RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 MTG2Q9H4K7 406 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 THAP9Q9H5L6 903 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 PRORYQ9H606 182 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 POPDC2Q9HBU9 364 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 TMEM51Q9NW97 253 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 ZFATQ9P243 1243 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 ARHGAP20Q9P2F6 1191 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 NAALADL1Q9UQQ1 740 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 CEP83Q9Y592 693 aa8.92□□□□□ -0.98
VRK1-206ENST00000557222 TBC1D3DA0A087WVF3 549 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 TBC1D3IA0A087WXS9 549 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 TBC1D3EA0A087X179 549 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 TBC1D3KA0A087X1G2 549 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 A0A1B0GVM2 712 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 TBC1D3FA6NER0 549 aaPredicted RBP8.91□□□□□ -0.98
VRK1-206ENST00000557222 TCAF2A6NFQ2 919 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 CAPN8A6NHC0 703 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 TBC1D3LB9A6J9 549 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 F5H5T6 163 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 PRAMEF26H0Y7S4 382 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 PLRG1O43660 514 aaKnown RBP8.91□□□□□ -0.98
VRK1-206ENST00000557222 MAP3K6O95382 1288 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 TRUB2O95900 331 aaKnown RBP8.91□□□□□ -0.98
VRK1-206ENST00000557222 IL1BP01584 269 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 TBC1D3HP0C7X1 549 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 TACR2P21452 398 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 ACP1P24666 158 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 DRD3P35462 400 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 PSMD8P48556 350 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 C19orf57Q0VDD7 668 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 TARDBPQ13148 414 aaKnown RBP eCLIP8.91□□□□□ -0.984e-8■■■□□ 15.1
VRK1-206ENST00000557222 ZNF211Q13398 564 aaPredicted RBP8.91□□□□□ -0.98
VRK1-206ENST00000557222 STAT4Q14765 748 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 CCDC157Q569K6 752 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 PRRT3Q5FWE3 981 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 HES3Q5TGS1 186 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 SYPL2Q5VXT5 272 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 TBC1D3GQ6DHY5 549 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 TBC1D3CQ6IPX1 549 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.91□□□□□ -0.98
VRK1-206ENST00000557222 ENOSF1Q7L5Y1 443 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 TAC4Q86UU9 113 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 CHSY1Q86X52 802 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 MARCH9Q86YJ5 346 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 TREML1Q86YW5 311 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 TBC1D3Q8IZP1 549 aaPredicted RBP8.91□□□□□ -0.98
VRK1-206ENST00000557222 APCDD1Q8J025 514 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 LGI2Q8N0V4 545 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 CFAP52Q8N1V2 620 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 DCBLD1Q8N8Z6 715 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 FRS2Q8WU20 508 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 OR8D1Q8WZ84 308 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 FGF11Q92914 225 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 MYEOVQ96EZ4 313 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 PRMT1Q99873 361 aaKnown RBP8.91□□□□□ -0.98
VRK1-206ENST00000557222 SAP130Q9H0E3 1048 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 PREBQ9HCU5 417 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 ASNSD1Q9NWL6 643 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 CYTH4Q9UIA0 394 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 PPM1HQ9ULR3 514 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 PLXNA2O75051 1894 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 ATMQ13315 3056 aa8.91□□□□□ -0.98
VRK1-206ENST00000557222 SHROOM3Q8TF72 1996 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 LOC100996750A0A140TA64 210 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 TEX51A0A1B0GUA7 166 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 BICDL2A1A5D9 508 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 GOLGA6L4A6NEF3 574 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 C1QTNF3-AMACRE9PGA6 284 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 FAM229AH3BQW9 127 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 WNT9AO14904 365 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 MCF2LO15068 1137 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 SASH3O75995 380 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 MOCS2O96007 188 aaPredicted RBP8.9□□□□□ -0.98
VRK1-206ENST00000557222 CCR1P32246 355 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 ACTN2P35609 894 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 SNX16P57768 344 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 CDK17Q00537 523 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 BNIP3Q12983 259 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 DNAJC3Q13217 504 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 CCDC40Q4G0X9 1142 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 SETMARQ53H47 684 aaPredicted RBP8.9□□□□□ -0.98
VRK1-206ENST00000557222 ZC3H12AQ5D1E8 599 aaKnown RBP8.9□□□□□ -0.98
VRK1-206ENST00000557222 EFHC1Q5JVL4 640 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 PRAMEF14Q5SWL7 426 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 ACBD5Q5T8D3 534 aaPredicted RBP8.9□□□□□ -0.98
VRK1-206ENST00000557222 RAP1GAP2Q684P5 730 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 MMS22LQ6ZRQ5 1243 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 SPATS2Q86XZ4 545 aaKnown RBP8.9□□□□□ -0.98
VRK1-206ENST00000557222 CCAR2Q8N163 923 aaKnown RBP8.9□□□□□ -0.98
VRK1-206ENST00000557222 NUDT8Q8WV74 236 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 COL26A1Q96A83 441 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 RPL10LQ96L21 214 aaKnown RBP8.9□□□□□ -0.98
VRK1-206ENST00000557222 KRTAP4-6Q9BYQ5 205 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 USP29Q9HBJ7 922 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 ST7Q9NRC1 585 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 KLHL11Q9NVR0 708 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 SLC25A13Q9UJS0 675 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 AK5Q9Y6K8 562 aa8.9□□□□□ -0.98
VRK1-206ENST00000557222 TP53BP1Q12888 1972 aaPredicted RBP8.9□□□□□ -0.99
VRK1-206ENST00000557222 COL6A6A6NMZ7 2263 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms