RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 FAM174AQ8TBP5 190 aa13.54□□□□□ -0.24
TUBB3-207ENST00000554927 BTN2A3PQ96KV6 586 aa13.54□□□□□ -0.24
TUBB3-207ENST00000554927 SLC4A5Q9BY07 1137 aa13.54□□□□□ -0.24
TUBB3-207ENST00000554927 PDCL3Q9H2J4 239 aa13.54□□□□□ -0.24
TUBB3-207ENST00000554927 EPB41L5Q9HCM4 733 aa13.54□□□□□ -0.24
TUBB3-207ENST00000554927 VPS28Q9UK41 221 aa13.54□□□□□ -0.24
TUBB3-207ENST00000554927 CSNK1G3Q9Y6M4 447 aa13.54□□□□□ -0.24
TUBB3-207ENST00000554927 DOPEY2Q9Y3R5 2298 aa13.53□□□□□ -0.24
TUBB3-207ENST00000554927 NYNRINQ9P2P1 1898 aaKnown RBP13.53□□□□□ -0.24
TUBB3-207ENST00000554927 TDRD6O60522 2096 aaKnown RBP13.53□□□□□ -0.24
TUBB3-207ENST00000554927 TCAF2A6NFQ2 919 aa13.53□□□□□ -0.24
TUBB3-207ENST00000554927 PES1O00541 588 aaKnown RBP13.53□□□□□ -0.24
TUBB3-207ENST00000554927 RIOK3O14730 519 aaKnown RBP13.53□□□□□ -0.24
TUBB3-207ENST00000554927 PLD2O14939 933 aa13.53□□□□□ -0.24
TUBB3-207ENST00000554927 FYNP06241 537 aa13.53□□□□□ -0.24
TUBB3-207ENST00000554927 NME1P15531 152 aaKnown RBP13.53□□□□□ -0.24
TUBB3-207ENST00000554927 JUNDP17535 347 aa13.53□□□□□ -0.24
TUBB3-207ENST00000554927 ITGB6P18564 788 aa13.53□□□□□ -0.24
TUBB3-207ENST00000554927 SLC5A2P31639 672 aa13.53□□□□□ -0.24
TUBB3-207ENST00000554927 CHRNA3P32297 505 aa13.53□□□□□ -0.24
TUBB3-207ENST00000554927 ANP32AP39687 249 aaKnown RBP13.53□□□□□ -0.24
TUBB3-207ENST00000554927 PLK1P53350 603 aa13.53□□□□□ -0.24
TUBB3-207ENST00000554927 BPIFB4P59827 614 aa13.53□□□□□ -0.24
TUBB3-207ENST00000554927 CDK17Q00537 523 aa13.53□□□□□ -0.24
TUBB3-207ENST00000554927 TLE1Q04724 770 aa13.53□□□□□ -0.24
TUBB3-207ENST00000554927 SRSF6Q13247 344 aaKnown RBP13.53□□□□□ -0.24
TUBB3-207ENST00000554927 UBAP2LQ14157 1087 aaKnown RBP13.53□□□□□ -0.24
TUBB3-207ENST00000554927 TGIF1Q15583 401 aa13.53□□□□□ -0.24
TUBB3-207ENST00000554927 EFHC1Q5JVL4 640 aa13.53□□□□□ -0.24
TUBB3-207ENST00000554927 TTC39BQ5VTQ0 682 aaPredicted RBP13.53□□□□□ -0.24
TUBB3-207ENST00000554927 FBXO39Q8N4B4 442 aa13.53□□□□□ -0.24
TUBB3-207ENST00000554927 ATP6V0D2Q8N8Y2 350 aa13.53□□□□□ -0.24
TUBB3-207ENST00000554927 ZSCAN1Q8NBB4 408 aa13.53□□□□□ -0.24
TUBB3-207ENST00000554927 WDR48Q8TAF3 677 aa13.53□□□□□ -0.24
TUBB3-207ENST00000554927 CCDC114Q96M63 670 aa13.53□□□□□ -0.24
TUBB3-207ENST00000554927 CLSTN2Q9H4D0 955 aa13.53□□□□□ -0.24
TUBB3-207ENST00000554927 SYNCQ9H7C4 482 aa13.53□□□□□ -0.24
TUBB3-207ENST00000554927 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.53□□□□□ -0.244e-7■■■□□ 18.7
TUBB3-207ENST00000554927 SALL4Q9UJQ4 1053 aa13.53□□□□□ -0.24
TUBB3-207ENST00000554927 ZFR2Q9UPR6 939 aaKnown RBP13.53□□□□□ -0.24
TUBB3-207ENST00000554927 TLN1Q9Y490 2541 aaKnown RBP13.53□□□□□ -0.24
TUBB3-207ENST00000554927 BOD1L1Q8NFC6 3051 aa13.53□□□□□ -0.24
TUBB3-207ENST00000554927 SPTY2D1-AS1A0A0U1RR47 76 aa13.52□□□□□ -0.25
TUBB3-207ENST00000554927 POM121BA6NF01 834 aa13.52□□□□□ -0.25
TUBB3-207ENST00000554927 E5RJQ4 531 aa13.52□□□□□ -0.25
TUBB3-207ENST00000554927 PPFIA2O75334 1257 aa13.52□□□□□ -0.25
TUBB3-207ENST00000554927 CTSLP07711 333 aa13.52□□□□□ -0.25
TUBB3-207ENST00000554927 GLI1P08151 1106 aa13.52□□□□□ -0.25
TUBB3-207ENST00000554927 GP1BBP13224 206 aa13.52□□□□□ -0.25
TUBB3-207ENST00000554927 PON1P27169 355 aa13.52□□□□□ -0.25
TUBB3-207ENST00000554927 ERCC5P28715 1186 aaPredicted RBP13.52□□□□□ -0.25
TUBB3-207ENST00000554927 RABIFP47224 123 aa13.52□□□□□ -0.25
TUBB3-207ENST00000554927 MTA1Q13330 715 aa13.52□□□□□ -0.25
TUBB3-207ENST00000554927 PDE1CQ14123 709 aaPredicted RBP13.52□□□□□ -0.25
TUBB3-207ENST00000554927 MAN2A1Q16706 1144 aa13.52□□□□□ -0.25
TUBB3-207ENST00000554927 CXorf57Q6NSI4 855 aaKnown RBP13.52□□□□□ -0.25
TUBB3-207ENST00000554927 GJB7Q6PEY0 223 aa13.52□□□□□ -0.25
TUBB3-207ENST00000554927 KYAT3Q6YP21 454 aaKnown RBP13.52□□□□□ -0.25
TUBB3-207ENST00000554927 ERN2Q76MJ5 926 aaKnown RBP13.52□□□□□ -0.25
TUBB3-207ENST00000554927 SH2D3CQ8N5H7 860 aa13.52□□□□□ -0.25
TUBB3-207ENST00000554927 ATP11CQ8NB49 1132 aa13.52□□□□□ -0.25
TUBB3-207ENST00000554927 GRIN3AQ8TCU5 1115 aa13.52□□□□□ -0.25
TUBB3-207ENST00000554927 NAT6Q93015 286 aa13.52□□□□□ -0.25
TUBB3-207ENST00000554927 PPP1R13BQ96KQ4 1090 aa13.52□□□□□ -0.25
TUBB3-207ENST00000554927 BMFQ96LC9 184 aa13.52□□□□□ -0.25
TUBB3-207ENST00000554927 RPRD1AQ96P16 312 aaPredicted RBP13.52□□□□□ -0.25
TUBB3-207ENST00000554927 CCDC3Q9BQI4 270 aa13.52□□□□□ -0.25
TUBB3-207ENST00000554927 NUP62CLQ9H1M0 184 aa13.52□□□□□ -0.25
TUBB3-207ENST00000554927 SEPT10Q9P0V9 454 aa13.52□□□□□ -0.25
TUBB3-207ENST00000554927 DNAJC12Q9UKB3 198 aa13.52□□□□□ -0.25
TUBB3-207ENST00000554927 PCDHGA7Q9Y5G6 932 aa13.52□□□□□ -0.25
TUBB3-207ENST00000554927 HS3ST3A1Q9Y663 406 aa13.52□□□□□ -0.25
TUBB3-207ENST00000554927 LRRK2Q5S007 2527 aa13.51□□□□□ -0.25
TUBB3-207ENST00000554927 AHCTF1Q8WYP5 2266 aa13.51□□□□□ -0.25
TUBB3-207ENST00000554927 SYNJ2BP-COX16A0A087WUM0 186 aa13.51□□□□□ -0.25
TUBB3-207ENST00000554927 KCNU1A8MYU2 1149 aa13.51□□□□□ -0.25
TUBB3-207ENST00000554927 CASC3O15234 703 aaKnown RBP13.51□□□□□ -0.25
TUBB3-207ENST00000554927 TRUB2O95900 331 aaKnown RBP13.51□□□□□ -0.25
TUBB3-207ENST00000554927 PAK4O96013 591 aaPredicted RBP13.51□□□□□ -0.25
TUBB3-207ENST00000554927 PRNPP04156 253 aa13.51□□□□□ -0.25
TUBB3-207ENST00000554927 UGT1A5P35504 534 aa13.51□□□□□ -0.25
TUBB3-207ENST00000554927 VASPP50552 380 aaPredicted RBP13.51□□□□□ -0.25
TUBB3-207ENST00000554927 PDX1P52945 283 aa13.51□□□□□ -0.25
TUBB3-207ENST00000554927 CENPCQ03188 943 aa13.51□□□□□ -0.25
TUBB3-207ENST00000554927 PDCLQ13371 301 aa13.51□□□□□ -0.25
TUBB3-207ENST00000554927 TBR1Q16650 682 aa13.51□□□□□ -0.25
TUBB3-207ENST00000554927 CT47A1Q5JQC4 288 aaPredicted RBP13.51□□□□□ -0.25
TUBB3-207ENST00000554927 MANEAQ5SRI9 462 aa13.51□□□□□ -0.25
TUBB3-207ENST00000554927 SYPL2Q5VXT5 272 aa13.51□□□□□ -0.25
TUBB3-207ENST00000554927 RAB11FIP2Q7L804 512 aa13.51□□□□□ -0.25
TUBB3-207ENST00000554927 SHC3Q92529 594 aa13.51□□□□□ -0.25
TUBB3-207ENST00000554927 LIN37Q96GY3 246 aaPredicted RBP13.51□□□□□ -0.25
TUBB3-207ENST00000554927 PPP1R16AQ96I34 528 aa13.51□□□□□ -0.25
TUBB3-207ENST00000554927 TUBGCP2Q9BSJ2 902 aa13.51□□□□□ -0.25
TUBB3-207ENST00000554927 FEM1AQ9BSK4 669 aa13.51□□□□□ -0.25
TUBB3-207ENST00000554927 SLC17A9Q9BYT1 436 aa13.51□□□□□ -0.25
TUBB3-207ENST00000554927 STRADBQ9C0K7 418 aa13.51□□□□□ -0.25
TUBB3-207ENST00000554927 MUC3BQ9H195 1237 aa13.51□□□□□ -0.25
TUBB3-207ENST00000554927 NDST4Q9H3R1 872 aa13.51□□□□□ -0.25
TUBB3-207ENST00000554927 FAM204AQ9H8W3 233 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms