UP52 801 aa12.79□□□□□ -0.36
IDH3A-207ENST00000558554 CA5BQ9Y2D0 317 aa12.79□□□□□ -0.36
IDH3A-207ENST00000558554 MED19A0JLT2 244 aaPredicted RBP12.78□□□□□ -0.36
IDH3A-207ENST00000558554 ARHGAP42A6NI28 874 aa12.78□□□□□ -0.36
IDH3A-207ENST00000558554 NEMP1O14524 444 aa12.78□□□□□ -0.36
IDH3A-207ENST00000558554 ALOX15BO15296 676 aa12.78□□□□□ -0.36
IDH3A-207ENST00000558554 INSIG1O15503 277 aa12.78□□□□□ -0.36
IDH3A-207ENST00000558554 RNGTTO60942 597 aaKnown RBP12.78□□□□□ -0.36
IDH3A-207ENST00000558554 ZNF821O75541 412 aaPredicted RBP12.78□□□□□ -0.36
IDH3A-207ENST00000558554 PIGNO95427 931 aa12.78□□□□□ -0.36
IDH3A-207ENST00000558554 IGSF6O95976 241 aa12.78□□□□□ -0.36
IDH3A-207ENST00000558554 CD48P09326 243 aa12.78□□□□□ -0.36
IDH3A-207ENST00000558554 HNRNPH3P31942 346 aaKnown RBP12.78□□□□□ -0.36
IDH3A-207ENST00000558554 HOXD12P35452 270 aa12.78□□□□□ -0.36
IDH3A-207ENST00000558554 PCK1P35558 622 aa12.78□□□□□ -0.36
IDH3A-207ENST00000558554 NOVA1P51513 510 aaKnown RBP12.78□□□□□ -0.36
IDH3A-207ENST00000558554 AFF3P51826 1226 aaKnown RBP12.78□□□□□ -0.36
IDH3A-207ENST00000558554 C21orf59P57076 290 aa12.78□□□□□ -0.36
IDH3A-207ENST00000558554 GEMIN4P57678 1058 aaKnown RBP12.78□□□□□ -0.36
IDH3A-207ENST00000558554 SNRPD1P62314 119 aaKnown RBP12.78□□□□□ -0.36
IDH3A-207ENST00000558554 SERINC3Q13530 473 aa12.78□□□□□ -0.36
IDH3A-207ENST00000558554 TEAD4Q15561 434 aa12.78□□□□□ -0.36
IDH3A-207ENST00000558554 PARP15Q460N3 678 aa12.78□□□□□ -0.36
IDH3A-207ENST00000558554 ATP13A4Q4VNC1 1196 aa12.78□□□□□ -0.36
IDH3A-207ENST00000558554 TMCO3Q6UWJ1 677 aa12.78□□□□□ -0.36
IDH3A-207ENST00000558554 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.78□□□□□ -0.36
IDH3A-207ENST00000558554 DEFB124Q8NES8 71 aa12.78□□□□□ -0.36
IDH3A-207ENST00000558554 DNASE2BQ8WZ79 361 aa12.78□□□□□ -0.36
IDH3A-207ENST00000558554 CEP44Q9C0F1 390 aa12.78□□□□□ -0.36
IDH3A-207ENST00000558554 GAREM1Q9H706 876 aa12.78□□□□□ -0.36
IDH3A-207ENST00000558554 EBF2Q9HAK2 575 aa12.78□□□□□ -0.36
IDH3A-207ENST00000558554 CAPN10Q9HC96 672 aa12.78□□□□□ -0.36
IDH3A-207ENST00000558554 ITM2BQ9Y287 266 aa12.78□□□□□ -0.36
IDH3A-207ENST00000558554 HYOU1Q9Y4L1 999 aa12.78□□□□□ -0.36
IDH3A-207ENST00000558554 WASF2Q9Y6W5 498 aa12.78□□□□□ -0.36
IDH3A-207ENST00000558554 SSU72P8A0A1W2PR75 194 aa12.77□□□□□ -0.36
IDH3A-207ENST00000558554 GIPC1O14908 333 aa12.77□□□□□ -0.36
IDH3A-207ENST00000558554 SLC31A1O15431 190 aa12.77□□□□□ -0.36
IDH3A-207ENST00000558554 PLRG1O43660 514 aaKnown RBP12.77□□□□□ -0.36
IDH3A-207ENST00000558554 PALMO75781 387 aa12.77□□□□□ -0.36
IDH3A-207ENST00000558554 CD27P26842 260 aa12.77□□□□□ -0.36
IDH3A-207ENST00000558554 SLC25A11Q02978 314 aaKnown RBP12.77□□□□□ -0.36
IDH3A-207ENST00000558554 SLC20A2Q08357 652 aa12.77□□□□□ -0.36
IDH3A-207ENST00000558554 PRAMEF14Q5SWL7 426 aa12.77□□□□□ -0.36
IDH3A-207ENST00000558554 CFAP58Q5T655 872 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms