RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 HTRA3P83110 453 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 RIPK1Q13546 671 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 ITGA9Q13797 1035 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 RFWD3Q6PCD5 774 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 NAPRTQ6XQN6 538 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 CCDC91Q7Z6B0 441 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 NPAS4Q8IUM7 802 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 CRIPAKQ8N1N5 446 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 UMODL1-AS1Q8N2C9 162 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 PGBD5Q8N414 524 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 FAM13CQ8NE31 585 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 PPHLN1Q8NEY8 458 aaKnown RBP10.27□□□□□ -0.77
TMEM260-211ENST00000556648 ZNF296Q8WUU4 475 aaPredicted RBP10.27□□□□□ -0.77
TMEM260-211ENST00000556648 SEPT8Q92599 483 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 PABPC5Q96DU9 382 aaKnown RBP10.27□□□□□ -0.77
TMEM260-211ENST00000556648 GPR22Q99680 433 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 VN1R3Q9BXE9 311 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 FSD1LQ9BXM9 530 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 SAR1AQ9NR31 198 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 THAP1Q9NVV9 213 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 TMEM248Q9NWD8 314 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 PPARGC1AQ9UBK2 798 aaKnown RBP10.27□□□□□ -0.77
TMEM260-211ENST00000556648 LNPEPQ9UIQ6 1025 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 L3MBTL1Q9Y468 752 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 IGLV3-10A0A075B6K4 115 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.26□□□□□ -0.77
TMEM260-211ENST00000556648 SLC38A8A6NNN8 435 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.26□□□□□ -0.77
TMEM260-211ENST00000556648 CHUKO15111 745 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 NEBLO76041 1014 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 AHSGP02765 367 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 ALDH2P05091 517 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 COL6A1P12109 1028 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 CPA3P15088 417 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 SLC1A2P43004 574 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 CSRP3P50461 194 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 ATN1P54259 1190 aaPredicted RBP10.26□□□□□ -0.77
TMEM260-211ENST00000556648 ALDH18A1P54886 795 aaKnown RBP10.26□□□□□ -0.77
TMEM260-211ENST00000556648 GPR17Q13304 367 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 TUBB3Q13509 450 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 BFSP2Q13515 415 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 UBAP2LQ14157 1087 aaKnown RBP10.26□□□□□ -0.77
TMEM260-211ENST00000556648 CNGA3Q16281 694 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 INSCQ1MX18 579 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 SPDYAQ5MJ70 313 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 PDPK2PQ6A1A2 396 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 ZNF354CQ86Y25 554 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.26□□□□□ -0.77
TMEM260-211ENST00000556648 ATP6V0D2Q8N8Y2 350 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 FBXO27Q8NI29 283 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 NSL1Q96IY1 281 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 BTN2A3PQ96KV6 586 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 RAB3IPQ96QF0 476 aaPredicted RBP10.26□□□□□ -0.77
TMEM260-211ENST00000556648 C1QTNF1Q9BXJ1 281 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 UNKQ9C0B0 810 aaKnown RBP10.26□□□□□ -0.77
TMEM260-211ENST00000556648 TLR8Q9NR97 1041 aaKnown RBP10.26□□□□□ -0.77
TMEM260-211ENST00000556648 TREX1Q9NSU2 369 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 CPSF2Q9P2I0 782 aaKnown RBP10.26□□□□□ -0.77
TMEM260-211ENST00000556648 ACTL7AQ9Y615 435 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 CDY1Q9Y6F8 540 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 CCL22O00626 93 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 TRAFD1O14545 582 aaPredicted RBP10.26□□□□□ -0.77
TMEM260-211ENST00000556648 TIMM44O43615 452 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 RTN3O95197 1032 aaPredicted RBP10.26□□□□□ -0.77
TMEM260-211ENST00000556648 MPOP05164 745 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 ENO1P06733 434 aaKnown RBP10.26□□□□□ -0.77
TMEM260-211ENST00000556648 SBK3P0C264 359 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 SLC2A3P11169 496 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 RALBP11234 206 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 GM2AP17900 193 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 PTPN4P29074 926 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 CCR10P46092 362 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 NDST2P52849 883 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 ABCE1P61221 599 aaKnown RBP10.26□□□□□ -0.77
TMEM260-211ENST00000556648 ITKQ08881 620 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 DBN1Q16643 649 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 VWA5B1Q5TIE3 1220 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 ICE2Q659A1 982 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 RANBP10Q6VN20 620 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.26□□□□□ -0.77
TMEM260-211ENST00000556648 DEFB128Q7Z7B8 93 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 CEP97Q8IW35 865 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 CFAP52Q8N1V2 620 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 SPATA6LQ8N4H0 392 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 KCTD4Q8WVF5 259 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 IMP4Q96G21 291 aaKnown RBP10.26□□□□□ -0.77
TMEM260-211ENST00000556648 RPRD1AQ96P16 312 aaPredicted RBP10.26□□□□□ -0.77
TMEM260-211ENST00000556648 CADM1Q9BY67 442 aaKnown RBP10.26□□□□□ -0.77
TMEM260-211ENST00000556648 PPP1R12CQ9BZL4 782 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 SLC25A51Q9H1U9 297 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 RHOJQ9H4E5 214 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 SP110Q9HB58 689 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 CLIC5Q9NZA1 410 aa10.26□□□□□ -0.77
TMEM260-211ENST00000556648 COL4A6Q14031 1691 aa10.25□□□□□ -0.77
TMEM260-211ENST00000556648 CAPN14A8MX76 684 aa10.25□□□□□ -0.77
TMEM260-211ENST00000556648 TK2O00142 265 aa10.25□□□□□ -0.77
TMEM260-211ENST00000556648 MUSKO15146 869 aa10.25□□□□□ -0.77
TMEM260-211ENST00000556648 TLR5O60602 858 aa10.25□□□□□ -0.77
TMEM260-211ENST00000556648 UPP2O95045 317 aa10.25□□□□□ -0.77
TMEM260-211ENST00000556648 SLC35E2BP0CK96 405 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms