RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 MTNR1AP48039 350 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 PMS2P54278 862 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 CRYZQ08257 329 aaKnown RBP3.6□□□□□ -1.83
SPG11-206ENST00000558093 DSC1Q08554 894 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 SLC4A8Q2Y0W8 1093 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 CBWD5Q5RIA9 395 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 UBAP2Q5T6F2 1119 aaKnown RBP3.6□□□□□ -1.83
SPG11-206ENST00000558093 ATG9BQ674R7 924 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 NCAPH2Q6IBW4 605 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 DENND1BQ6P3S1 775 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 ZNF367Q7RTV3 350 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 TRIM74Q86UV6 250 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 TRIM73Q86UV7 250 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 FJX1Q86VR8 437 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 SPATA2LQ8IUW3 424 aaPredicted RBP3.6□□□□□ -1.83
SPG11-206ENST00000558093 DNAAF1Q8NEP3 725 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 OR14A16Q8NHC5 309 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 ELP5Q8TE02 316 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 TBC1D20Q96BZ9 403 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 MASTLQ96GX5 879 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 COG8Q96MW5 612 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 PYM1Q9BRP8 204 aaKnown RBP3.6□□□□□ -1.83
SPG11-206ENST00000558093 CXorf56Q9H5V9 222 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 WDR26Q9H7D7 661 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 TTC12Q9H892 705 aaPredicted RBP3.6□□□□□ -1.83
SPG11-206ENST00000558093 ENTPD7Q9NQZ7 604 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 TLR8Q9NR97 1041 aaKnown RBP3.6□□□□□ -1.83
SPG11-206ENST00000558093 RASSF1Q9NS23 344 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 SELENONQ9NZV5 590 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 CNTNAP2Q9UHC6 1331 aa3.6□□□□□ -1.83
SPG11-206ENST00000558093 C17orf100A8MU93 164 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 KDM4EB2RXH2 506 aaPredicted RBP3.59□□□□□ -1.83
SPG11-206ENST00000558093 LDB2O43679 373 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 ITM2AO43736 263 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 PAPSS2O95340 614 aaPredicted RBP3.59□□□□□ -1.83
SPG11-206ENST00000558093 CKMT1AP12532 417 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 CD72P21854 359 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 GPR12P47775 334 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 NUDT6P53370 316 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 ARL4CP56559 192 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 LTBQ06643 244 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 SLC12A1Q13621 1099 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 PKP1Q13835 747 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 ASIC2Q16515 512 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 HLFQ16534 295 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 ME3Q16798 604 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 ZNF284Q2VY69 593 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 KLHL22Q53GT1 634 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 INO80DQ53TQ3 878 aaPredicted RBP3.59□□□□□ -1.83
SPG11-206ENST00000558093 SH2D4BQ5SQS7 431 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 PRAMEF19Q5SWL8 479 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 TBC1D9BQ66K14 1250 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 GJB7Q6PEY0 223 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 CRELD2Q6UXH1 353 aaPredicted RBP3.59□□□□□ -1.83
SPG11-206ENST00000558093 MON1BQ7L1V2 547 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 ANKRD42Q8N9B4 389 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 SETD9Q8NE22 299 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 RASSF8Q8NHQ8 419 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 TMEM18Q96B42 140 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 RNFT2Q96EX2 444 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 MEIS3Q99687 375 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 PPCSQ9HAB8 311 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 ALKBH4Q9NXW9 302 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 IFT80Q9P2H3 777 aaPredicted RBP3.59□□□□□ -1.83
SPG11-206ENST00000558093 IL36RNQ9UBH0 155 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 CNPY2Q9Y2B0 182 aa3.59□□□□□ -1.83
SPG11-206ENST00000558093 GTPBP1O00178 669 aaKnown RBP3.58□□□□□ -1.84
SPG11-206ENST00000558093 SLC25A17O43808 307 aa3.58□□□□□ -1.84
SPG11-206ENST00000558093 SLC28A2O43868 658 aa3.58□□□□□ -1.84
SPG11-206ENST00000558093 PLA2G2AP14555 144 aa3.58□□□□□ -1.84
SPG11-206ENST00000558093 NAGAP17050 411 aa3.58□□□□□ -1.84
SPG11-206ENST00000558093 TNFRSF8P28908 595 aa3.58□□□□□ -1.84
SPG11-206ENST00000558093 HNF1BP35680 557 aa3.58□□□□□ -1.84
SPG11-206ENST00000558093 THPOP40225 353 aa3.58□□□□□ -1.84
SPG11-206ENST00000558093 HALP42357 657 aa3.58□□□□□ -1.84
SPG11-206ENST00000558093 RFX5P48382 616 aaPredicted RBP3.58□□□□□ -1.84
SPG11-206ENST00000558093 ABATP80404 500 aa3.58□□□□□ -1.84
SPG11-206ENST00000558093 TRAF2Q12933 501 aa3.58□□□□□ -1.84
SPG11-206ENST00000558093 HNF4GQ14541 408 aa3.58□□□□□ -1.84
SPG11-206ENST00000558093 PLCB4Q15147 1175 aa3.58□□□□□ -1.84
SPG11-206ENST00000558093 ZNF324BQ6AW86 544 aaPredicted RBP3.58□□□□□ -1.84
SPG11-206ENST00000558093 SUGP1Q8IWZ8 645 aaKnown RBP3.58□□□□□ -1.84
SPG11-206ENST00000558093 NKAPQ8N5F7 415 aaKnown RBP3.58□□□□□ -1.84
SPG11-206ENST00000558093 USP38Q8NB14 1042 aa3.58□□□□□ -1.84
SPG11-206ENST00000558093 NUDCD2Q8WVJ2 157 aa3.58□□□□□ -1.84
SPG11-206ENST00000558093 HSPH1Q92598 858 aa3.58□□□□□ -1.84
SPG11-206ENST00000558093 STAMQ92783 540 aa3.58□□□□□ -1.84
SPG11-206ENST00000558093 SH3KBP1Q96B97 665 aa3.58□□□□□ -1.84
SPG11-206ENST00000558093 PHF21BQ96EK2 531 aa3.58□□□□□ -1.84
SPG11-206ENST00000558093 ZSCAN31Q96LW9 406 aaPredicted RBP3.58□□□□□ -1.84
SPG11-206ENST00000558093 HERPUD2Q9BSE4 406 aa3.58□□□□□ -1.84
SPG11-206ENST00000558093 TM6SF1Q9BZW5 370 aa3.58□□□□□ -1.84
SPG11-206ENST00000558093 MROH8Q9H579 483 aa3.58□□□□□ -1.84
SPG11-206ENST00000558093 STN1Q9H668 368 aaKnown RBP3.58□□□□□ -1.84
SPG11-206ENST00000558093 WDR6Q9NNW5 1121 aaKnown RBP3.58□□□□□ -1.84
SPG11-206ENST00000558093 ITM2CQ9NQX7 267 aa3.58□□□□□ -1.84
SPG11-206ENST00000558093 ATP8A2Q9NTI2 1148 aa3.58□□□□□ -1.84
SPG11-206ENST00000558093 NLKQ9UBE8 527 aa3.58□□□□□ -1.84
SPG11-206ENST00000558093 CD207Q9UJ71 328 aa3.58□□□□□ -1.84
SPG11-206ENST00000558093 PROCRQ9UNN8 238 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms