RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 NBPF5PQ86XG9 351 aaPredicted RBP1.84□□□□□ -2.12
HIF1A-212ENST00000557538 DDIASQ8IXT1 998 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 HS6ST2Q96MM7 605 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 SLITRK1Q96PX8 696 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 SEZ6LQ9BYH1 1024 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 SH3BP4Q9P0V3 963 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 SARDHQ9UL12 918 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 PNMA2Q9UL42 364 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 ST3GAL5Q9UNP4 418 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 SMC3Q9UQE7 1217 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 ADGRF5Q8IZF2 1346 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 ZNF541Q9H0D2 1346 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 EIF4G1Q04637 1599 aaKnown RBP1.84□□□□□ -2.12
HIF1A-212ENST00000557538 ANKRD18BA2A2Z9 1011 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 EXOC3O60645 756 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 RNF8O76064 485 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 MLYCDO95822 493 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 LYL1P12980 280 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 ENO3P13929 434 aaPredicted RBP1.83□□□□□ -2.12
HIF1A-212ENST00000557538 ITGAXP20702 1163 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 MYF6P23409 242 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 CALRP27797 417 aaKnown RBP1.83□□□□□ -2.12
HIF1A-212ENST00000557538 CHRNA5P30532 468 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 COPB2P35606 906 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 PGM1P36871 562 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 PSMB10P40306 273 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 FASLGP48023 281 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 EIF4A2Q14240 407 aaKnown RBP1.83□□□□□ -2.12
HIF1A-212ENST00000557538 GPR68Q15743 365 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 SLC9C1Q4G0N8 1177 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 MORN5Q5VZ52 161 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 TMEM81Q6P7N7 255 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 SERPINA13PQ6UXR4 307 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 KRT77Q7Z794 578 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 PAF1Q8N7H5 531 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 FAM149B1Q96BN6 582 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 AGAP3Q96P47 875 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 SERINC2Q96SA4 455 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 SEPT5Q99719 369 aaPredicted RBP1.83□□□□□ -2.12
HIF1A-212ENST00000557538 SCAND2PQ9GZW5 306 aaPredicted RBP1.83□□□□□ -2.12
HIF1A-212ENST00000557538 KLHL31Q9H511 634 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 ASAH2Q9NR71 780 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 ASB6Q9NWX5 421 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 ANKRD10Q9NXR5 420 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 IL36RNQ9UBH0 155 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 UBA2Q9UBT2 640 aaPredicted RBP1.83□□□□□ -2.12
HIF1A-212ENST00000557538 ING1Q9UK53 422 aaPredicted RBP1.83□□□□□ -2.12
HIF1A-212ENST00000557538 NAALADL1Q9UQQ1 740 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 HEMK1Q9Y5R4 338 aaPredicted RBP1.83□□□□□ -2.12
HIF1A-212ENST00000557538 TMEM94Q12767 1356 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 A0A1W2PQF6 199 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 ARHGAP10A1A4S6 786 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 PI4KAP2A4QPH2 592 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 A8MZ25 164 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 LDLRAD4O15165 306 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 HBP1O60381 514 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 KRT38O76015 456 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 RTN3O95197 1032 aaPredicted RBP1.83□□□□□ -2.12
HIF1A-212ENST00000557538 TBX18O95935 607 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 WEE2P0C1S8 567 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 SKILP12757 684 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 CD72P21854 359 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 CNTFP26441 200 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 GSTM2P28161 218 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 TYK2P29597 1187 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 YWHAZP63104 245 aaKnown RBP1.83□□□□□ -2.12
HIF1A-212ENST00000557538 DUSP6Q16828 381 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 PLEKHO1Q53GL0 409 aaPredicted RBP1.83□□□□□ -2.12
HIF1A-212ENST00000557538 FAM83HQ6ZRV2 1179 aaPredicted RBP1.83□□□□□ -2.12
HIF1A-212ENST00000557538 RD3Q7Z3Z2 195 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 TSPAN33Q86UF1 283 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 RRP36Q96EU6 259 aaKnown RBP1.83□□□□□ -2.12
HIF1A-212ENST00000557538 CTDSP1Q9GZU7 261 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 MAGIXQ9H6Y5 334 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 BLOC1S4Q9NUP1 217 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 SPATS2LQ9NUQ6 558 aaKnown RBP1.83□□□□□ -2.12
HIF1A-212ENST00000557538 TTLL3Q9Y4R7 772 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 RAD54L2Q9Y4B4 1467 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 ZNF804BA4D1E1 1349 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 RAD50Q92878 1312 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 SMIM35A0A1B0GVV1 85 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 SLC22A23A1A5C7 686 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 PGPEP1LA6NFU8 196 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 PER2O15055 1255 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 BCAT2O15382 392 aaPredicted RBP1.83□□□□□ -2.12
HIF1A-212ENST00000557538 HCRTR2O43614 444 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 PAGE4O60829 102 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 SOX30O94993 753 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 VDRP11473 427 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 UNGP13051 313 aaPredicted RBP1.83□□□□□ -2.12
HIF1A-212ENST00000557538 DDX5P17844 614 aaKnown RBP1.83□□□□□ -2.12
HIF1A-212ENST00000557538 CDAP32320 146 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 EFNB1P98172 346 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 GHRHRQ02643 423 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 SLC18A2Q05940 514 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 NEXNQ0ZGT2 675 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 ACVR2BQ13705 512 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 ERV3-1Q14264 604 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 GSTA3Q16772 222 aa1.83□□□□□ -2.12
HIF1A-212ENST00000557538 HIST2H2ACQ16777 129 aaPredicted RBP1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms