RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 WASH3PC4AMC7 463 aa16.71■□□□□ 0.27
PCNX4-213ENST00000556907 RAD51CO43502 376 aa16.71■□□□□ 0.27
PCNX4-213ENST00000556907 SNAP91O60641 907 aa16.71■□□□□ 0.27
PCNX4-213ENST00000556907 ZNF189O75820 626 aaPredicted RBP16.71■□□□□ 0.27
PCNX4-213ENST00000556907 ITGAVP06756 1048 aa16.71■□□□□ 0.27
PCNX4-213ENST00000556907 SRCP12931 536 aa16.71■□□□□ 0.27
PCNX4-213ENST00000556907 PRKCHP24723 683 aa16.71■□□□□ 0.27
PCNX4-213ENST00000556907 PTGIRP43119 386 aa16.71■□□□□ 0.27
PCNX4-213ENST00000556907 PAPOLAP51003 745 aaKnown RBP16.71■□□□□ 0.27
PCNX4-213ENST00000556907 EIF3EP60228 445 aaKnown RBP16.71■□□□□ 0.27
PCNX4-213ENST00000556907 ARF5P84085 180 aa16.71■□□□□ 0.27
PCNX4-213ENST00000556907 LMNB2Q03252 620 aa16.71■□□□□ 0.27
PCNX4-213ENST00000556907 CSTF1Q05048 431 aaKnown RBP16.71■□□□□ 0.27
PCNX4-213ENST00000556907 IL10RBQ08334 325 aa16.71■□□□□ 0.27
PCNX4-213ENST00000556907 DLG2Q15700 870 aa16.71■□□□□ 0.27
PCNX4-213ENST00000556907 RASSF3Q86WH2 238 aa16.71■□□□□ 0.27
PCNX4-213ENST00000556907 MAML2Q8IZL2 1156 aaPredicted RBP16.71■□□□□ 0.27
PCNX4-213ENST00000556907 PCDH20Q8N6Y1 951 aaKnown RBP16.71■□□□□ 0.27
PCNX4-213ENST00000556907 NPWQ8N729 165 aa16.71■□□□□ 0.27
PCNX4-213ENST00000556907 OR2T3Q8NH03 318 aa16.71■□□□□ 0.27
PCNX4-213ENST00000556907 FRS2Q8WU20 508 aa16.71■□□□□ 0.27
PCNX4-213ENST00000556907 CELF6Q96J87 481 aaKnown RBP16.71■□□□□ 0.27
PCNX4-213ENST00000556907 ZNF599Q96NL3 588 aa16.71■□□□□ 0.27
PCNX4-213ENST00000556907 QKIQ96PU8 341 aaKnown RBP eCLIP16.71■□□□□ 0.274e-7■□□□□ 9.1
PCNX4-213ENST00000556907 FAM118BQ9BPY3 351 aa16.71■□□□□ 0.27
PCNX4-213ENST00000556907 CD248Q9HCU0 757 aa16.71■□□□□ 0.27
PCNX4-213ENST00000556907 ZDHHC4Q9NPG8 344 aa16.71■□□□□ 0.27
PCNX4-213ENST00000556907 DTLQ9NZJ0 730 aa16.71■□□□□ 0.27
PCNX4-213ENST00000556907 AMACRQ9UHK6 382 aa16.71■□□□□ 0.27
PCNX4-213ENST00000556907 DRG1Q9Y295 367 aaKnown RBP16.71■□□□□ 0.27
PCNX4-213ENST00000556907 MUC22E2RYF6 1773 aaPredicted RBP16.71■□□□□ 0.27
PCNX4-213ENST00000556907 CFAP69A5D8W1 941 aa16.7■□□□□ 0.26
PCNX4-213ENST00000556907 HACD1B0YJ81 288 aa16.7■□□□□ 0.26
PCNX4-213ENST00000556907 DFFAO00273 331 aa16.7■□□□□ 0.26
PCNX4-213ENST00000556907 ALOX15BO15296 676 aa16.7■□□□□ 0.26
PCNX4-213ENST00000556907 PRAMEF11O60813 436 aa16.7■□□□□ 0.26
PCNX4-213ENST00000556907 RNASEH1O60930 286 aaKnown RBP16.7■□□□□ 0.26
PCNX4-213ENST00000556907 TDGF1P13385 188 aa16.7■□□□□ 0.26
PCNX4-213ENST00000556907 CNR2P34972 360 aa16.7■□□□□ 0.26
PCNX4-213ENST00000556907 WASP42768 502 aa16.7■□□□□ 0.26
PCNX4-213ENST00000556907 STK19P49842 368 aaPredicted RBP16.7■□□□□ 0.26
PCNX4-213ENST00000556907 DR1Q01658 176 aa16.7■□□□□ 0.26
PCNX4-213ENST00000556907 ZBTB16Q05516 673 aa16.7■□□□□ 0.26
PCNX4-213ENST00000556907 ZNF33AQ06730 810 aa16.7■□□□□ 0.26
PCNX4-213ENST00000556907 SFSWAPQ12872 951 aaKnown RBP16.7■□□□□ 0.26
PCNX4-213ENST00000556907 SNX1Q13596 522 aa16.7■□□□□ 0.26
PCNX4-213ENST00000556907 ELAVL3Q14576 367 aaKnown RBP16.7■□□□□ 0.26
PCNX4-213ENST00000556907 ACCSLQ4AC99 568 aa16.7■□□□□ 0.26
PCNX4-213ENST00000556907 TIGD7Q6NT04 549 aaPredicted RBP16.7■□□□□ 0.26
PCNX4-213ENST00000556907 SYDE1Q6ZW31 735 aaPredicted RBP16.7■□□□□ 0.26
PCNX4-213ENST00000556907 MAATS1Q7Z4T9 603 aa16.7■□□□□ 0.26
PCNX4-213ENST00000556907 DSG4Q86SJ6 1040 aa16.7■□□□□ 0.26
PCNX4-213ENST00000556907 JAMLQ86YT9 394 aa16.7■□□□□ 0.26
PCNX4-213ENST00000556907 CDKL3Q8IVW4 592 aaPredicted RBP16.7■□□□□ 0.26
PCNX4-213ENST00000556907 NSMCE1Q8WV22 266 aa16.7■□□□□ 0.26
PCNX4-213ENST00000556907 NELL1Q92832 810 aa16.7■□□□□ 0.26
PCNX4-213ENST00000556907 FATE1Q969F0 183 aa16.7■□□□□ 0.26
PCNX4-213ENST00000556907 LRRC1Q9BTT6 524 aa16.7■□□□□ 0.26
PCNX4-213ENST00000556907 BRD8Q9H0E9 1235 aa16.7■□□□□ 0.26
PCNX4-213ENST00000556907 SP110Q9HB58 689 aa16.7■□□□□ 0.26
PCNX4-213ENST00000556907 PRSS16Q9NQE7 514 aa16.7■□□□□ 0.26
PCNX4-213ENST00000556907 SAE1Q9UBE0 346 aaPredicted RBP16.7■□□□□ 0.26
PCNX4-213ENST00000556907 UBA2Q9UBT2 640 aaPredicted RBP16.7■□□□□ 0.26
PCNX4-213ENST00000556907 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.7■□□□□ 0.26
PCNX4-213ENST00000556907 IPO11Q9UI26 975 aaKnown RBP16.7■□□□□ 0.26
PCNX4-213ENST00000556907 SCML1Q9UN30 329 aa16.7■□□□□ 0.26
PCNX4-213ENST00000556907 HCN4Q9Y3Q4 1203 aa16.7■□□□□ 0.26
PCNX4-213ENST00000556907 HEY1Q9Y5J3 304 aa16.7■□□□□ 0.26
PCNX4-213ENST00000556907 V9GYY5 206 aaPredicted RBP16.7■□□□□ 0.26
PCNX4-213ENST00000556907 MYLKQ15746 1914 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 TCRBV21S2A2A0A5A6 115 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 TTC34A8MYJ7 566 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 BHMG1C9JSJ3 638 aaPredicted RBP16.69■□□□□ 0.26
PCNX4-213ENST00000556907 PPP1R12AO14974 1030 aaPredicted RBP16.69■□□□□ 0.26
PCNX4-213ENST00000556907 TTI1O43156 1089 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 ECEL1O95672 775 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 GAS8O95995 478 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 MT-CO1P00395 513 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 RBP3P10745 1247 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 GLDCP23378 1020 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 RECQLP46063 649 aaPredicted RBP16.69■□□□□ 0.26
PCNX4-213ENST00000556907 PTPN5P54829 565 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 GALNT2Q10471 571 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 SLC10A2Q12908 348 aaPredicted RBP16.69■□□□□ 0.26
PCNX4-213ENST00000556907 PTK6Q13882 451 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 ERCC6LQ2NKX8 1250 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 C9orf64Q5T6V5 341 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 KIAA1211LQ6NV74 962 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 WDR5BQ86VZ2 330 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 LONP2Q86WA8 852 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 BBS5Q8N3I7 341 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 ATPAF2Q8N5M1 289 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 ATL2Q8NHH9 583 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 PTPRN2Q92932 1015 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 HDAC11Q96DB2 347 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 TSGA13Q96PP4 275 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 ANKZF1Q9H8Y5 726 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 PDFQ9HBH1 243 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 HAUS2Q9NVX0 235 aa16.69■□□□□ 0.26
PCNX4-213ENST00000556907 C2orf42Q9NWW7 574 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms