RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 SLC8A2Q9UPR5 921 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 PIAS3Q9Y6X2 628 aa3.36□□□□□ -1.87
SCFD1-213ENST00000554776 A0A087X0M5 115 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 A0A1B0GX30 115 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 FSD2A1L4K1 749 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 TARSL2A2RTX5 802 aaKnown RBP3.35□□□□□ -1.87
SCFD1-213ENST00000554776 SNAP23O00161 211 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 RHODO00212 210 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 TSPAN4O14817 238 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 DOK2O60496 412 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 ATG13O75143 517 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 GUCY1B2O75343 617 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 NEURL1O76050 574 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 FGF2P09038 288 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 UBL4AP11441 157 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 HOXB9P17482 250 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-213ENST00000554776 TNFRSF1BP20333 461 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 MTNR1AP48039 350 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 UFM1P61960 85 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 ERV3-1Q14264 604 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 SLC18A3Q16572 532 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 PRICKLE4Q2TBC4 344 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 ZNF260Q3ZCT1 412 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 LEXMQ3ZCV2 418 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 SLC9B1Q4ZJI4 515 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 ZNF766Q5HY98 468 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 ZNF667Q5HYK9 610 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 PIK3CD-AS1Q5SR53 167 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 ITPRIPL1Q6GPH6 555 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 ISM2Q6H9L7 571 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 MZT2BQ6NZ67 158 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 GALNT7Q86SF2 657 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 KLBQ86Z14 1044 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 DIS3L2Q8IYB7 885 aaKnown RBP3.35□□□□□ -1.87
SCFD1-213ENST00000554776 MMP21Q8N119 569 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 SLC44A5Q8NCS7 719 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 METTL6Q8TCB7 284 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 CNOT9Q92600 299 aaKnown RBP3.35□□□□□ -1.87
SCFD1-213ENST00000554776 C7orf26Q96N11 449 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 WDR83Q9BRX9 315 aaKnown RBP3.35□□□□□ -1.87
SCFD1-213ENST00000554776 EPHX3Q9H6B9 360 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 TTC12Q9H892 705 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-213ENST00000554776 Q9N2J8 555 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 TBC1D22BQ9NU19 505 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 POT1Q9NUX5 634 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 NLKQ9UBE8 527 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 SLC25A10Q9UBX3 287 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-213ENST00000554776 FBXO2Q9UK22 296 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-213ENST00000554776 PCDHA12Q9UN75 941 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 LAMP3Q9UQV4 416 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 SCINQ9Y6U3 715 aa3.35□□□□□ -1.87
SCFD1-213ENST00000554776 KAT6BQ8WYB5 2073 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 A0A1W2PPC1 479 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 PI4KAP2A4QPH2 592 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 FOXO6A8MYZ6 492 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 PRPF4O43172 522 aaKnown RBP eCLIP3.34□□□□□ -1.87
SCFD1-213ENST00000554776 TGFB1I1O43294 461 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 MSI1O43347 362 aaKnown RBP3.34□□□□□ -1.87
SCFD1-213ENST00000554776 KCNAB3O43448 404 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 CEP104O60308 925 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 NTN1O95631 604 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 NFATC1O95644 943 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 TOMM40O96008 361 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 PSG1P11464 419 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 FCGR2AP12318 317 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 EPHA8P29322 1005 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-213ENST00000554776 ICAM3P32942 547 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 STAT1P42224 750 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 SETQ01105 290 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-213ENST00000554776 GALNT3Q14435 633 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 SMTNL2Q2TAL5 461 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 LCE1AQ5T7P2 110 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 VWA5B1Q5TIE3 1220 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 FAM205BPQ63HN1 556 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 TMTC3Q6ZXV5 915 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 MOB3CQ70IA8 216 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 B4GALNT4Q76KP1 1039 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 CYB5R4Q7L1T6 521 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 GHDCQ8N2G8 530 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 SCAIQ8N9R8 606 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 SETD9Q8NE22 299 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 RAB40AQ8WXH6 277 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 NCSTNQ92542 709 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 NPLQ9BXD5 320 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-213ENST00000554776 PDCL3Q9H2J4 239 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 AAMDCQ9H7C9 122 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 ZNF304Q9HCX3 659 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 BEX4Q9NWD9 120 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-213ENST00000554776 IL1RAPL1Q9NZN1 696 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 PEMTQ9UBM1 199 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 CTNNAL1Q9UBT7 734 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 SARDHQ9UL12 918 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 TNFSF13BQ9Y275 285 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 PSAT1Q9Y617 370 aa3.34□□□□□ -1.87
SCFD1-213ENST00000554776 A0A0A0MQY5 61 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 TEX13CA0A0J9YWL9 993 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 DPPA5A6NC42 116 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 MYMKA6NI61 221 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 A6NNC1 897 aa3.33□□□□□ -1.88
SCFD1-213ENST00000554776 TEX22C9J3V5 150 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms