RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 SP110Q9HB58 689 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 SEMA4GQ9NTN9 838 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 HAUS2Q9NVX0 235 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 USP36Q9P275 1121 aaKnown RBP8.5□□□□□ -1.05
PSEN1-223ENST00000557511 TPX2Q9ULW0 747 aaKnown RBP8.5□□□□□ -1.05
PSEN1-223ENST00000557511 OR51B4Q9Y5P0 310 aa8.5□□□□□ -1.05
PSEN1-223ENST00000557511 CACNA1HO95180 2353 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 A0A1W2PP55 124 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 BCLAF3A2AJT9 711 aaKnown RBP8.49□□□□□ -1.05
PSEN1-223ENST00000557511 FAM47DPA6NHR8 397 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 RASA4BC9J798 803 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 DFFAO00273 331 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 KPNA3O00505 521 aaPredicted RBP8.49□□□□□ -1.05
PSEN1-223ENST00000557511 MCF2LO15068 1137 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 MID1O15344 667 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 RASA4O43374 803 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 KDELR3O43731 214 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 SPOPO43791 374 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 NEBLO76041 1014 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 SEMA4FO95754 770 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 IGSF6O95976 241 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 ZNF806P0C7X5 589 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 RARAP10276 462 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 GOT1P17174 413 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 ERCC2P18074 760 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 CDC25BP30305 580 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 CHRNA3P32297 505 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 MAN1A1P33908 653 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 HOXD12P35452 270 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 ACVRL1P37023 503 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 SLC1A1P43005 524 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 GSDMDP57764 484 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 RHOAP61586 193 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 ZNF252P-AS1Q0IIN9 211 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 PDK2Q15119 407 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 IFI16Q16666 785 aaKnown RBP8.49□□□□□ -1.05
PSEN1-223ENST00000557511 ASTE1Q2TB18 679 aaPredicted RBP8.49□□□□□ -1.05
PSEN1-223ENST00000557511 CARD16Q5EG05 197 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 CFAP58Q5T655 872 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 SYT12Q8IV01 421 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 UMODL1-AS1Q8N2C9 162 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 HDDC3Q8N4P3 179 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 DEFB119Q8N690 84 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 SPC24Q8NBT2 197 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 OR52K2Q8NGK3 314 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 SLC35G2Q8TBE7 412 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.49□□□□□ -1.05
PSEN1-223ENST00000557511 PTPRN2Q92932 1015 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 SKA1Q96BD8 255 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 MYO19Q96H55 970 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 BTBD6Q96KE9 485 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 HSPA12BQ96MM6 686 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 ZNF830Q96NB3 372 aaPredicted RBP8.49□□□□□ -1.05
PSEN1-223ENST00000557511 KCTD15Q96SI1 283 aaPredicted RBP8.49□□□□□ -1.05
PSEN1-223ENST00000557511 PSMB7Q99436 277 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 BAG1Q99933 345 aaPredicted RBP8.49□□□□□ -1.05
PSEN1-223ENST00000557511 HEPHQ9BQS7 1158 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 CALN1Q9BXU9 219 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 MAK16Q9BXY0 300 aaKnown RBP8.49□□□□□ -1.05
PSEN1-223ENST00000557511 PACSIN1Q9BY11 444 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 ACE2Q9BYF1 805 aaPredicted RBP8.49□□□□□ -1.05
PSEN1-223ENST00000557511 MIR1-1HGQ9H1L0 117 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 MTG2Q9H4K7 406 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 CD248Q9HCU0 757 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 WSB2Q9NYS7 404 aaPredicted RBP8.49□□□□□ -1.05
PSEN1-223ENST00000557511 RCOR3Q9P2K3 495 aaPredicted RBP8.49□□□□□ -1.05
PSEN1-223ENST00000557511 UBA2Q9UBT2 640 aaPredicted RBP8.49□□□□□ -1.05
PSEN1-223ENST00000557511 IL36AQ9UHA7 158 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 CDV3Q9UKY7 258 aaKnown RBP8.49□□□□□ -1.05
PSEN1-223ENST00000557511 FZD4Q9ULV1 537 aa8.49□□□□□ -1.05
PSEN1-223ENST00000557511 SLC7A4O43246 635 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 FSBPO95073 299 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 MT-CO1P00395 513 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 IGLV3-19P01714 112 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 CFIP05156 583 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 SYPP08247 313 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 XPAP23025 273 aaPredicted RBP8.48□□□□□ -1.05
PSEN1-223ENST00000557511 WDR4P57081 412 aaKnown RBP8.48□□□□□ -1.05
PSEN1-223ENST00000557511 SEMA3BQ13214 749 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 SERINC3Q13530 473 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 TEAD4Q15561 434 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 DPYSL2Q16555 572 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 CA9Q16790 459 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 DUOXA1Q1HG43 343 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 INO80DQ53TQ3 878 aaPredicted RBP8.48□□□□□ -1.05
PSEN1-223ENST00000557511 SLC45A4Q5BKX6 768 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 TMCO4Q5TGY1 634 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.48□□□□□ -1.05
PSEN1-223ENST00000557511 PRR23CQ6ZRP0 262 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 ADAT2Q7Z6V5 191 aaKnown RBP8.48□□□□□ -1.05
PSEN1-223ENST00000557511 KIAA1328Q86T90 577 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 FRMD1Q8N878 549 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 TMIEQ8NEW7 156 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 OR2T34Q8NGX1 318 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 OR14C36Q8NHC7 312 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 PIP4K2CQ8TBX8 421 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 FRS2Q8WU20 508 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 ISG20Q96AZ6 181 aaKnown RBP8.48□□□□□ -1.05
PSEN1-223ENST00000557511 HMCESQ96FZ2 354 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 ZNF419Q96HQ0 510 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms