RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 RHBDD1Q8TEB9 315 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 FRS2Q8WU20 508 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 FAM172AQ8WUF8 416 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 ALG14Q96F25 216 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 SERAC1Q96JX3 654 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 PARVAQ9NVD7 372 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 CUEDC1Q9NWM3 386 aaPredicted RBP7.49□□□□□ -1.21
SCFD1-222ENST00000556768 VPS51Q9UID3 782 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 PPM1HQ9ULR3 514 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 APOBEC2Q9Y235 224 aaKnown RBP7.49□□□□□ -1.21
SCFD1-222ENST00000556768 PCDHGB2Q9Y5G2 931 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 OR51B4Q9Y5P0 310 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 A0A0D9SEW6 157 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 CXorf51AA0A1B0GTR3 108 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 A6NJY4 79 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 VILLO15195 856 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 FLRT2O43155 660 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 RAMP2O60895 175 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 MT-CO1P00395 513 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 TPM3P06753 285 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 PLEKP08567 350 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-222ENST00000556768 SRCP12931 536 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 CD59P13987 128 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 VAV1P15498 845 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 RHOQP17081 205 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 RRM1P23921 792 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 CD38P28907 300 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 CHRNA3P32297 505 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 GRK6P43250 576 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 MAPKAPK2P49137 400 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 ZNF143P52747 638 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-222ENST00000556768 ADPRHP54922 357 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 GSCP56915 257 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-222ENST00000556768 GNA12Q03113 381 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 OVGP1Q12889 678 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 C15orf59Q2T9L4 293 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-222ENST00000556768 KIF19Q2TAC6 998 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 SETMARQ53H47 684 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-222ENST00000556768 SFMBT2Q5VUG0 894 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 OTUD1Q5VV17 481 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-222ENST00000556768 ACAD10Q6JQN1 1059 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 NEK5Q6P3R8 708 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 WDR59Q6PJI9 974 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 VPS36Q86VN1 386 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 ATCAYQ86WG3 371 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 AADATQ8N5Z0 425 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 TMIEQ8NEW7 156 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 OR2I1PQ8NGU4 316 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 PCDHB18PQ96TA0 734 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 CNPY3Q9BT09 278 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 CEP44Q9C0F1 390 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 MAGEH1Q9H213 219 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 ACBD3Q9H3P7 528 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 CATSPERBQ9H7T0 1116 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 GDF3Q9NR23 364 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 TMPRSS4Q9NRS4 437 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 SERGEFQ9UGK8 458 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 DMTF1Q9Y222 760 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 WDFY3Q8IZQ1 3526 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 SPAARA0A1B0GVQ0 90 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 A0A1W2PQC6 194 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 ZSCAN5CA6NGD5 496 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-222ENST00000556768 YKT6O15498 198 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 TEX33O43247 280 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 SNAP91O60641 907 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 RNGTTO60942 597 aaKnown RBP7.48□□□□□ -1.21
SCFD1-222ENST00000556768 RTN2O75298 545 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 GJB3O75712 270 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 RNF8O76064 485 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 IGHV4-34P06331 123 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 EPHB2P29323 1055 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 CCT8P50990 548 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 IRAK1P51617 712 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 PSMA6P60900 246 aaKnown RBP7.48□□□□□ -1.21
SCFD1-222ENST00000556768 NRG1Q02297 640 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-222ENST00000556768 RAD51Q06609 339 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 KLHL30Q0D2K2 578 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 CNTN1Q12860 1018 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 ASIC2Q16515 512 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 KLHL40Q2TBA0 621 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 POM121L1PQ3SYA9 428 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 HS1BP3Q53T59 392 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 FBXL19Q6PCT2 694 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 LINGO4Q6UY18 593 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 BNIPLQ7Z465 357 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 ZNF683Q8IZ20 524 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 RYBPQ8N488 228 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-222ENST00000556768 OXR1Q8N573 874 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 PCDH20Q8N6Y1 951 aaKnown RBP7.48□□□□□ -1.21
SCFD1-222ENST00000556768 OR52K2Q8NGK3 314 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 OR2A12Q8NGT7 310 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 CENPIQ92674 756 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-222ENST00000556768 NTAN1Q96AB6 310 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 TBC1D31Q96DN5 1066 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 MCEEQ96PE7 176 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 NCAPGQ9BPX3 1015 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 EDEM3Q9BZQ6 932 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 PREBQ9HCU5 417 aa7.48□□□□□ -1.21
SCFD1-222ENST00000556768 MRPL47Q9HD33 250 aaKnown RBP7.48□□□□□ -1.21
SCFD1-222ENST00000556768 ANLNQ9NQW6 1124 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms