RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 PHF2O75151 1096 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 CAND2O75155 1236 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 RPS6KA5O75582 802 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 TJP3O95049 919 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 CRTAMO95727 393 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 PGK1P00558 417 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 KRT7P08729 469 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 SETSIPP0DME0 302 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 DESP17661 470 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 FGFR4P22455 802 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 AKAP5P24588 427 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 CST5P28325 142 aaPredicted RBP4.65□□□□□ -1.67
SRP54-212ENST00000556992 CTGFP29279 349 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 RPL9P32969 192 aaKnown RBP4.65□□□□□ -1.67
SRP54-212ENST00000556992 MAP2K2P36507 400 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 COILP38432 576 aaPredicted RBP4.65□□□□□ -1.67
SRP54-212ENST00000556992 GPD2P43304 727 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 SSR1P43307 286 aaKnown RBP4.65□□□□□ -1.67
SRP54-212ENST00000556992 GABRB2P47870 512 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 FNTAP49354 379 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 AARSP49588 968 aaKnown RBP eCLIP4.65□□□□□ -1.67
SRP54-212ENST00000556992 CARSP49589 748 aaKnown RBP4.65□□□□□ -1.67
SRP54-212ENST00000556992 NDST1P52848 882 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 SLC8A3P57103 927 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 PSMC1P62191 440 aaKnown RBP4.65□□□□□ -1.67
SRP54-212ENST00000556992 PRKCZQ05513 592 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 CCNG2Q16589 344 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 CYP1B1Q16678 543 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 PTPROQ16827 1216 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 HADHQ16836 314 aaKnown RBP4.65□□□□□ -1.67
SRP54-212ENST00000556992 GLIPR1L2Q4G1C9 344 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 FAM47CQ5HY64 1035 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 FBXO47Q5MNV8 452 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 CFAP58Q5T655 872 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 C9orf57Q5W0N0 161 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 TWF2Q6IBS0 349 aaKnown RBP4.65□□□□□ -1.67
SRP54-212ENST00000556992 CXCL17Q6UXB2 119 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 SCARA5Q6ZMJ2 495 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 MRPL10Q7Z7H8 261 aaKnown RBP4.65□□□□□ -1.67
SRP54-212ENST00000556992 PHLDB2Q86SQ0 1253 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 RNF180Q86T96 592 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 ZDHHC17Q8IUH5 632 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 ZC3H7AQ8IWR0 971 aaKnown RBP4.65□□□□□ -1.67
SRP54-212ENST00000556992 CRYBG2Q8N1P7 616 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 MREGQ8N565 214 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 NIPA2Q8N8Q9 360 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 PRELID2Q8N945 189 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 C3orf20Q8ND61 904 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 KLHDC9Q8NEP7 349 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 APPL2Q8NEU8 664 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 ST13P5Q8NFI4 369 aaPredicted RBP4.65□□□□□ -1.67
SRP54-212ENST00000556992 ATL2Q8NHH9 583 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 IPO4Q8TEX9 1081 aaKnown RBP4.65□□□□□ -1.67
SRP54-212ENST00000556992 GRK7Q8WTQ7 553 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 TRIB2Q92519 343 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 KRT35Q92764 455 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 PTPRN2Q92932 1015 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 LRRC45Q96CN5 670 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 RBM41Q96IZ5 413 aaKnown RBP4.65□□□□□ -1.67
SRP54-212ENST00000556992 TNIP3Q96KP6 325 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 GPHA2Q96T91 129 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 CDC6Q99741 560 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 PRRX2Q99811 253 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 EIF2AQ9BY44 585 aaKnown RBP4.65□□□□□ -1.67
SRP54-212ENST00000556992 FRMD8P1Q9BZ68 369 aaPredicted RBP4.65□□□□□ -1.67
SRP54-212ENST00000556992 FAM129AQ9BZQ8 928 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 ELOVL4Q9GZR5 314 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 SDCBP2Q9H190 292 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 LRRC19Q9H756 370 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 SMYD3Q9H7B4 428 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 ASNSD1Q9NWL6 643 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 HESX1Q9UBX0 185 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 AMACRQ9UHK6 382 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 NFU1Q9UMS0 254 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 GABRQQ9UN88 632 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 ST3GAL5Q9UNP4 418 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.65□□□□□ -1.67
SRP54-212ENST00000556992 TRPV2Q9Y5S1 764 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 SNX9Q9Y5X1 595 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 SQORQ9Y6N5 450 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 MYH8P13535 1937 aa4.65□□□□□ -1.67
SRP54-212ENST00000556992 TRBV23-1A0A0A0MS06 115 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 TCRBV5S1A1TA0A578 114 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 A6NNZ2 444 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 A8MXQ7 604 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 F8VP50 259 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 NDC80O14777 642 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 TTI1O43156 1089 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 DAPK3O43293 454 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 HSF2BPO75031 334 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 RNF8O76064 485 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 RECQL4O94761 1208 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 GAS8O95995 478 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 CHRNA1P02708 482 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 ASGR1P07306 291 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 LRPAP1P30533 357 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 RFC1P35251 1148 aaPredicted RBP4.64□□□□□ -1.67
SRP54-212ENST00000556992 PCK1P35558 622 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 THPOP40225 353 aa4.64□□□□□ -1.67
SRP54-212ENST00000556992 ACADSBP45954 432 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms