RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 PARD3BQ8TEW8 1205 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 CKAP2Q8WWK9 683 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 ATG4AQ8WYN0 398 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 CD101Q93033 1021 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 VCPIP1Q96JH7 1222 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 SENP7Q9BQF6 1050 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 C11orf70Q9BRQ4 267 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 LRFN3Q9BTN0 628 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 FRMD8P1Q9BZ68 369 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-241ENST00000556374 PITPNM3Q9BZ71 974 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 OSBPL8Q9BZF1 889 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 DCLK3Q9C098 648 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 POLR3FQ9H1D9 316 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-241ENST00000556374 DEFB129Q9H1M3 183 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 SLC6A15Q9H2J7 730 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 IKZF4Q9H2S9 585 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 VPS37BQ9H9H4 285 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 AS3MTQ9HBK9 375 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 SAYSD1Q9NPB0 183 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 HOMER2Q9NSB8 354 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 ABCF3Q9NUQ8 709 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 PARVAQ9NVD7 372 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 FGFR1OP2Q9NVK5 253 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 PARPBPQ9NWS1 579 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 UCKL1Q9NWZ5 548 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 RBAKQ9NYW8 714 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-241ENST00000556374 NINJ2Q9NZG7 142 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 ADAM22Q9P0K1 906 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 WRAP73Q9P2S5 460 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-241ENST00000556374 THEGQ9P2T0 379 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 PSMC3IPQ9P2W1 217 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-241ENST00000556374 ZNF70Q9UC06 446 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-241ENST00000556374 SHOC2Q9UQ13 582 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 ZNF148Q9UQR1 794 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 STK38LQ9Y2H1 464 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 COQ4Q9Y3A0 265 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 UBIAD1Q9Y5Z9 338 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 IKBKGQ9Y6K9 419 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 USH1CQ9Y6N9 552 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 DOCK1Q14185 1865 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 SIP14410 1827 aa4.57□□□□□ -1.68
ATXN3-241ENST00000556374 MROH7Q68CQ1 1323 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 LRRIQ4A6NIV6 560 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 TISP43B9A030 160 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 ANKRD63C9JTQ0 380 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 POC1B-GALNT4F8VUJ3 575 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 SGK1O00141 431 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 DNALI1O14645 258 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-241ENST00000556374 MAFGO15525 162 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 PRPF4O43172 522 aaKnown RBP eCLIP4.56□□□□□ -1.68
ATXN3-241ENST00000556374 MED7O43513 233 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 MGRN1O60291 552 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 TCEA3O75764 348 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 ZWINTO95229 277 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 LSM8O95777 96 aaKnown RBP4.56□□□□□ -1.68
ATXN3-241ENST00000556374 HLA-DRAP01903 254 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 RALAP11233 206 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 CHRNB2P17787 502 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 CD58P19256 250 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 CA4P22748 312 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 RRM1P23921 792 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 CCND1P24385 295 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 CNGA1P29973 690 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 MSX2P35548 267 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-241ENST00000556374 MSH2P43246 934 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 NPTX2P47972 431 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 ALDH5A1P51649 535 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-241ENST00000556374 ARL4CP56559 192 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 GSCP56915 257 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-241ENST00000556374 SLC8A3P57103 927 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 NCALDP61601 193 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 PRKCEQ02156 737 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 SF3A3Q12874 501 aaKnown RBP eCLIP4.56□□□□□ -1.68
ATXN3-241ENST00000556374 MYO1EQ12965 1108 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 TRPC3Q13507 836 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 CUL2Q13617 745 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 MORF4L2Q15014 288 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 PGM5Q15124 567 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 SIX1Q15475 284 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-241ENST00000556374 TRIP13Q15645 432 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-241ENST00000556374 HADHQ16836 314 aaKnown RBP4.56□□□□□ -1.68
ATXN3-241ENST00000556374 P3H1Q32P28 736 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 FKBP1CQ5VVH2 108 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 KAZNQ674X7 775 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 CCDC62Q6P9F0 684 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 DCUN1D2Q6PH85 259 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 B3GNT9Q6UX72 402 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 SLC30A10Q6XR72 485 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 TRMT1LQ7Z2T5 733 aaKnown RBP4.56□□□□□ -1.68
ATXN3-241ENST00000556374 FAM83AQ86UY5 434 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 PASD1Q8IV76 773 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 ZBTB8OSQ8IWT0 167 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 GPR135Q8IZ08 494 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 RCOR2Q8IZ40 523 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 ZNF808Q8N4W9 903 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-241ENST00000556374 TEX9Q8N6V9 391 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 ATP11CQ8NB49 1132 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 TMEM35BQ8NCS4 154 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 TMEM161BQ8NDZ6 487 aa4.56□□□□□ -1.68
ATXN3-241ENST00000556374 HIPK4Q8NE63 616 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms