RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 PUDPQ08623 228 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 GRSF1Q12849 480 aaKnown RBP eCLIP8.52□□□□□ -1.05
LINC00641-201ENST00000555379 ATP13A5Q4VNC0 1218 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 ATP6AP1LQ52LC2 224 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 C9orf57Q5W0N0 161 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 LCLAT1Q6UWP7 414 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 FKBP9P1Q75LS8 142 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 RABEPKQ7Z6M1 372 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 RGL4Q8IZJ4 473 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 ACTRT2Q8TDY3 377 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 RERGQ96A58 199 aaPredicted RBP8.52□□□□□ -1.05
LINC00641-201ENST00000555379 SLC4A9Q96Q91 983 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 BLOC1S4Q9NUP1 217 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 ATXN2Q99700 1313 aaKnown RBP8.52□□□□□ -1.05
LINC00641-201ENST00000555379 SERPINE1P05121 402 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 LSP1P33241 339 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 COPAP53621 1224 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 PLD3Q8IV08 490 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 RMND5BQ96G75 393 aaPredicted RBP8.52□□□□□ -1.05
LINC00641-201ENST00000555379 PPP1R10Q96QC0 940 aaKnown RBP8.52□□□□□ -1.05
LINC00641-201ENST00000555379 EBNA1BP2Q99848 306 aaKnown RBP8.52□□□□□ -1.05
LINC00641-201ENST00000555379 RHOBTB2Q9BYZ6 727 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 CCDC90BQ9GZT6 254 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 PRDM8Q9NQV8 689 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 PCDHGC3Q9UN70 934 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 ADGRA3Q8IWK6 1321 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 ZNF541Q9H0D2 1346 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 IGKV6D-41A0A0C4DH26 115 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 GPR25O00155 361 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 IPO13O94829 963 aaKnown RBP8.52□□□□□ -1.05
LINC00641-201ENST00000555379 LDOC1O95751 146 aaPredicted RBP8.52□□□□□ -1.05
LINC00641-201ENST00000555379 ALADP13716 330 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 AMD1P17707 334 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 BDNFP23560 247 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 VARSP26640 1264 aaKnown RBP8.52□□□□□ -1.05
LINC00641-201ENST00000555379 ARL2P36404 184 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 NDST2P52849 883 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 PLIN5Q00G26 463 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 CCSAPQ6IQ19 270 aaPredicted RBP8.52□□□□□ -1.05
LINC00641-201ENST00000555379 STRA8Q7Z7C7 330 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 KCNMB4Q86W47 210 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 P3H2Q8IVL5 708 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 USP7Q93009 1102 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 FAM161BQ96MY7 647 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 CORO1BQ9BR76 489 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 LMAN2LQ9H0V9 348 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 PCDHB9Q9Y5E1 797 aa8.52□□□□□ -1.05
LINC00641-201ENST00000555379 PHRF1Q9P1Y6 1649 aaKnown RBP8.52□□□□□ -1.05
LINC00641-201ENST00000555379 A0A0B4J269 797 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 ANKDD1BA6NHY2 528 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 FAM220BPB1ANY3 271 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 PRR23D1E9PI22 279 aaPredicted RBP8.51□□□□□ -1.05
LINC00641-201ENST00000555379 SUPT7LO94864 414 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 PIGRP01833 764 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 PRR23D2P0DMB1 279 aaPredicted RBP8.51□□□□□ -1.05
LINC00641-201ENST00000555379 PIM1P11309 404 aaPredicted RBP8.51□□□□□ -1.05
LINC00641-201ENST00000555379 COL6A2P12110 1019 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 CPA3P15088 417 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 LPOP22079 712 aaPredicted RBP8.51□□□□□ -1.05
LINC00641-201ENST00000555379 CD52P31358 61 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 GPR1P46091 355 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 AKR1D1P51857 326 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 SUZ12Q15022 739 aaKnown RBP8.51□□□□□ -1.05
LINC00641-201ENST00000555379 GPR141Q7Z602 305 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 GJD3Q8N144 294 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 TMEM132CQ8N3T6 1108 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 TDRD5Q8NAT2 981 aaKnown RBP8.51□□□□□ -1.05
LINC00641-201ENST00000555379 RASSF5Q8WWW0 418 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 UPF1Q92900 1129 aaKnown RBP eCLIP8.51□□□□□ -1.05
LINC00641-201ENST00000555379 NSL1Q96IY1 281 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 FEM1CQ96JP0 617 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 PPP3R2Q96LZ3 170 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 CHP1Q99653 195 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 CREBZFQ9NS37 354 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 OPTCQ9UBM4 332 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 ZNF112Q9UJU3 913 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 ZNF180Q9UJW8 692 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 CNOT3O75175 753 aaKnown RBP8.51□□□□□ -1.05
LINC00641-201ENST00000555379 SLC35G4P0C7Q5 338 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 TNNI3P19429 210 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 AKAP5P24588 427 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 GPR15P49685 360 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 CNGA3Q16281 694 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 SLC25A52Q3SY17 297 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 FAM92BQ6ZTR7 304 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 SMIM5Q71RC9 77 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 FBXO36Q8NEA4 188 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 CAPSLQ8WWF8 208 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 CSPG4P5Q96PW8 444 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 OSGEPL1Q9H4B0 414 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 DHX33Q9H6R0 707 aaKnown RBP8.51□□□□□ -1.05
LINC00641-201ENST00000555379 ELAC1Q9H777 363 aaKnown RBP8.51□□□□□ -1.05
LINC00641-201ENST00000555379 RUVBL2Q9Y230 463 aaKnown RBP8.51□□□□□ -1.05
LINC00641-201ENST00000555379 A0A087X0T9 212 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 H3BNH8 94 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 RAD51CO43502 376 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 ENTPD5O75356 428 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 FAM228BP0C875 321 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 TNFRSF8P28908 595 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 CCNFP41002 786 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms