RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 HECAQ9UBI9 543 aaPredicted RBP12.15□□□□□ -0.46
HERC1-202ENST00000558324 FTSJ1Q9UET6 329 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 HPCAL4Q9UM19 191 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 DMTF1Q9Y222 760 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 MSRB2Q9Y3D2 182 aa12.15□□□□□ -0.46
HERC1-202ENST00000558324 CHD8Q9HCK8 2581 aa12.14□□□□□ -0.47
HERC1-202ENST00000558324 PRAMEF26H0Y7S4 382 aa12.14□□□□□ -0.47
HERC1-202ENST00000558324 DFNA5O60443 496 aa12.14□□□□□ -0.47
HERC1-202ENST00000558324 SDC3O75056 442 aa12.14□□□□□ -0.47
HERC1-202ENST00000558324 CD160O95971 181 aa12.14□□□□□ -0.47
HERC1-202ENST00000558324 DESP17661 470 aa12.14□□□□□ -0.47
HERC1-202ENST00000558324 PSMA2P25787 234 aa12.14□□□□□ -0.47
HERC1-202ENST00000558324 L1CAMP32004 1257 aa12.14□□□□□ -0.47
HERC1-202ENST00000558324 ARRB1P49407 418 aaPredicted RBP12.14□□□□□ -0.47
HERC1-202ENST00000558324 NEK3P51956 506 aa12.14□□□□□ -0.47
HERC1-202ENST00000558324 SLC20A2Q08357 652 aa12.14□□□□□ -0.47
HERC1-202ENST00000558324 CCDC15Q0P6D6 951 aa12.14□□□□□ -0.47
HERC1-202ENST00000558324 SCAPQ12770 1279 aa12.14□□□□□ -0.47
HERC1-202ENST00000558324 SFMBT2Q5VUG0 894 aa12.14□□□□□ -0.47
HERC1-202ENST00000558324 FBXL19Q6PCT2 694 aa12.14□□□□□ -0.47
HERC1-202ENST00000558324 PARS2Q7L3T8 475 aaKnown RBP12.14□□□□□ -0.47
HERC1-202ENST00000558324 TMC6Q7Z403 805 aa12.14□□□□□ -0.47
HERC1-202ENST00000558324 HORMAD1Q86X24 394 aa12.14□□□□□ -0.47
HERC1-202ENST00000558324 RTL3Q8N8U3 475 aaKnown RBP12.14□□□□□ -0.47
HERC1-202ENST00000558324 MFSD2AQ8NA29 543 aa12.14□□□□□ -0.47
HERC1-202ENST00000558324 ZCCHC14Q8WYQ9 949 aaKnown RBP12.14□□□□□ -0.47
HERC1-202ENST00000558324 EPAS1Q99814 870 aa12.14□□□□□ -0.47
HERC1-202ENST00000558324 FUCA2Q9BTY2 467 aa12.14□□□□□ -0.47
HERC1-202ENST00000558324 HDAC8Q9BY41 377 aa12.14□□□□□ -0.47
HERC1-202ENST00000558324 MAGEH1Q9H213 219 aa12.14□□□□□ -0.47
HERC1-202ENST00000558324 HAUS4Q9H6D7 363 aa12.14□□□□□ -0.47
HERC1-202ENST00000558324 TOR4AQ9NXH8 423 aa12.14□□□□□ -0.47
HERC1-202ENST00000558324 ZMIZ1Q9ULJ6 1067 aa12.14□□□□□ -0.47
HERC1-202ENST00000558324 FZD10Q9ULW2 581 aa12.14□□□□□ -0.47
HERC1-202ENST00000558324 MYO6Q9UM54 1294 aa12.14□□□□□ -0.47
HERC1-202ENST00000558324 ZFR2Q9UPR6 939 aaKnown RBP12.14□□□□□ -0.47
HERC1-202ENST00000558324 TPRP12270 2363 aaKnown RBP12.14□□□□□ -0.47
HERC1-202ENST00000558324 TP53BP1Q12888 1972 aaPredicted RBP12.14□□□□□ -0.47
HERC1-202ENST00000558324 MAP1BP46821 2468 aaKnown RBP12.13□□□□□ -0.47
HERC1-202ENST00000558324 DOCK4Q8N1I0 1966 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 A0A1B0GTH6 734 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 A0A1W2PQC6 194 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 KRIT1O00522 736 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 TNFSF14O43557 240 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 BUB1O43683 1085 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 SKILP12757 684 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 ADRB3P13945 408 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 ITGB7P26010 798 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 EPHA8P29322 1005 aaPredicted RBP12.13□□□□□ -0.47
HERC1-202ENST00000558324 NUDT1P36639 197 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 GEMIN4P57678 1058 aaKnown RBP12.13□□□□□ -0.47
HERC1-202ENST00000558324 CLDN2P57739 230 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 BNIP3Q12983 259 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 MAPK8IP2Q13387 824 aaPredicted RBP12.13□□□□□ -0.47
HERC1-202ENST00000558324 MAMLD1Q13495 774 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 IQCB1Q15051 598 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 ZNF284Q2VY69 593 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 ATXN7L2Q5T6C5 722 aaPredicted RBP12.13□□□□□ -0.47
HERC1-202ENST00000558324 ZNF571Q7Z3V5 609 aaPredicted RBP12.13□□□□□ -0.47
HERC1-202ENST00000558324 LUZP1Q86V48 1076 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 MARCH9Q86YJ5 346 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 EID2Q8N6I1 236 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 SAP25Q8TEE9 199 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 HMCESQ96FZ2 354 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 TRIM7Q9C029 511 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 KLC2Q9H0B6 622 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 NOL6Q9H6R4 1146 aaKnown RBP12.13□□□□□ -0.47
HERC1-202ENST00000558324 CBX8Q9HC52 389 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 PARVAQ9NVD7 372 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 PCSK1NQ9UHG2 260 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 ITM2BQ9Y287 266 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 SPEGQ15772 3267 aa12.13□□□□□ -0.47
HERC1-202ENST00000558324 FRYQ5TBA9 3013 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 RASA4BC9J798 803 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 NEMP1O14524 444 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 RASA4O43374 803 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 KDELR3O43731 214 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 MAGEC1O60732 1142 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 TMCC1O94876 653 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 FTLP02792 175 aaPredicted RBP12.12□□□□□ -0.47
HERC1-202ENST00000558324 UGT2B4P06133 528 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 THEGLP0DJG4 465 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 HNRNPA2B1P22626 353 aaKnown RBP12.12□□□□□ -0.47
HERC1-202ENST00000558324 AKT2P31751 481 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 TPI1P60174 286 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 SNRPD1P62314 119 aaKnown RBP12.12□□□□□ -0.47
HERC1-202ENST00000558324 KLHL30Q0D2K2 578 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 LRRC73Q5JTD7 316 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 PPP1R2P3Q6NXS1 205 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 NEK5Q6P3R8 708 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 IQCHQ86VS3 1027 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 TMEM145Q8NBT3 493 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 OR2AP1Q8NGE2 309 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 ISG20Q96AZ6 181 aaKnown RBP12.12□□□□□ -0.47
HERC1-202ENST00000558324 ZNF653Q96CK0 615 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 KLHDC7BQ96G42 594 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 EXOC2Q96KP1 924 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 CNDP2Q96KP4 475 aaKnown RBP12.12□□□□□ -0.47
HERC1-202ENST00000558324 CALN1Q9BXU9 219 aa12.12□□□□□ -0.47
HERC1-202ENST00000558324 TTYH3Q9C0H2 523 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms