RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 ZNF667Q5HYK9 610 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 TXNDC11Q6PKC3 985 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 SCARA5Q6ZMJ2 495 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 LRRC6Q86X45 466 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 TMPRSS6Q8IU80 811 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 C4orf33Q8N1A6 199 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 ZNF276Q8N554 614 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 KCTD6Q8NC69 237 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 C3orf58Q8NDZ4 430 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 FBXO36Q8NEA4 188 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 TCP10LQ8TDR4 215 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 CSGALNACT1Q8TDX6 532 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 HASPINQ8TF76 798 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 DNAJC9Q8WXX5 260 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 SMARCD2Q92925 531 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 STMN2Q93045 179 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 MCUR1Q96AQ8 359 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 SKA1Q96BD8 255 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 PTCD3Q96EY7 689 aaKnown RBP11.36□□□□□ -0.59
SRP54-205ENST00000554803 TMEM121Q9BTD3 319 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 SDCBP2Q9H190 292 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 DUSP15Q9H1R2 295 aaPredicted RBP11.36□□□□□ -0.59
SRP54-205ENST00000554803 C1orf21Q9H246 121 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 TRPV4Q9HBA0 871 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 XAB2Q9HCS7 855 aaKnown RBP11.36□□□□□ -0.59
SRP54-205ENST00000554803 ZFATQ9P243 1243 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 STX18Q9P2W9 335 aaKnown RBP11.36□□□□□ -0.59
SRP54-205ENST00000554803 MTRRQ9UBK8 725 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 HAO1Q9UJM8 370 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 KLK13Q9UKR3 277 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 TEX264Q9Y6I9 313 aa11.36□□□□□ -0.59
SRP54-205ENST00000554803 ZNF638Q14966 1978 aaKnown RBP11.36□□□□□ -0.59
SRP54-205ENST00000554803 PTPRDP23468 1912 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 ADAMTS9Q9P2N4 1935 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 ZNF462Q96JM2 2506 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 MYBPHLA2RUH7 354 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 SLC38A8A6NNN8 435 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 PIRO00625 290 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 COPEO14579 308 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 CLGNO14967 610 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 NVLO15381 856 aaKnown RBP11.35□□□□□ -0.59
SRP54-205ENST00000554803 GYG2O15488 501 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 XPOTO43592 962 aaKnown RBP11.35□□□□□ -0.59
SRP54-205ENST00000554803 RBP3P10745 1247 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 TPSB2P20231 275 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 CYP3A5P20815 502 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 PRKCHP24723 683 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 LRPAP1P30533 357 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 VIPR2P41587 438 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 CCR2P41597 374 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 ASPAP45381 313 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 SOX9P48436 509 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 PXNP49023 591 aaPredicted RBP11.35□□□□□ -0.59
SRP54-205ENST00000554803 NR2C2P49116 596 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 CLCNKBP51801 687 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 SARNPP82979 210 aaKnown RBP11.35□□□□□ -0.59
SRP54-205ENST00000554803 RBP5P82980 135 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 KCNJ11Q14654 390 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 KPNB1Q14974 876 aaKnown RBP11.35□□□□□ -0.59
SRP54-205ENST00000554803 TPSAB1Q15661 275 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 COL28A1Q2UY09 1125 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 KYAT3Q6YP21 454 aaKnown RBP11.35□□□□□ -0.59
SRP54-205ENST00000554803 TIFABQ6ZNK6 161 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 ADGRG6Q86SQ4 1221 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 CDKL3Q8IVW4 592 aaPredicted RBP11.35□□□□□ -0.59
SRP54-205ENST00000554803 ADAM32Q8TC27 787 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 HPDLQ96IR7 371 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 UROC1Q96N76 676 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 TSPAN18Q96SJ8 248 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 CORO1BQ9BR76 489 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 NAT9Q9BTE0 207 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 VCX3BQ9H321 246 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 SMYD3Q9H7B4 428 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 GPAMQ9HCL2 828 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 TMEM9BQ9NQ34 198 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 CACNA2D2Q9NY47 1150 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 NXF1Q9UBU9 619 aaKnown RBP11.35□□□□□ -0.59
SRP54-205ENST00000554803 HECTD1Q9ULT8 2610 aa11.35□□□□□ -0.59
SRP54-205ENST00000554803 SPTA1P02549 2419 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 FAM221BA6H8Z2 402 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 EIF4E1BA6NMX2 242 aaKnown RBP11.34□□□□□ -0.59
SRP54-205ENST00000554803 SPECC1L-ADORA2AF8WAN1 911 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 TMEM189-UBE2V1I3L0A0 370 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 CDX4O14627 284 aaPredicted RBP11.34□□□□□ -0.59
SRP54-205ENST00000554803 GSC2O15499 205 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 CIB2O75838 187 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 TRUB2O95900 331 aaKnown RBP11.34□□□□□ -0.59
SRP54-205ENST00000554803 CALCAP01258 141 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 LRG1P02750 347 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 ESRRAP11474 423 aaPredicted RBP11.34□□□□□ -0.59
SRP54-205ENST00000554803 MLNP12872 115 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 ADRA1DP25100 572 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 BRD2P25440 801 aaKnown RBP11.34□□□□□ -0.59
SRP54-205ENST00000554803 RFC1P35251 1148 aaPredicted RBP11.34□□□□□ -0.59
SRP54-205ENST00000554803 SERPINB4P48594 390 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 KPNA1P52294 538 aaPredicted RBP11.34□□□□□ -0.59
SRP54-205ENST00000554803 CDH8P55286 799 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 IRX4P78413 519 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 XIAPP98170 497 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 OGDHQ02218 1023 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms