RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 NXPE1Q8N323 547 aa10.18□□□□□ -0.78
HNRNPC-228ENST00000557033 ZNF557Q8N988 423 aaPredicted RBP10.18□□□□□ -0.78
HNRNPC-228ENST00000557033 DDX50Q9BQ39 737 aaKnown RBP10.18□□□□□ -0.78
HNRNPC-228ENST00000557033 CRACR2AQ9BSW2 395 aa10.18□□□□□ -0.78
HNRNPC-228ENST00000557033 MIS12Q9H081 205 aa10.18□□□□□ -0.78
HNRNPC-228ENST00000557033 SAMD15Q9P1V8 674 aa10.18□□□□□ -0.78
HNRNPC-228ENST00000557033 MBD1Q9UIS9 605 aaPredicted RBP10.18□□□□□ -0.78
HNRNPC-228ENST00000557033 PLXND1Q9Y4D7 1925 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 MED19A0JLT2 244 aaPredicted RBP10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 VSTM5A8MXK1 200 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 WASH3PC4AMC7 463 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 PIK3R2O00459 728 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 AQP7O14520 342 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 ST8SIA5O15466 376 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 THAP12O43422 761 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 SH3BP5O60239 455 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 ACSL4O60488 711 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 CALCAP01258 141 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 ALBP02768 609 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 FYNP06241 537 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 SNRPB2P08579 225 aaKnown RBP10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 HOXD9P28356 352 aaPredicted RBP10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 MAP2K3P46734 347 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 DHPSP49366 369 aaPredicted RBP10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 STARD3Q14849 445 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 MAN2A1Q16706 1144 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 VWA3BQ502W6 1294 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 STPG1Q5TH74 334 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 DENND1BQ6P3S1 775 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 ABHD17CQ6PCB6 329 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 SYT12Q8IV01 421 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 TMEFF1Q8IYR6 380 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 FRMD1Q8N878 549 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 WFIKKN2Q8TEU8 576 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 CLEC4CQ8WTT0 213 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 MRGPRX1Q96LB2 322 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 SERPINB11Q96P15 392 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 NUP62CLQ9H1M0 184 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 LHX5Q9H2C1 402 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 KCNK4Q9NYG8 393 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 CALCOCO1Q9P1Z2 691 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 CLEC4EQ9ULY5 219 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 PLA2G4CQ9UP65 541 aa10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 LUC7L2Q9Y383 392 aaKnown RBP10.17□□□□□ -0.78
HNRNPC-228ENST00000557033 ZNF891A8MT65 544 aaPredicted RBP10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 BECN2A8MW95 431 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 CBX4O00257 560 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 CAPN9O14815 690 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 MSI1O43347 362 aaKnown RBP10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 SYNCRIPO60506 623 aaKnown RBP10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 TSPAN3O60637 253 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 FKBP9O95302 570 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 CPP00450 1065 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 GLI1P08151 1106 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 CD68P34810 354 aaPredicted RBP10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 HOXD12P35452 270 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 USP8P40818 1118 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 IL12RB1P42701 662 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 SNX16P57768 344 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 YWHAZP63104 245 aaKnown RBP10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 LMAN2Q12907 356 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 MMRN1Q13201 1228 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 ZRSR2Q15696 482 aaKnown RBP10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 ARHGAP44Q17R89 818 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 LYSMD4Q5XG99 296 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 RNF43Q68DV7 783 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 GJB7Q6PEY0 223 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 USP53Q70EK8 1073 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 FKBP9P1Q75LS8 142 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 CEP76Q8TAP6 659 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 SHC3Q92529 594 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 PIGKQ92643 395 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 FAM149B1Q96BN6 582 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 TUBGCP2Q9BSJ2 902 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 LSM14BQ9BX40 385 aaKnown RBP10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 SLC13A1Q9BZW2 595 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 CIPCQ9C0C6 399 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 NDST4Q9H3R1 872 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 POPDC2Q9HBU9 364 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 ITM2CQ9NQX7 267 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 RXFP3Q9NSD7 469 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 EVLQ9UI08 416 aaPredicted RBP10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 PILRBQ9UKJ0 227 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 NAALADL1Q9UQQ1 740 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 FHOD1Q9Y613 1164 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 RAD54BQ9Y620 910 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 ABCA7Q8IZY2 2146 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 NUP205Q92621 2012 aa10.16□□□□□ -0.78
HNRNPC-228ENST00000557033 IGHV1OR15-9A0A0B4J2B8 117 aa10.15□□□□□ -0.78
HNRNPC-228ENST00000557033 CCDC189A1A4V9 331 aa10.15□□□□□ -0.78
HNRNPC-228ENST00000557033 TYW5A2RUC4 315 aaKnown RBP10.15□□□□□ -0.78
HNRNPC-228ENST00000557033 E5RJQ4 531 aa10.15□□□□□ -0.78
HNRNPC-228ENST00000557033 PAPSS1O43252 624 aaPredicted RBP10.15□□□□□ -0.78
HNRNPC-228ENST00000557033 ATP5BP06576 529 aaKnown RBP10.15□□□□□ -0.78
HNRNPC-228ENST00000557033 HLA-FP30511 346 aa10.15□□□□□ -0.78
HNRNPC-228ENST00000557033 OXTRP30559 389 aa10.15□□□□□ -0.78
HNRNPC-228ENST00000557033 PTGER3P43115 390 aa10.15□□□□□ -0.78
HNRNPC-228ENST00000557033 BPIFB4P59827 614 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms