RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 C19orf57Q0VDD7 668 aa11.48□□□□□ -0.57
RABGGTA-204ENST00000558376 TARDBPQ13148 414 aaKnown RBP eCLIP11.48□□□□□ -0.57
RABGGTA-204ENST00000558376 ZNF211Q13398 564 aaPredicted RBP11.48□□□□□ -0.57
RABGGTA-204ENST00000558376 INAVAQ3KP66 663 aa11.48□□□□□ -0.57
RABGGTA-204ENST00000558376 MPP7Q5T2T1 576 aa11.48□□□□□ -0.57
RABGGTA-204ENST00000558376 C9orf64Q5T6V5 341 aa11.48□□□□□ -0.57
RABGGTA-204ENST00000558376 NADSYN1Q6IA69 706 aa11.48□□□□□ -0.57
RABGGTA-204ENST00000558376 MSANTD2Q6P1R3 559 aa11.48□□□□□ -0.57
RABGGTA-204ENST00000558376 EID2Q8N6I1 236 aa11.48□□□□□ -0.57
RABGGTA-204ENST00000558376 CLEC4CQ8WTT0 213 aa11.48□□□□□ -0.57
RABGGTA-204ENST00000558376 TRIM11Q96F44 468 aa11.48□□□□□ -0.57
RABGGTA-204ENST00000558376 MIS12Q9H081 205 aa11.48□□□□□ -0.57
RABGGTA-204ENST00000558376 HESX1Q9UBX0 185 aa11.48□□□□□ -0.57
RABGGTA-204ENST00000558376 NYNRINQ9P2P1 1898 aaKnown RBP11.48□□□□□ -0.57
RABGGTA-204ENST00000558376 ATXN7O15265 892 aaPredicted RBP11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 ACSL4O60488 711 aa11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 RFPL3O75679 317 aa11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 ITGAVP06756 1048 aa11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 KRT3P12035 628 aa11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 LCP1P13796 627 aa11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 CSKP41240 450 aa11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 ACADVLP49748 655 aa11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 DAOAP59103 153 aa11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 BST2Q10589 180 aaKnown RBP11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 BNIP3Q12983 259 aa11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 CST6Q15828 149 aa11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 WHAMMP3Q1A5X7 153 aa11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 HNRNPA1L2Q32P51 320 aaKnown RBP11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 PPP1R15BQ5SWA1 713 aa11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 OR6B2Q6IFH4 312 aa11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 DNAJC24Q6P3W2 148 aa11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 FBXL19Q6PCT2 694 aa11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 DCUN1D2Q6PH85 259 aa11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 NOA1Q8NC60 698 aaKnown RBP11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 FIBINQ8TAL6 211 aa11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 NXPE2Q96DL1 559 aa11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 PRICKLE1Q96MT3 831 aaPredicted RBP11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 FAM129BQ96TA1 746 aa11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 MRPL47Q9HD33 250 aaKnown RBP11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 AASDHPPTQ9NRN7 309 aa11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 ABCC13Q9NSE7 274 aa11.47□□□□□ -0.57
RABGGTA-204ENST00000558376 TTC34A8MYJ7 566 aa11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 SPOPO43791 374 aa11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 CEP104O60308 925 aa11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 C1SP09871 688 aa11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 TCP1P17987 556 aaKnown RBP11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 SLC8A1P32418 973 aa11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 CTSOP43234 321 aaPredicted RBP11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 SSR1P43307 286 aaKnown RBP11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 GABRB2P47870 512 aa11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 PEX5P50542 639 aa11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 RPS24P62847 133 aaKnown RBP11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 RTP5Q14D33 572 aa11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 ATP13A4Q4VNC1 1196 aa11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 RAB6CQ53S08 254 aa11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 FSCBQ5H9T9 825 aa11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 C6orf118Q5T5N4 469 aa11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 HES3Q5TGS1 186 aa11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 SMYD5Q6GMV2 418 aa11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 C11orf63Q6NUN7 778 aa11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 FAM183BPQ6ZVS7 135 aa11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 MMAAQ8IVH4 418 aaKnown RBP11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 SCML4Q8N228 414 aa11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 OR2T34Q8NGX1 318 aa11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 KCTD13Q8WZ19 329 aa11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 SELENOOQ9BVL4 669 aa11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 SLC4A5Q9BY07 1137 aa11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 RAB6CQ9H0N0 254 aa11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 METTL5Q9NRN9 209 aaKnown RBP11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 SCML1Q9UN30 329 aa11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 AK5Q9Y6K8 562 aa11.46□□□□□ -0.57
RABGGTA-204ENST00000558376 CTAGE15A4D2H0 777 aa11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 SIGLEC16A6NMB1 481 aa11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 TK2O00142 265 aa11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 RNASEH2AO75792 299 aaKnown RBP11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 CTAGE8P0CG41 777 aa11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 PYGMP11217 842 aa11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 CD38P28907 300 aa11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 SLC11A2P49281 568 aa11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 CCR5P51681 352 aa11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 TAS2R40P59535 323 aa11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 ST8SIA6P61647 398 aa11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 C2orf54Q08AI8 447 aa11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 TUBB2AQ13885 445 aa11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 STILQ15468 1287 aa11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 TEX35Q5T0J7 233 aa11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 TRNP1Q6NT89 227 aa11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 KANSL1Q7Z3B3 1105 aa11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 TMEM110Q86TL2 294 aa11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 CTAGE6Q86UF2 777 aa11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 SPATS2Q86XZ4 545 aaKnown RBP11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 MFN1Q8IWA4 741 aa11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 CTAGE4Q8IX94 777 aa11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 SIX6OS1Q8N1H7 587 aa11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 AADATQ8N5Z0 425 aa11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 C3orf20Q8ND61 904 aa11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 COL26A1Q96A83 441 aa11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 TUBB2BQ9BVA1 445 aa11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 CNGB3Q9NQW8 809 aa11.46□□□□□ -0.58
RABGGTA-204ENST00000558376 SLCO3A1Q9UIG8 710 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms