RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 GOLGA6AQ9NYA3 693 aa11.22□□□□□ -0.61
TMEM260-208ENST00000555905 WHRNQ9P202 907 aa11.22□□□□□ -0.61
TMEM260-208ENST00000555905 SLC8A2Q9UPR5 921 aa11.22□□□□□ -0.61
TMEM260-208ENST00000555905 ATP8A1Q9Y2Q0 1164 aa11.22□□□□□ -0.61
TMEM260-208ENST00000555905 SNX24Q9Y343 169 aa11.22□□□□□ -0.61
TMEM260-208ENST00000555905 MYO18AQ92614 2054 aaKnown RBP11.21□□□□□ -0.61
TMEM260-208ENST00000555905 SPECC1L-ADORA2AF8WAN1 911 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 CTIFO43310 598 aaKnown RBP11.21□□□□□ -0.61
TMEM260-208ENST00000555905 SEC31AO94979 1220 aaKnown RBP11.21□□□□□ -0.61
TMEM260-208ENST00000555905 KAT7O95251 611 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 MT-CO1P00395 513 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 HLA-DQB2P05538 268 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 SRPRAP08240 638 aaKnown RBP11.21□□□□□ -0.61
TMEM260-208ENST00000555905 DLDP09622 509 aaKnown RBP11.21□□□□□ -0.61
TMEM260-208ENST00000555905 GLULP15104 373 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 NFKB1P19838 968 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 CES1P23141 567 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 IVDP26440 423 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 PSMB4P28070 264 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 CTHP32929 405 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 CD68P34810 354 aaPredicted RBP11.21□□□□□ -0.61
TMEM260-208ENST00000555905 CTSOP43234 321 aaPredicted RBP11.21□□□□□ -0.61
TMEM260-208ENST00000555905 RPL21P46778 160 aaKnown RBP11.21□□□□□ -0.61
TMEM260-208ENST00000555905 SOX9P48436 509 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 LMAN1P49257 510 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 RHOAP61586 193 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 ST8SIA6P61647 398 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 BASP1P80723 227 aaKnown RBP11.21□□□□□ -0.61
TMEM260-208ENST00000555905 CAV1Q03135 178 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 CYTH1Q15438 398 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 ELF2Q15723 593 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 ACCSLQ4AC99 568 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 IZUMO3Q5VZ72 239 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 TMEM215Q68D42 235 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 PPIL6Q8IXY8 311 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 PHTF2Q8N3S3 785 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 CNTD1Q8N815 330 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 ATXN2LQ8WWM7 1075 aaKnown RBP11.21□□□□□ -0.61
TMEM260-208ENST00000555905 IFT81Q8WYA0 676 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 SEC14L1Q92503 715 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 MSANTD3Q96H12 275 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 PSKH2Q96QS6 385 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 P2RY13Q9BPV8 354 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 FAM129AQ9BZQ8 928 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 CEP44Q9C0F1 390 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 GDF3Q9NR23 364 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 SLC2A4RGQ9NR83 387 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 ANAPC5Q9UJX4 755 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 TPX2Q9ULW0 747 aaKnown RBP11.21□□□□□ -0.61
TMEM260-208ENST00000555905 PLA2G4CQ9UP65 541 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 ERVW-1Q9UQF0 538 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 HS3ST2Q9Y278 367 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 PIAS3Q9Y6X2 628 aa11.21□□□□□ -0.61
TMEM260-208ENST00000555905 COL4A2P08572 1712 aa11.21□□□□□ -0.62
TMEM260-208ENST00000555905 SPTBN5Q9NRC6 3674 aaKnown RBP11.2□□□□□ -0.62
TMEM260-208ENST00000555905 ESYT3A0FGR9 886 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 PRRT4C9JH25 899 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 F5H423 210 aaPredicted RBP11.2□□□□□ -0.62
TMEM260-208ENST00000555905 SMAPO00193 183 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 DNALI1O14645 258 aaPredicted RBP11.2□□□□□ -0.62
TMEM260-208ENST00000555905 PSMD3O43242 534 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 NARSO43776 548 aaKnown RBP11.2□□□□□ -0.62
TMEM260-208ENST00000555905 ANXA9O76027 345 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 METTL18O95568 372 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 CD160O95971 181 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 APRTP07741 180 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 SRCP12931 536 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 TNFRSF4P43489 277 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 STK19P49842 368 aaPredicted RBP11.2□□□□□ -0.62
TMEM260-208ENST00000555905 GALK1P51570 392 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 TERF1P54274 439 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 NSUN2Q08J23 767 aaKnown RBP eCLIP11.2□□□□□ -0.62
TMEM260-208ENST00000555905 SEMA5AQ13591 1074 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 HLTFQ14527 1009 aaKnown RBP eCLIP11.2□□□□□ -0.62
TMEM260-208ENST00000555905 MORF4L2Q15014 288 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 FAM182AQ5T1J6 154 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 FAXCQ5TGI0 409 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 HOOK3Q86VS8 718 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 PGBD5Q8N414 524 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 SH2D3CQ8N5H7 860 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.2□□□□□ -0.62
TMEM260-208ENST00000555905 TSEN2Q8NCE0 465 aaKnown RBP11.2□□□□□ -0.62
TMEM260-208ENST00000555905 CYB5D2Q8WUJ1 264 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 ISG20Q96AZ6 181 aaKnown RBP11.2□□□□□ -0.62
TMEM260-208ENST00000555905 CHFRQ96EP1 664 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 ZNF419Q96HQ0 510 aaPredicted RBP11.2□□□□□ -0.62
TMEM260-208ENST00000555905 RPL10LQ96L21 214 aaKnown RBP11.2□□□□□ -0.62
TMEM260-208ENST00000555905 FCRL5Q96RD9 977 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 MGME1Q9BQP7 344 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 SLC25A51Q9H1U9 297 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 EPC1Q9H2F5 836 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 ETNK1Q9HBU6 452 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 HEBP1Q9NRV9 189 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 DUSP12Q9UNI6 340 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 AAR2Q9Y312 384 aaKnown RBP11.2□□□□□ -0.62
TMEM260-208ENST00000555905 FCF1Q9Y324 198 aaKnown RBP11.2□□□□□ -0.62
TMEM260-208ENST00000555905 ACTL7AQ9Y615 435 aa11.2□□□□□ -0.62
TMEM260-208ENST00000555905 ERI2A8K979 691 aaKnown RBP11.19□□□□□ -0.62
TMEM260-208ENST00000555905 BHMG1C9JSJ3 638 aaPredicted RBP11.19□□□□□ -0.62
TMEM260-208ENST00000555905 K7ERQ8 282 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms