RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 XRCC4Q13426 336 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 ELF2Q15723 593 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 CST6Q15828 149 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 MARC1Q5VT66 337 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 TSSK4Q6SA08 328 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 LINGO4Q6UY18 593 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 Q6ZVU0 165 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 CPNE8Q86YQ8 564 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 CCDC50Q8IVM0 306 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 TTC13Q8NBP0 860 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 CADM4Q8NFZ8 388 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 P3H4Q92791 437 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 FOXJ1Q92949 421 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 FAM131CQ96AQ9 280 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 TUBGCP5Q96RT8 1024 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 CARD9Q9H257 536 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 DTLQ9NZJ0 730 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 IL36AQ9UHA7 158 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 RAB23Q9ULC3 237 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 JRKLQ9Y4A0 524 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 HYOU1Q9Y4L1 999 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 CAPN6Q9Y6Q1 641 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 RIF1Q5UIP0 2472 aaKnown RBP13.92□□□□□ -0.18
SHMT2-234ENST00000557703 HACD1B0YJ81 288 aa13.91□□□□□ -0.18
SHMT2-234ENST00000557703 SMAD6O43541 496 aaKnown RBP13.91□□□□□ -0.18
SHMT2-234ENST00000557703 CST8O60676 142 aa13.91□□□□□ -0.18
SHMT2-234ENST00000557703 TNNT1P13805 278 aa13.91□□□□□ -0.18
SHMT2-234ENST00000557703 CD6P30203 668 aa13.91□□□□□ -0.18
SHMT2-234ENST00000557703 SLC8A1P32418 973 aa13.91□□□□□ -0.18
SHMT2-234ENST00000557703 TPMTP51580 245 aa13.91□□□□□ -0.18
SHMT2-234ENST00000557703 RHOAP61586 193 aa13.91□□□□□ -0.18
SHMT2-234ENST00000557703 PPIDQ08752 370 aaKnown RBP13.91□□□□□ -0.18
SHMT2-234ENST00000557703 LBRQ14739 615 aaKnown RBP13.91□□□□□ -0.18
SHMT2-234ENST00000557703 MYLK3Q32MK0 819 aa13.91□□□□□ -0.18
SHMT2-234ENST00000557703 MAP7D1Q3KQU3 841 aa13.91□□□□□ -0.18
SHMT2-234ENST00000557703 MEI1Q5TIA1 1274 aa13.91□□□□□ -0.18
SHMT2-234ENST00000557703 RFX6Q8HWS3 928 aa13.91□□□□□ -0.18
SHMT2-234ENST00000557703 STK40Q8N2I9 435 aa13.91□□□□□ -0.18
SHMT2-234ENST00000557703 TEX26Q8N6G2 289 aa13.91□□□□□ -0.18
SHMT2-234ENST00000557703 SPOCK2Q92563 424 aa13.91□□□□□ -0.18
SHMT2-234ENST00000557703 KRT35Q92764 455 aa13.91□□□□□ -0.18
SHMT2-234ENST00000557703 HAUS1Q96CS2 278 aa13.91□□□□□ -0.18
SHMT2-234ENST00000557703 ZNF641Q96N77 438 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-234ENST00000557703 VAT1Q99536 393 aa13.91□□□□□ -0.18
SHMT2-234ENST00000557703 CINPQ9BW66 212 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-234ENST00000557703 HDAC8Q9BY41 377 aa13.91□□□□□ -0.18
SHMT2-234ENST00000557703 FRMD8P1Q9BZ68 369 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-234ENST00000557703 OSBPL8Q9BZF1 889 aa13.91□□□□□ -0.18
SHMT2-234ENST00000557703 DUSP15Q9H1R2 295 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-234ENST00000557703 PABPC3Q9H361 631 aaKnown RBP13.91□□□□□ -0.18
SHMT2-234ENST00000557703 GOLPH3Q9H4A6 298 aa13.91□□□□□ -0.18
SHMT2-234ENST00000557703 DYRK4Q9NR20 520 aa13.91□□□□□ -0.18
SHMT2-234ENST00000557703 KCND1Q9NSA2 647 aa13.91□□□□□ -0.18
SHMT2-234ENST00000557703 KLHL11Q9NVR0 708 aa13.91□□□□□ -0.18
SHMT2-234ENST00000557703 HECAQ9UBI9 543 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-234ENST00000557703 TRIM10Q9UDY6 481 aa13.91□□□□□ -0.18
SHMT2-234ENST00000557703 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-234ENST00000557703 J3KR12 359 aa13.9□□□□□ -0.18
SHMT2-234ENST00000557703 K7ERQ8 282 aa13.9□□□□□ -0.18
SHMT2-234ENST00000557703 MFSD11O43934 449 aa13.9□□□□□ -0.18
SHMT2-234ENST00000557703 FOXD2O60548 495 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-234ENST00000557703 IL1BP01584 269 aa13.9□□□□□ -0.18
SHMT2-234ENST00000557703 NFKBIAP25963 317 aa13.9□□□□□ -0.18
SHMT2-234ENST00000557703 HOXD12P35452 270 aa13.9□□□□□ -0.18
SHMT2-234ENST00000557703 NUDT1P36639 197 aa13.9□□□□□ -0.18
SHMT2-234ENST00000557703 AP1S1P61966 158 aa13.9□□□□□ -0.18
SHMT2-234ENST00000557703 SIM2Q14190 667 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-234ENST00000557703 ZNF235Q14590 738 aa13.9□□□□□ -0.18
SHMT2-234ENST00000557703 RPS6KA1Q15418 735 aa13.9□□□□□ -0.18
SHMT2-234ENST00000557703 CYTH1Q15438 398 aa13.9□□□□□ -0.18
SHMT2-234ENST00000557703 HEATR6Q6AI08 1181 aaKnown RBP13.9□□□□□ -0.18
SHMT2-234ENST00000557703 NEK5Q6P3R8 708 aa13.9□□□□□ -0.18
SHMT2-234ENST00000557703 KIAA1324Q6UXG2 1013 aaKnown RBP13.9□□□□□ -0.18
SHMT2-234ENST00000557703 DPY19L3Q6ZPD9 716 aa13.9□□□□□ -0.18
SHMT2-234ENST00000557703 CEP68Q76N32 757 aa13.9□□□□□ -0.18
SHMT2-234ENST00000557703 LPCAT2Q7L5N7 544 aa13.9□□□□□ -0.18
SHMT2-234ENST00000557703 MMAAQ8IVH4 418 aaKnown RBP13.9□□□□□ -0.18
SHMT2-234ENST00000557703 ZNF366Q8N895 744 aa13.9□□□□□ -0.18
SHMT2-234ENST00000557703 PIP4K2CQ8TBX8 421 aa13.9□□□□□ -0.18
SHMT2-234ENST00000557703 MAIP1Q8WWC4 291 aa13.9□□□□□ -0.18
SHMT2-234ENST00000557703 MAML1Q92585 1016 aa13.9□□□□□ -0.18
SHMT2-234ENST00000557703 RAB7BQ96AH8 199 aa13.9□□□□□ -0.18
SHMT2-234ENST00000557703 OLFM3Q96PB7 478 aa13.9□□□□□ -0.18
SHMT2-234ENST00000557703 OMDQ99983 421 aa13.9□□□□□ -0.18
SHMT2-234ENST00000557703 BTBD1Q9H0C5 482 aa13.9□□□□□ -0.18
SHMT2-234ENST00000557703 KCNF1Q9H3M0 494 aa13.9□□□□□ -0.18
SHMT2-234ENST00000557703 WSB2Q9NYS7 404 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-234ENST00000557703 DKK3Q9UBP4 350 aa13.9□□□□□ -0.18
SHMT2-234ENST00000557703 FCF1Q9Y324 198 aaKnown RBP13.9□□□□□ -0.18
SHMT2-234ENST00000557703 PCDHGA5Q9Y5G8 931 aa13.9□□□□□ -0.18
SHMT2-234ENST00000557703 GON4LQ3T8J9 2241 aa13.89□□□□□ -0.19
SHMT2-234ENST00000557703 IGHV1OR15-9A0A0B4J2B8 117 aa13.89□□□□□ -0.19
SHMT2-234ENST00000557703 DDX3YO15523 660 aaKnown RBP13.89□□□□□ -0.19
SHMT2-234ENST00000557703 MAP3K13O43283 966 aa13.89□□□□□ -0.19
SHMT2-234ENST00000557703 HRO43593 1189 aa13.89□□□□□ -0.19
SHMT2-234ENST00000557703 KIF5CO60282 957 aa13.89□□□□□ -0.19
SHMT2-234ENST00000557703 LRP3O75074 770 aa13.89□□□□□ -0.19
SHMT2-234ENST00000557703 NDUFS2O75306 463 aa13.89□□□□□ -0.19
SHMT2-234ENST00000557703 FTCDO95954 541 aa13.89□□□□□ -0.19
SHMT2-234ENST00000557703 PEX11BO96011 259 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms