RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 GTF3C6Q969F1 213 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 MFSD3Q96ES6 412 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 TMEM176AQ96HP8 235 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 C8orf48Q96LL4 319 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 SLITRK1Q96PX8 696 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 XPO6Q96QU8 1125 aaKnown RBP5.1□□□□□ -1.59
ATXN3-239ENST00000556315 MMTAG2Q9BU76 263 aaKnown RBP5.1□□□□□ -1.59
ATXN3-239ENST00000556315 HELZ2Q9BYK8 2649 aaKnown RBP5.1□□□□□ -1.59
ATXN3-239ENST00000556315 PCED1AQ9H1Q7 454 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 EPB41L1Q9H4G0 881 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 PARVGQ9HBI0 331 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 FBXL7Q9UJT9 491 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 AGO2Q9UKV8 859 aaKnown RBP5.1□□□□□ -1.59
ATXN3-239ENST00000556315 CDH9Q9ULB4 789 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 ODF2LQ9ULJ1 636 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 BTBD3Q9Y2F9 522 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 SH3BP1Q9Y3L3 701 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 PRKAB1Q9Y478 270 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 PCDHA9Q9Y5H5 950 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 SNX9Q9Y5X1 595 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 RAD54BQ9Y620 910 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 STYXL1Q9Y6J8 313 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 WDFY3Q8IZQ1 3526 aa5.1□□□□□ -1.59
ATXN3-239ENST00000556315 APC2O95996 2303 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 ACACAQ13085 2346 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 GON4LQ3T8J9 2241 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 FREM2Q5SZK8 3169 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 IGSF10Q6WRI0 2623 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 WASH3PC4AMC7 463 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 PRRT4C9JH25 899 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 ANKRD63C9JTQ0 380 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 K7ENM7 598 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 KRIT1O00522 736 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 WNT9AO14904 365 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 NPC1O15118 1278 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 TRIM24O15164 1050 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 PRICKLE3O43900 615 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-239ENST00000556315 OPA1O60313 960 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 DFNA5O60443 496 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 JAK2O60674 1132 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 ATP2C2O75185 946 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 PLA2G1BP04054 148 aaKnown RBP5.09□□□□□ -1.59
ATXN3-239ENST00000556315 ITGB3P05106 788 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 FAM163BP0C2L3 166 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 GLI4P10075 376 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 LMO2P25791 158 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 YWHAQP27348 245 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 ACTN2P35609 894 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 CSNK1EP49674 416 aaKnown RBP5.09□□□□□ -1.59
ATXN3-239ENST00000556315 TPMTP51580 245 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 ZNF131P52739 623 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 CXADRP78310 365 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 IRX6P78412 446 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-239ENST00000556315 TFAMQ00059 246 aaKnown RBP5.09□□□□□ -1.59
ATXN3-239ENST00000556315 MYO1EQ12965 1108 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 TARDBPQ13148 414 aaKnown RBP eCLIP5.09□□□□□ -1.59
ATXN3-239ENST00000556315 E2F5Q15329 346 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 SOWAHAQ2M3V2 549 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 INAVAQ3KP66 663 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 SPATS1Q496A3 300 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 HECTD3Q5T447 861 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 SNX30Q5VWJ9 437 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 PCSK4Q6UW60 755 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 CRELD2Q6UXH1 353 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-239ENST00000556315 HTR3DQ70Z44 454 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 CENPQQ7L2Z9 268 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-239ENST00000556315 LIMS2Q7Z4I7 341 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 FGD2Q7Z6J4 655 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 TMPRSS6Q8IU80 811 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 BBS7Q8IWZ6 715 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 ADGRF2Q8IZF7 708 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 NUP93Q8N1F7 819 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 FBXO18Q8NFZ0 1043 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 FNIP1Q8TF40 1166 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 OVCA2Q8WZ82 227 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 PRCCQ92733 491 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-239ENST00000556315 IGSF8Q969P0 613 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 FBXW5Q969U6 566 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 MYLPFQ96A32 169 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 ERLEC1Q96DZ1 483 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 SIPA1Q96FS4 1042 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 CDK5RAP3Q96JB5 506 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 C8orf76Q96K31 380 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 SYT15Q9BQS2 421 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 IPPKQ9H8X2 491 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 CD93Q9NPY3 652 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 DNAJC17Q9NVM6 304 aaKnown RBP5.09□□□□□ -1.59
ATXN3-239ENST00000556315 USP36Q9P275 1121 aaKnown RBP5.09□□□□□ -1.59
ATXN3-239ENST00000556315 FTSJ1Q9UET6 329 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 CHORDC1Q9UHD1 332 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-239ENST00000556315 EIF2B4Q9UI10 523 aaKnown RBP5.09□□□□□ -1.59
ATXN3-239ENST00000556315 ITGA11Q9UKX5 1188 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 PLA2G2DQ9UNK4 145 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 ANKRD6Q9Y2G4 727 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 STON1Q9Y6Q2 735 aa5.09□□□□□ -1.59
ATXN3-239ENST00000556315 LOC400499M0QZD8 3231 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 LAMA1P25391 3075 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 THADAQ6YHU6 1953 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 TCRBV16S1A1N1A0A5B0 115 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 SH3D21A4FU49 640 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms