RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 ZNF33AQ06730 810 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 SPDYCQ5MJ68 293 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 LYSMD4Q5XG99 296 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 NCBP2-AS2Q69YL0 99 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 ARHGAP36Q6ZRI8 547 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 CYP2U1Q7Z449 544 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 LRRC8AQ8IWT6 810 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 HDDC3Q8N4P3 179 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 AADATQ8N5Z0 425 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 OR2AP1Q8NGE2 309 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 GRIN3AQ8TCU5 1115 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 FAF2Q96CS3 445 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 HSPA12BQ96MM6 686 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 HEPHQ9BQS7 1158 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 NEUROG2Q9H2A3 272 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 ARRDC1-AS1Q9H2J1 176 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 ZDHHC6Q9H6R6 413 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 SGK2Q9HBY8 427 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 HECAQ9UBI9 543 aaPredicted RBP12.57□□□□□ -0.4
SMAD3-205ENST00000558428 TRIM10Q9UDY6 481 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 IPO11Q9UI26 975 aaKnown RBP12.57□□□□□ -0.4
SMAD3-205ENST00000558428 PCDHGA5Q9Y5G8 931 aa12.57□□□□□ -0.4
SMAD3-205ENST00000558428 LAMA1P25391 3075 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 CFAP54Q96N23 3096 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 A0A0U1RQJ8 604 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 MACROD2A1Z1Q3 448 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 MEI4A8MW99 385 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 ZNF487B1APH4 448 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 PLK4O00444 970 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 KPNA3O00505 521 aaPredicted RBP12.56□□□□□ -0.4
SMAD3-205ENST00000558428 NRDCO43847 1150 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 LEFTY1O75610 366 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 PALMO75781 387 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 SEMA4FO95754 770 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 IGSF6O95976 241 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 DRD3P35462 400 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 MPLP40238 635 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 IL10RBQ08334 325 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 SPEM2Q0P670 501 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 PAFAH1B3Q15102 231 aaKnown RBP12.56□□□□□ -0.4
SMAD3-205ENST00000558428 CYTH1Q15438 398 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 CCDC6Q16204 474 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 IFI16Q16666 785 aaKnown RBP12.56□□□□□ -0.4
SMAD3-205ENST00000558428 ARSIQ5FYB1 569 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 ATXN7L2Q5T6C5 722 aaPredicted RBP12.56□□□□□ -0.4
SMAD3-205ENST00000558428 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.56□□□□□ -0.4
SMAD3-205ENST00000558428 VSIG1Q86XK7 387 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 SLC41A1Q8IVJ1 513 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 PLPP6Q8IY26 295 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 ATPAF2Q8N5M1 289 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 PQLC3Q8N755 202 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 TMIEQ8NEW7 156 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 OR6K2Q8NGY2 324 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.56□□□□□ -0.4
SMAD3-205ENST00000558428 PIGKQ92643 395 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 ANP32BQ92688 251 aaKnown RBP12.56□□□□□ -0.4
SMAD3-205ENST00000558428 FOXJ1Q92949 421 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 RNF25Q96BH1 459 aaPredicted RBP12.56□□□□□ -0.4
SMAD3-205ENST00000558428 GDAP1L1Q96MZ0 367 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 RNF157Q96PX1 679 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 MAK16Q9BXY0 300 aaKnown RBP12.56□□□□□ -0.4
SMAD3-205ENST00000558428 DYRK4Q9NR20 520 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 FZD4Q9ULV1 537 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 ADGRG1Q9Y653 693 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 WASF2Q9Y6W5 498 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 ANKRD36A6QL64 1941 aa12.56□□□□□ -0.4
SMAD3-205ENST00000558428 DOCK9Q9BZ29 2069 aa12.55□□□□□ -0.4
SMAD3-205ENST00000558428 BCLAF3A2AJT9 711 aaKnown RBP12.55□□□□□ -0.4
SMAD3-205ENST00000558428 FAM47DPA6NHR8 397 aa12.55□□□□□ -0.4
SMAD3-205ENST00000558428 C3orf70A6NLC5 250 aaPredicted RBP12.55□□□□□ -0.4
SMAD3-205ENST00000558428 RNF103O00237 685 aa12.55□□□□□ -0.4
SMAD3-205ENST00000558428 KRIT1O00522 736 aa12.55□□□□□ -0.4
SMAD3-205ENST00000558428 MAP3K6O95382 1288 aa12.55□□□□□ -0.4
SMAD3-205ENST00000558428 POP4O95707 220 aaKnown RBP12.55□□□□□ -0.4
SMAD3-205ENST00000558428 ITPKAP23677 461 aa12.55□□□□□ -0.4
SMAD3-205ENST00000558428 HOXD11P31277 338 aaPredicted RBP12.55□□□□□ -0.4
SMAD3-205ENST00000558428 GKP32189 559 aa12.55□□□□□ -0.4
SMAD3-205ENST00000558428 RAD51Q06609 339 aa12.55□□□□□ -0.4
SMAD3-205ENST00000558428 CNTN1Q12860 1018 aa12.55□□□□□ -0.4
SMAD3-205ENST00000558428 MYLK3Q32MK0 819 aa12.55□□□□□ -0.4
SMAD3-205ENST00000558428 SYCP2LQ5T4T6 812 aa12.55□□□□□ -0.4
SMAD3-205ENST00000558428 TMCO4Q5TGY1 634 aa12.55□□□□□ -0.4
SMAD3-205ENST00000558428 RFX6Q8HWS3 928 aa12.55□□□□□ -0.4
SMAD3-205ENST00000558428 RGL4Q8IZJ4 473 aa12.55□□□□□ -0.4
SMAD3-205ENST00000558428 CADM4Q8NFZ8 388 aa12.55□□□□□ -0.4
SMAD3-205ENST00000558428 OR14C36Q8NHC7 312 aa12.55□□□□□ -0.4
SMAD3-205ENST00000558428 KIAA1524Q8TCG1 905 aa12.55□□□□□ -0.4
SMAD3-205ENST00000558428 ZNF419Q96HQ0 510 aaPredicted RBP12.55□□□□□ -0.4
SMAD3-205ENST00000558428 PPP1R16AQ96I34 528 aa12.55□□□□□ -0.4
SMAD3-205ENST00000558428 EXOC2Q96KP1 924 aa12.55□□□□□ -0.4
SMAD3-205ENST00000558428 CINPQ9BW66 212 aaPredicted RBP12.55□□□□□ -0.4
SMAD3-205ENST00000558428 C6orf106Q9H6K1 298 aaPredicted RBP12.55□□□□□ -0.4
SMAD3-205ENST00000558428 LHX3Q9UBR4 397 aa12.55□□□□□ -0.4
SMAD3-205ENST00000558428 EVLQ9UI08 416 aaPredicted RBP12.55□□□□□ -0.4
SMAD3-205ENST00000558428 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.55□□□□□ -0.4
SMAD3-205ENST00000558428 ZNF292O60281 2723 aa12.55□□□□□ -0.4
SMAD3-205ENST00000558428 ATXN2Q99700 1313 aaKnown RBP12.55□□□□□ -0.4
SMAD3-205ENST00000558428 GRID2IPA4D2P6 1211 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 LRRC72A6NJI9 287 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 METTL12A8MUP2 240 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms