RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 CLTBP09497 229 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 RARBP10826 455 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 DESP17661 470 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 LAG3P18627 525 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 CHMP24386 653 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 RPA1P27694 616 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 CDC25AP30304 524 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 ABCD1P33897 745 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 CCR5P51681 352 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 CHN2P52757 468 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 OAZ1P54368 228 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 ARF3P61204 181 aaPredicted RBP5.4□□□□□ -1.54
SRP54-211ENST00000556445 ARF1P84077 181 aaKnown RBP5.4□□□□□ -1.54
SRP54-211ENST00000556445 GHRHRQ02643 423 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 LRRC63Q05C16 580 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 E2F5Q15329 346 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 BEAN1Q3B7T3 259 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 USH1GQ495M9 461 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 ATXN7L2Q5T6C5 722 aaPredicted RBP5.4□□□□□ -1.54
SRP54-211ENST00000556445 AFMIDQ63HM1 303 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 SPECC1LQ69YQ0 1117 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 ACAD10Q6JQN1 1059 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 MIGA2Q7L4E1 593 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 NIPA1Q7RTP0 329 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 DNAJB7Q7Z6W7 309 aaPredicted RBP5.4□□□□□ -1.54
SRP54-211ENST00000556445 MRGPRGQ86SM5 289 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 VRK3Q8IV63 474 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 CNGA4Q8IV77 575 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 SCYL3Q8IZE3 742 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 ADSSL1Q8N142 457 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 TXLNBQ8N3L3 684 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 GUF1Q8N442 669 aaKnown RBP5.4□□□□□ -1.54
SRP54-211ENST00000556445 AVL9Q8NBF6 648 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.4□□□□□ -1.54
SRP54-211ENST00000556445 GOT1L1Q8NHS2 421 aaPredicted RBP5.4□□□□□ -1.54
SRP54-211ENST00000556445 PROKR1Q8TCW9 393 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 NEK9Q8TD19 979 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 ACER1Q8TDN7 264 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 CRYGNQ8WXF5 182 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 ST8SIA4Q92187 359 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 C12orf42Q96LP6 360 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 TSGA13Q96PP4 275 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 UHRF1Q96T88 793 aaPredicted RBP5.4□□□□□ -1.54
SRP54-211ENST00000556445 YME1L1Q96TA2 773 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 TSG101Q99816 390 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 POLR3CQ9BUI4 534 aaPredicted RBP5.4□□□□□ -1.54
SRP54-211ENST00000556445 BLZF1Q9H2G9 400 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 LDAHQ9H6V9 325 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 TUFT1Q9NNX1 390 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 LANCL2Q9NS86 450 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 TRMT1Q9NXH9 659 aaKnown RBP5.4□□□□□ -1.54
SRP54-211ENST00000556445 ADD3Q9UEY8 706 aaKnown RBP5.4□□□□□ -1.54
SRP54-211ENST00000556445 LIMA1Q9UHB6 759 aaKnown RBP5.4□□□□□ -1.54
SRP54-211ENST00000556445 HACL1Q9UJ83 578 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 OGDHLQ9ULD0 1010 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 PCDHGB5Q9Y5G0 923 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 PASKQ96RG2 1323 aa5.4□□□□□ -1.55
SRP54-211ENST00000556445 LOXHD1Q8IVV2 1947 aa5.4□□□□□ -1.55
SRP54-211ENST00000556445 DOCK1Q14185 1865 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 A0A087X1B8 175 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 AQP12BA6NM10 295 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 DRGXA6NNA5 263 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 MARCH11A6NNE9 402 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 PP2D1A8MPX8 630 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 ISM1B1AKI9 464 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 KCNJ18B7U540 433 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 AKR1B15C9JRZ8 316 aaPredicted RBP5.39□□□□□ -1.55
SRP54-211ENST00000556445 HNRNPDLO14979 420 aaKnown RBP5.39□□□□□ -1.55
SRP54-211ENST00000556445 ZSCAN12O43309 604 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 LPXNO60711 386 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 ENDOD1O94919 500 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 GNA14O95837 355 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 SLC4A1P02730 911 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 P4HA1P13674 534 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 FPR1P21462 350 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 NF2P35240 595 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 PRCPP42785 496 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 ALDH1A3P47895 512 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 HSD17B4P51659 736 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 CLCN2P51788 898 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 PER3P56645 1201 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 UBXN2AP68543 259 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 MRPS35P82673 323 aaKnown RBP5.39□□□□□ -1.55
SRP54-211ENST00000556445 UBE3AQ05086 875 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 KCNJ12Q14500 433 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 CNGA2Q16280 664 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 C3orf36Q3SXR2 165 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 TIGD2Q4W5G0 525 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 CEP55Q53EZ4 464 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 TCP11X2Q5H9J9 407 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 LY6G5CQ5SRR4 150 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 KCNV1Q6PIU1 500 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 CNSTQ6PJW8 725 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 STXBP4Q6ZWJ1 553 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 BTN2A1Q7KYR7 527 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 PLXDC1Q8IUK5 500 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 ATP11CQ8NB49 1132 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 TOR1AIP2Q8NFQ8 470 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 CEP70Q8NHQ1 597 aa5.39□□□□□ -1.55
SRP54-211ENST00000556445 ETNPPLQ8TBG4 499 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms