RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 CEP128Q6ZU80 1094 aa17.14■□□□□ 0.33
SNX1-203ENST00000558040 SUGP1Q8IWZ8 645 aaKnown RBP17.14■□□□□ 0.33
SNX1-203ENST00000558040 SLC44A3Q8N4M1 653 aa17.14■□□□□ 0.33
SNX1-203ENST00000558040 ATP11CQ8NB49 1132 aa17.14■□□□□ 0.33
SNX1-203ENST00000558040 TTC8Q8TAM2 541 aa17.14■□□□□ 0.33
SNX1-203ENST00000558040 DNASE1L2Q92874 299 aa17.14■□□□□ 0.33
SNX1-203ENST00000558040 ZNF419Q96HQ0 510 aaPredicted RBP17.14■□□□□ 0.33
SNX1-203ENST00000558040 FMO2Q99518 471 aa17.14■□□□□ 0.33
SNX1-203ENST00000558040 MGME1Q9BQP7 344 aa17.14■□□□□ 0.33
SNX1-203ENST00000558040 FRMD8Q9BZ67 464 aaPredicted RBP17.14■□□□□ 0.33
SNX1-203ENST00000558040 FOXP3Q9BZS1 431 aa17.14■□□□□ 0.33
SNX1-203ENST00000558040 TSPYL1Q9H0U9 437 aa17.14■□□□□ 0.33
SNX1-203ENST00000558040 ZDHHC18Q9NUE0 388 aa17.14■□□□□ 0.33
SNX1-203ENST00000558040 HS3ST2Q9Y278 367 aa17.14■□□□□ 0.33
SNX1-203ENST00000558040 COL4A3Q01955 1670 aa17.13■□□□□ 0.33
SNX1-203ENST00000558040 CCDC151A5D8V7 595 aa17.13■□□□□ 0.33
SNX1-203ENST00000558040 NNMTP40261 264 aa17.13■□□□□ 0.33
SNX1-203ENST00000558040 OPRD1P41143 372 aa17.13■□□□□ 0.33
SNX1-203ENST00000558040 SLC6A11P48066 632 aa17.13■□□□□ 0.33
SNX1-203ENST00000558040 RHOAP61586 193 aa17.13■□□□□ 0.33
SNX1-203ENST00000558040 KDSRQ06136 332 aa17.13■□□□□ 0.33
SNX1-203ENST00000558040 CYTH1Q15438 398 aa17.13■□□□□ 0.33
SNX1-203ENST00000558040 ALG1LQ6GMV1 187 aa17.13■□□□□ 0.33
SNX1-203ENST00000558040 ZDHHC24Q6UX98 284 aa17.13■□□□□ 0.33
SNX1-203ENST00000558040 NAT8LQ8N9F0 302 aa17.13■□□□□ 0.33
SNX1-203ENST00000558040 TERB1Q8NA31 727 aa17.13■□□□□ 0.33
SNX1-203ENST00000558040 FBXO25Q8TCJ0 367 aa17.13■□□□□ 0.33
SNX1-203ENST00000558040 PRCCQ92733 491 aaPredicted RBP17.13■□□□□ 0.33
SNX1-203ENST00000558040 CIPCQ9C0C6 399 aa17.13■□□□□ 0.33
SNX1-203ENST00000558040 CEP44Q9C0F1 390 aa17.13■□□□□ 0.33
SNX1-203ENST00000558040 VPS45Q9NRW7 570 aa17.13■□□□□ 0.33
SNX1-203ENST00000558040 SLC8A2Q9UPR5 921 aa17.13■□□□□ 0.33
SNX1-203ENST00000558040 ACTL7AQ9Y615 435 aa17.13■□□□□ 0.33
SNX1-203ENST00000558040 F5H423 210 aaPredicted RBP17.12■□□□□ 0.33
SNX1-203ENST00000558040 TRIM24O15164 1050 aa17.12■□□□□ 0.33
SNX1-203ENST00000558040 CD160O95971 181 aa17.12■□□□□ 0.33
SNX1-203ENST00000558040 APODP05090 189 aa17.12■□□□□ 0.33
SNX1-203ENST00000558040 SRPRAP08240 638 aaKnown RBP17.12■□□□□ 0.33
SNX1-203ENST00000558040 DLDP09622 509 aaKnown RBP17.12■□□□□ 0.33
SNX1-203ENST00000558040 IL9P15248 144 aa17.12■□□□□ 0.33
SNX1-203ENST00000558040 ECHS1P30084 290 aa17.12■□□□□ 0.33
SNX1-203ENST00000558040 GRIA2P42262 883 aa17.12■□□□□ 0.33
SNX1-203ENST00000558040 CTSOP43234 321 aaPredicted RBP17.12■□□□□ 0.33
SNX1-203ENST00000558040 VASPP50552 380 aaPredicted RBP17.12■□□□□ 0.33
SNX1-203ENST00000558040 MAXP61244 160 aa17.12■□□□□ 0.33
SNX1-203ENST00000558040 PFKPQ01813 784 aa17.12■□□□□ 0.33
SNX1-203ENST00000558040 TFF2Q03403 129 aa17.12■□□□□ 0.33
SNX1-203ENST00000558040 NSUN2Q08J23 767 aaKnown RBP eCLIP17.12■□□□□ 0.33
SNX1-203ENST00000558040 MPP3Q13368 585 aa17.12■□□□□ 0.33
SNX1-203ENST00000558040 E2F5Q15329 346 aa17.12■□□□□ 0.33
SNX1-203ENST00000558040 SLC14A2Q15849 920 aa17.12■□□□□ 0.33
SNX1-203ENST00000558040 RALGPS1Q5JS13 557 aa17.12■□□□□ 0.33
SNX1-203ENST00000558040 FAM182AQ5T1J6 154 aa17.12■□□□□ 0.33
SNX1-203ENST00000558040 PGBD5Q8N414 524 aa17.12■□□□□ 0.33
SNX1-203ENST00000558040 ZCCHC9Q8N567 271 aaKnown RBP17.12■□□□□ 0.33
SNX1-203ENST00000558040 TSEN2Q8NCE0 465 aaKnown RBP17.12■□□□□ 0.33
SNX1-203ENST00000558040 MCUQ8NE86 351 aa17.12■□□□□ 0.33
SNX1-203ENST00000558040 UCMAQ8WVF2 138 aa17.12■□□□□ 0.33
SNX1-203ENST00000558040 ISG20Q96AZ6 181 aaKnown RBP17.12■□□□□ 0.33
SNX1-203ENST00000558040 IMP4Q96G21 291 aaKnown RBP17.12■□□□□ 0.33
SNX1-203ENST00000558040 SEMA3CQ99985 751 aa17.12■□□□□ 0.33
SNX1-203ENST00000558040 C8orf33Q9H7E9 229 aaPredicted RBP17.12■□□□□ 0.33
SNX1-203ENST00000558040 LRRC40Q9H9A6 602 aa17.12■□□□□ 0.33
SNX1-203ENST00000558040 PRKAG3Q9UGI9 489 aa17.12■□□□□ 0.33
SNX1-203ENST00000558040 ERVW-1Q9UQF0 538 aa17.12■□□□□ 0.33
SNX1-203ENST00000558040 FCF1Q9Y324 198 aaKnown RBP17.12■□□□□ 0.33
SNX1-203ENST00000558040 KIAA1549LQ6ZVL6 1849 aa17.12■□□□□ 0.33
SNX1-203ENST00000558040 TBC1D3BA6NDS4 549 aa17.11■□□□□ 0.33
SNX1-203ENST00000558040 LOC730098B7Z3J9 87 aa17.11■□□□□ 0.33
SNX1-203ENST00000558040 DYNC1I1O14576 645 aa17.11■□□□□ 0.33
SNX1-203ENST00000558040 AP2A1O95782 977 aa17.11■□□□□ 0.33
SNX1-203ENST00000558040 MT-CO1P00395 513 aa17.11■□□□□ 0.33
SNX1-203ENST00000558040 MYBL2P10244 700 aa17.11■□□□□ 0.33
SNX1-203ENST00000558040 SRCP12931 536 aa17.11■□□□□ 0.33
SNX1-203ENST00000558040 TNNT3P45378 269 aaPredicted RBP17.11■□□□□ 0.33
SNX1-203ENST00000558040 MAPK8P45983 427 aa17.11■□□□□ 0.33
SNX1-203ENST00000558040 ST8SIA6P61647 398 aa17.11■□□□□ 0.33
SNX1-203ENST00000558040 DSC2Q02487 901 aa17.11■□□□□ 0.33
SNX1-203ENST00000558040 ANKRD22Q5VYY1 191 aa17.11■□□□□ 0.33
SNX1-203ENST00000558040 TMEM215Q68D42 235 aa17.11■□□□□ 0.33
SNX1-203ENST00000558040 EMBQ6PCB8 327 aa17.11■□□□□ 0.33
SNX1-203ENST00000558040 LINC00523Q86TU6 105 aa17.11■□□□□ 0.33
SNX1-203ENST00000558040 RALGPS2Q86X27 583 aaPredicted RBP17.11■□□□□ 0.33
SNX1-203ENST00000558040 KLHDC8BQ8IXV7 354 aa17.11■□□□□ 0.33
SNX1-203ENST00000558040 GSPT2Q8IYD1 628 aaKnown RBP17.11■□□□□ 0.33
SNX1-203ENST00000558040 PHTF2Q8N3S3 785 aa17.11■□□□□ 0.33
SNX1-203ENST00000558040 SH2D3CQ8N5H7 860 aa17.11■□□□□ 0.33
SNX1-203ENST00000558040 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.11■□□□□ 0.33
SNX1-203ENST00000558040 PDCD7Q8N8D1 485 aaKnown RBP17.11■□□□□ 0.33
SNX1-203ENST00000558040 MSANTD3Q96H12 275 aa17.11■□□□□ 0.33
SNX1-203ENST00000558040 RPL10LQ96L21 214 aaKnown RBP17.11■□□□□ 0.33
SNX1-203ENST00000558040 NUDCD1Q96RS6 583 aa17.11■□□□□ 0.33
SNX1-203ENST00000558040 NEUROG2Q9H2A3 272 aa17.11■□□□□ 0.33
SNX1-203ENST00000558040 SCUBE2Q9NQ36 999 aa17.11■□□□□ 0.33
SNX1-203ENST00000558040 ELOVL2Q9NXB9 296 aa17.11■□□□□ 0.33
SNX1-203ENST00000558040 THEGQ9P2T0 379 aa17.11■□□□□ 0.33
SNX1-203ENST00000558040 LHX3Q9UBR4 397 aa17.11■□□□□ 0.33
SNX1-203ENST00000558040 FAM153AQ9UHL3 310 aa17.11■□□□□ 0.33
SNX1-203ENST00000558040 PLA2G4CQ9UP65 541 aa17.11■□□□□ 0.33
SNX1-203ENST00000558040 K7ERQ8 282 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms