RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 LIN54Q6MZP7 749 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 C16orf89Q6UX73 402 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 BHLHA9Q7RTU4 235 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 TTC30AQ86WT1 665 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 GATAD2AQ86YP4 633 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 C9orf106Q8NAJ2 232 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 ZNF48Q96MX3 618 aaPredicted RBP5.68□□□□□ -1.5
HIF1A-209ENST00000556827 RMDN3Q96TC7 470 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 VPS16Q9H269 839 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 ABHD10Q9NUJ1 306 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 TUBA8Q9NY65 449 aaPredicted RBP5.68□□□□□ -1.5
HIF1A-209ENST00000556827 ELOVL5Q9NYP7 299 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 KLHL13Q9P2N7 655 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 GRHPRQ9UBQ7 328 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 ZNF112Q9UJU3 913 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 A0A1W2PPC1 479 aa5.67□□□□□ -1.5
HIF1A-209ENST00000556827 C16orf96A6NNT2 1141 aa5.67□□□□□ -1.5
HIF1A-209ENST00000556827 H3BNC9 293 aa5.67□□□□□ -1.5
HIF1A-209ENST00000556827 SYT5O00445 386 aa5.67□□□□□ -1.5
HIF1A-209ENST00000556827 PPEF2O14830 753 aa5.67□□□□□ -1.5
HIF1A-209ENST00000556827 CIAO1O76071 339 aa5.67□□□□□ -1.5
HIF1A-209ENST00000556827 TOP3BO95985 862 aaKnown RBP5.67□□□□□ -1.5
HIF1A-209ENST00000556827 IL15P40933 162 aaPredicted RBP5.67□□□□□ -1.5
HIF1A-209ENST00000556827 JAK3P52333 1124 aa5.67□□□□□ -1.5
HIF1A-209ENST00000556827 GSTO1P78417 241 aa5.67□□□□□ -1.5
HIF1A-209ENST00000556827 MAPK7Q13164 816 aa5.67□□□□□ -1.5
HIF1A-209ENST00000556827 MVPQ14764 893 aaKnown RBP5.67□□□□□ -1.5
HIF1A-209ENST00000556827 SEC23BQ15437 767 aa5.67□□□□□ -1.5
HIF1A-209ENST00000556827 TRIM71Q2Q1W2 868 aaKnown RBP5.67□□□□□ -1.5
HIF1A-209ENST00000556827 PXDC1Q5TGL8 231 aa5.67□□□□□ -1.5
HIF1A-209ENST00000556827 ANKRD44Q8N8A2 993 aa5.67□□□□□ -1.5
HIF1A-209ENST00000556827 PRSS3P2Q8NHM4 247 aa5.67□□□□□ -1.5
HIF1A-209ENST00000556827 DEFB118Q96PH6 123 aa5.67□□□□□ -1.5
HIF1A-209ENST00000556827 FYTTD1Q96QD9 318 aaKnown RBP5.67□□□□□ -1.5
HIF1A-209ENST00000556827 EFHD1Q9BUP0 239 aa5.67□□□□□ -1.5
HIF1A-209ENST00000556827 KATNAL1Q9BW62 490 aa5.67□□□□□ -1.5
HIF1A-209ENST00000556827 ADGRE3Q9BY15 652 aa5.67□□□□□ -1.5
HIF1A-209ENST00000556827 USP44Q9H0E7 712 aa5.67□□□□□ -1.5
HIF1A-209ENST00000556827 SIL1Q9H173 461 aa5.67□□□□□ -1.5
HIF1A-209ENST00000556827 TP63Q9H3D4 680 aaPredicted RBP5.67□□□□□ -1.5
HIF1A-209ENST00000556827 MLXIPQ9HAP2 919 aa5.67□□□□□ -1.5
HIF1A-209ENST00000556827 DACT1Q9NYF0 836 aa5.67□□□□□ -1.5
HIF1A-209ENST00000556827 PSME4Q14997 1843 aa5.67□□□□□ -1.5
HIF1A-209ENST00000556827 TNRC18O15417 2968 aaPredicted RBP5.67□□□□□ -1.5
HIF1A-209ENST00000556827 CYP2D7A0A087X1C5 515 aa5.66□□□□□ -1.5
HIF1A-209ENST00000556827 KIF28PB7ZC32 967 aa5.66□□□□□ -1.5
HIF1A-209ENST00000556827 NBNO60934 754 aa5.66□□□□□ -1.5
HIF1A-209ENST00000556827 PNLIPRP1P54315 467 aa5.66□□□□□ -1.5
HIF1A-209ENST00000556827 WDR5P61964 334 aaKnown RBP5.66□□□□□ -1.5
HIF1A-209ENST00000556827 ZNF268Q14587 947 aaPredicted RBP5.66□□□□□ -1.5
HIF1A-209ENST00000556827 KPNB1Q14974 876 aaKnown RBP5.66□□□□□ -1.5
HIF1A-209ENST00000556827 ERAP2Q6P179 960 aa5.66□□□□□ -1.5
HIF1A-209ENST00000556827 ACSM6Q6P461 480 aa5.66□□□□□ -1.5
HIF1A-209ENST00000556827 RANBP10Q6VN20 620 aa5.66□□□□□ -1.5
HIF1A-209ENST00000556827 KYAT3Q6YP21 454 aaKnown RBP5.66□□□□□ -1.5
HIF1A-209ENST00000556827 CACNA2D3Q8IZS8 1091 aa5.66□□□□□ -1.5
HIF1A-209ENST00000556827 MYCT1Q8N699 235 aa5.66□□□□□ -1.5
HIF1A-209ENST00000556827 ANKRD13CQ8N6S4 541 aa5.66□□□□□ -1.5
HIF1A-209ENST00000556827 OVCA2Q8WZ82 227 aa5.66□□□□□ -1.5
HIF1A-209ENST00000556827 NPIPB3Q92617 1050 aa5.66□□□□□ -1.5
HIF1A-209ENST00000556827 FAM118BQ9BPY3 351 aa5.66□□□□□ -1.5
HIF1A-209ENST00000556827 MECRQ9BV79 373 aa5.66□□□□□ -1.5
HIF1A-209ENST00000556827 ELOVL1Q9BW60 279 aa5.66□□□□□ -1.5
HIF1A-209ENST00000556827 SORBS1Q9BX66 1292 aaKnown RBP5.66□□□□□ -1.5
HIF1A-209ENST00000556827 IDI2Q9BXS1 227 aa5.66□□□□□ -1.5
HIF1A-209ENST00000556827 SPRTNQ9H040 489 aaPredicted RBP5.66□□□□□ -1.5
HIF1A-209ENST00000556827 MAGEH1Q9H213 219 aa5.66□□□□□ -1.5
HIF1A-209ENST00000556827 SMC4Q9NTJ3 1288 aa5.66□□□□□ -1.5
HIF1A-209ENST00000556827 FBXO28Q9NVF7 368 aa5.66□□□□□ -1.5
HIF1A-209ENST00000556827 AGTPBP1Q9UPW5 1226 aa5.66□□□□□ -1.5
HIF1A-209ENST00000556827 AFG3L2Q9Y4W6 797 aa5.66□□□□□ -1.5
HIF1A-209ENST00000556827 SALL1Q9NSC2 1324 aa5.66□□□□□ -1.5
HIF1A-209ENST00000556827 TMEM232C9JQI7 657 aa5.65□□□□□ -1.5
HIF1A-209ENST00000556827 PPP6R2O75170 966 aa5.65□□□□□ -1.5
HIF1A-209ENST00000556827 MMP8P22894 467 aa5.65□□□□□ -1.5
HIF1A-209ENST00000556827 THBS4P35443 961 aa5.65□□□□□ -1.5
HIF1A-209ENST00000556827 BTDP43251 543 aa5.65□□□□□ -1.5
HIF1A-209ENST00000556827 VPS41P49754 854 aa5.65□□□□□ -1.5
HIF1A-209ENST00000556827 IRX3P78415 501 aaPredicted RBP5.65□□□□□ -1.5
HIF1A-209ENST00000556827 DAZAP2Q15038 168 aaPredicted RBP5.65□□□□□ -1.5
HIF1A-209ENST00000556827 RABEP1Q15276 862 aa5.65□□□□□ -1.5
HIF1A-209ENST00000556827 FAM110CQ1W6H9 321 aa5.65□□□□□ -1.5
HIF1A-209ENST00000556827 ALDH1L2Q3SY69 923 aa5.65□□□□□ -1.5
HIF1A-209ENST00000556827 ANKRD40Q6AI12 368 aa5.65□□□□□ -1.5
HIF1A-209ENST00000556827 ATF7IPQ6VMQ6 1270 aa5.65□□□□□ -1.5
HIF1A-209ENST00000556827 NRSN1Q8IZ57 195 aa5.65□□□□□ -1.5
HIF1A-209ENST00000556827 SCAMP5Q8TAC9 235 aa5.65□□□□□ -1.5
HIF1A-209ENST00000556827 NEUROD6Q96NK8 337 aa5.65□□□□□ -1.5
HIF1A-209ENST00000556827 API5Q9BZZ5 524 aaKnown RBP5.65□□□□□ -1.5
HIF1A-209ENST00000556827 OSBPL5Q9H0X9 879 aaPredicted RBP5.65□□□□□ -1.5
HIF1A-209ENST00000556827 TRNAU1APQ9NX07 287 aaKnown RBP5.65□□□□□ -1.5
HIF1A-209ENST00000556827 GAR1Q9NY12 217 aaKnown RBP5.65□□□□□ -1.5
HIF1A-209ENST00000556827 RAI14Q9P0K7 980 aa5.65□□□□□ -1.5
HIF1A-209ENST00000556827 SEMA5BQ9P283 1151 aa5.65□□□□□ -1.5
HIF1A-209ENST00000556827 RAB21Q9UL25 225 aa5.65□□□□□ -1.5
HIF1A-209ENST00000556827 HEMK1Q9Y5R4 338 aaPredicted RBP5.65□□□□□ -1.5
HIF1A-209ENST00000556827 LOC105369274A0A096LPK9 316 aa5.64□□□□□ -1.51
HIF1A-209ENST00000556827 LOC102723532A0A0G2JNH3 316 aa5.64□□□□□ -1.51
HIF1A-209ENST00000556827 GXYLT2A0PJZ3 443 aa5.64□□□□□ -1.51
HIF1A-209ENST00000556827 FAM90A18PA6NE21 464 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms