RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 TAAR9Q96RI9 348 aa12.79□□□□□ -0.36
PSEN1-220ENST00000557037 KLF6Q99612 283 aaPredicted RBP12.79□□□□□ -0.36
PSEN1-220ENST00000557037 B3GNT4Q9C0J1 378 aa12.79□□□□□ -0.36
PSEN1-220ENST00000557037 GPN2Q9H9Y4 310 aaPredicted RBP12.79□□□□□ -0.36
PSEN1-220ENST00000557037 CYP3A43Q9HB55 503 aa12.79□□□□□ -0.36
PSEN1-220ENST00000557037 AKAP7Q9P0M2 348 aaPredicted RBP12.79□□□□□ -0.36
PSEN1-220ENST00000557037 SLC25A13Q9UJS0 675 aa12.79□□□□□ -0.36
PSEN1-220ENST00000557037 NIPBLQ6KC79 2804 aaeCLIP12.78□□□□□ -0.36
PSEN1-220ENST00000557037 ARHGAP10A1A4S6 786 aa12.78□□□□□ -0.36
PSEN1-220ENST00000557037 EIF3DO15371 548 aaKnown RBP eCLIP12.78□□□□□ -0.36
PSEN1-220ENST00000557037 CAPN5O15484 640 aaPredicted RBP12.78□□□□□ -0.36
PSEN1-220ENST00000557037 STAT6P42226 847 aa12.78□□□□□ -0.36
PSEN1-220ENST00000557037 SLC8A3P57103 927 aa12.78□□□□□ -0.36
PSEN1-220ENST00000557037 PFN3P60673 137 aa12.78□□□□□ -0.36
PSEN1-220ENST00000557037 CLDN10P78369 228 aa12.78□□□□□ -0.36
PSEN1-220ENST00000557037 SGCGQ13326 291 aa12.78□□□□□ -0.36
PSEN1-220ENST00000557037 PTK2BQ14289 1009 aa12.78□□□□□ -0.36
PSEN1-220ENST00000557037 ARHGAP44Q17R89 818 aa12.78□□□□□ -0.36
PSEN1-220ENST00000557037 GOLGA7BQ2TAP0 167 aa12.78□□□□□ -0.36
PSEN1-220ENST00000557037 EFHC2Q5JST6 749 aa12.78□□□□□ -0.36
PSEN1-220ENST00000557037 RAP1GAP2Q684P5 730 aa12.78□□□□□ -0.36
PSEN1-220ENST00000557037 KIAA1161Q6NSJ0 714 aa12.78□□□□□ -0.36
PSEN1-220ENST00000557037 TCTN3Q6NUS6 607 aa12.78□□□□□ -0.36
PSEN1-220ENST00000557037 UNC5BQ8IZJ1 945 aa12.78□□□□□ -0.36
PSEN1-220ENST00000557037 ANKRD52Q8NB46 1076 aa12.78□□□□□ -0.36
PSEN1-220ENST00000557037 CHST14Q8NCH0 376 aa12.78□□□□□ -0.36
PSEN1-220ENST00000557037 RCBTB1Q8NDN9 531 aa12.78□□□□□ -0.36
PSEN1-220ENST00000557037 MARVELD3Q96A59 401 aa12.78□□□□□ -0.36
PSEN1-220ENST00000557037 POM121Q96HA1 1249 aa12.78□□□□□ -0.36
PSEN1-220ENST00000557037 FEM1CQ96JP0 617 aa12.78□□□□□ -0.36
PSEN1-220ENST00000557037 SRRTQ9BXP5 876 aaKnown RBP12.78□□□□□ -0.36
PSEN1-220ENST00000557037 ERRFI1Q9UJM3 462 aaPredicted RBP12.78□□□□□ -0.36
PSEN1-220ENST00000557037 B3GALT1Q9Y5Z6 326 aa12.78□□□□□ -0.36
PSEN1-220ENST00000557037 DNHD1Q96M86 4753 aa12.78□□□□□ -0.36
PSEN1-220ENST00000557037 DIDO1Q9BTC0 2240 aaKnown RBP12.78□□□□□ -0.36
PSEN1-220ENST00000557037 A0A1B0GTL3 188 aa12.77□□□□□ -0.37
PSEN1-220ENST00000557037 IGLON5A6NGN9 336 aa12.77□□□□□ -0.37
PSEN1-220ENST00000557037 MKRN2OSH3BPM6 223 aa12.77□□□□□ -0.37
PSEN1-220ENST00000557037 PIK3R2O00459 728 aa12.77□□□□□ -0.37
PSEN1-220ENST00000557037 DIAPH2O60879 1101 aa12.77□□□□□ -0.37
PSEN1-220ENST00000557037 LDLRP01130 860 aa12.77□□□□□ -0.37
PSEN1-220ENST00000557037 FGF3P11487 239 aaPredicted RBP12.77□□□□□ -0.37
PSEN1-220ENST00000557037 LCP1P13796 627 aa12.77□□□□□ -0.37
PSEN1-220ENST00000557037 RECQLP46063 649 aaPredicted RBP12.77□□□□□ -0.37
PSEN1-220ENST00000557037 NUCB2P80303 420 aa12.77□□□□□ -0.37
PSEN1-220ENST00000557037 PPARDQ03181 441 aa12.77□□□□□ -0.37
PSEN1-220ENST00000557037 MAP9Q49MG5 647 aa12.77□□□□□ -0.37
PSEN1-220ENST00000557037 SPRED1Q7Z699 444 aa12.77□□□□□ -0.37
PSEN1-220ENST00000557037 CHSY1Q86X52 802 aa12.77□□□□□ -0.37
PSEN1-220ENST00000557037 SFTPA2Q8IWL1 248 aa12.77□□□□□ -0.37
PSEN1-220ENST00000557037 CCDC13Q8IYE1 715 aa12.77□□□□□ -0.37
PSEN1-220ENST00000557037 SLC4A11Q8NBS3 891 aa12.77□□□□□ -0.37
PSEN1-220ENST00000557037 RNF34Q969K3 372 aa12.77□□□□□ -0.37
PSEN1-220ENST00000557037 CLIC6Q96NY7 704 aa12.77□□□□□ -0.37
PSEN1-220ENST00000557037 HDAC8Q9BY41 377 aa12.77□□□□□ -0.37
PSEN1-220ENST00000557037 DNAI2Q9GZS0 605 aa12.77□□□□□ -0.37
PSEN1-220ENST00000557037 NIF3L1Q9GZT8 377 aa12.77□□□□□ -0.37
PSEN1-220ENST00000557037 RDH14Q9HBH5 336 aa12.77□□□□□ -0.37
PSEN1-220ENST00000557037 FARP1Q9Y4F1 1045 aaPredicted RBP12.77□□□□□ -0.37
PSEN1-220ENST00000557037 LOC101059948A0A1B0GTJ6 334 aa12.76□□□□□ -0.37
PSEN1-220ENST00000557037 TCP11X1B4DZS4 312 aa12.76□□□□□ -0.37
PSEN1-220ENST00000557037 H3BQV1 296 aa12.76□□□□□ -0.37
PSEN1-220ENST00000557037 M0QYT0 321 aa12.76□□□□□ -0.37
PSEN1-220ENST00000557037 XPO1O14980 1071 aaKnown RBP12.76□□□□□ -0.37
PSEN1-220ENST00000557037 BMP15O95972 392 aa12.76□□□□□ -0.37
PSEN1-220ENST00000557037 PDGFAP04085 211 aa12.76□□□□□ -0.37
PSEN1-220ENST00000557037 TACR2P21452 398 aa12.76□□□□□ -0.37
PSEN1-220ENST00000557037 PLK1P53350 603 aa12.76□□□□□ -0.37
PSEN1-220ENST00000557037 DAOAP59103 153 aa12.76□□□□□ -0.37
PSEN1-220ENST00000557037 SLC12A1Q13621 1099 aa12.76□□□□□ -0.37
PSEN1-220ENST00000557037 AMZ1Q400G9 498 aa12.76□□□□□ -0.37
PSEN1-220ENST00000557037 ARSIQ5FYB1 569 aa12.76□□□□□ -0.37
PSEN1-220ENST00000557037 ARHGAP17Q68EM7 881 aa12.76□□□□□ -0.37
PSEN1-220ENST00000557037 CCDC73Q6ZRK6 1079 aa12.76□□□□□ -0.37
PSEN1-220ENST00000557037 RD3Q7Z3Z2 195 aa12.76□□□□□ -0.37
PSEN1-220ENST00000557037 HID1Q8IV36 788 aa12.76□□□□□ -0.37
PSEN1-220ENST00000557037 CCAR2Q8N163 923 aaKnown RBP12.76□□□□□ -0.37
PSEN1-220ENST00000557037 FSTL5Q8N475 847 aaPredicted RBP12.76□□□□□ -0.37
PSEN1-220ENST00000557037 SH2D3CQ8N5H7 860 aa12.76□□□□□ -0.37
PSEN1-220ENST00000557037 TMIEQ8NEW7 156 aa12.76□□□□□ -0.37
PSEN1-220ENST00000557037 OR2A12Q8NGT7 310 aa12.76□□□□□ -0.37
PSEN1-220ENST00000557037 UBA3Q8TBC4 463 aa12.76□□□□□ -0.37
PSEN1-220ENST00000557037 ART4Q93070 314 aa12.76□□□□□ -0.37
PSEN1-220ENST00000557037 KIAA1143Q96AT1 154 aaPredicted RBP12.76□□□□□ -0.37
PSEN1-220ENST00000557037 TBATAQ96M53 351 aa12.76□□□□□ -0.37
PSEN1-220ENST00000557037 UNKQ9C0B0 810 aaKnown RBP12.76□□□□□ -0.37
PSEN1-220ENST00000557037 TFIP11Q9UBB9 837 aaKnown RBP12.76□□□□□ -0.37
PSEN1-220ENST00000557037 MAP4K5Q9Y4K4 846 aa12.76□□□□□ -0.37
PSEN1-220ENST00000557037 PCDHGA3Q9Y5H0 932 aa12.76□□□□□ -0.37
PSEN1-220ENST00000557037 KCNMB2Q9Y691 235 aa12.76□□□□□ -0.37
PSEN1-220ENST00000557037 K7ERQ8 282 aa12.75□□□□□ -0.37
PSEN1-220ENST00000557037 MT-CO1P00395 513 aa12.75□□□□□ -0.37
PSEN1-220ENST00000557037 PRNPP04156 253 aa12.75□□□□□ -0.37
PSEN1-220ENST00000557037 ALPIP09923 528 aa12.75□□□□□ -0.37
PSEN1-220ENST00000557037 CTSEP14091 401 aa12.75□□□□□ -0.37
PSEN1-220ENST00000557037 TCN2P20062 427 aa12.75□□□□□ -0.37
PSEN1-220ENST00000557037 TXLNAP40222 546 aa12.75□□□□□ -0.37
PSEN1-220ENST00000557037 VASPP50552 380 aaPredicted RBP12.75□□□□□ -0.37
PSEN1-220ENST00000557037 RAD23BP54727 409 aa12.75□□□□□ -0.37
PSEN1-220ENST00000557037 SNRPFP62306 86 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms