RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 RIPPLY3P57055 190 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 DNAJC3Q13217 504 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 ENPP2Q13822 863 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 PDIA5Q14554 519 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 ICAM4Q14773 271 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 STARD3Q14849 445 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 NUMA1Q14980 2115 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 E2F5Q15329 346 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 FUT11Q495W5 492 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 EGFLAMQ63HQ2 1017 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 GRAMD4Q6IC98 578 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 FAM171BQ6P995 826 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 CPLX2Q6PUV4 134 aaKnown RBP4.98□□□□□ -1.61
SCFD1-223ENST00000557076 CRIP3Q6Q6R5 217 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 VSTM1Q6UX27 236 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 KIAA1324Q6UXG2 1013 aaKnown RBP4.98□□□□□ -1.61
SCFD1-223ENST00000557076 ARHGEF18Q6ZSZ5 1173 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 DENND5BQ6ZUT9 1274 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 SPRED1Q7Z699 444 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 DAW1Q8N136 415 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 TMEM86AQ8N2M4 240 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 TMEM161BQ8NDZ6 487 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 STKLD1Q8NE28 680 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 SAP25Q8TEE9 199 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 KCNE4Q8WWG9 221 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 PPP1R14AQ96A00 147 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 SKA1Q96BD8 255 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 MBD6Q96DN6 1003 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 SIPA1Q96FS4 1042 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 ZNF274Q96GC6 653 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-223ENST00000557076 SEC16BQ96JE7 1060 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 XPO6Q96QU8 1125 aaKnown RBP4.98□□□□□ -1.61
SCFD1-223ENST00000557076 PKMYT1Q99640 499 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 PYM1Q9BRP8 204 aaKnown RBP4.98□□□□□ -1.61
SCFD1-223ENST00000557076 TTLL2Q9BWV7 592 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 TRIM4Q9C037 500 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 HAPLN2Q9GZV7 340 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 BHMT2Q9H2M3 363 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 ASB7Q9H672 318 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 CD93Q9NPY3 652 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 HSPBP1Q9NZL4 362 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 WDR35Q9P2L0 1181 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 FBXO10Q9UK96 956 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 GTF3C4Q9UKN8 822 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-223ENST00000557076 C2CD2Q9Y426 696 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 CPQQ9Y646 472 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 UTP20O75691 2785 aaKnown RBP4.98□□□□□ -1.61
SCFD1-223ENST00000557076 LRBAP50851 2863 aa4.98□□□□□ -1.61
SCFD1-223ENST00000557076 A0A0B4J269 797 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 H7BY64 318 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 GABRDO14764 452 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 OGTO15294 1046 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 SLC16A4O15374 487 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 YKT6O15498 198 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 CACNG3O60359 315 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 FZD7O75084 574 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 HIP1RO75146 1068 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 MT-CO3P00414 261 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 CPP00450 1065 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 ACADMP11310 421 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 MYF5P13349 255 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 KRT10P13645 584 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 ACO1P21399 889 aaKnown RBP4.97□□□□□ -1.61
SCFD1-223ENST00000557076 SCP2P22307 547 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 RPS6KB1P23443 525 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 ACP1P24666 158 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 ERCC5P28715 1186 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-223ENST00000557076 BCL6P41182 706 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 RXRGP48443 463 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 LHX1P48742 406 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 TAF6P49848 677 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 PPP2CBP62714 309 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 PPP2CAP67775 309 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 NOP14P78316 857 aaKnown RBP4.97□□□□□ -1.61
SCFD1-223ENST00000557076 ASIC1P78348 528 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 MYL7Q01449 175 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 GRIN1Q05586 938 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 TMEM132DQ14C87 1099 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 CDSNQ15517 529 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 TESK1Q15569 626 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 ANO4Q32M45 955 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 LINC00303Q3SY05 128 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 EMC4Q5J8M3 183 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 ACBD5Q5T8D3 534 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-223ENST00000557076 JADE1Q6IE81 842 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 BLOC1S2Q6QNY1 142 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 C1orf186Q6ZWK4 172 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 HTR3DQ70Z44 454 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 KANSL1Q7Z3B3 1105 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 SCN4BQ8IWT1 228 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 PDCL2Q8N4E4 241 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 KLHL36Q8N4N3 616 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 SCFD1Q8WVM8 642 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 PRCCQ92733 491 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-223ENST00000557076 SLC46A1Q96NT5 459 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 MMS19Q96T76 1030 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 ELF4Q99607 663 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-223ENST00000557076 TIPINQ9BVW5 301 aa4.97□□□□□ -1.61
SCFD1-223ENST00000557076 SCAND2PQ9GZW5 306 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms