RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 ZBTB17Q13105 803 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 PPP1R7Q15435 360 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 PPP1R3AQ16821 1122 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 SV2CQ496J9 727 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 ZNF667Q5HYK9 610 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 LRIF1Q5T3J3 769 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 DCAF8Q5TAQ9 597 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 TRMT10BQ6PF06 316 aaKnown RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 NPNTQ6UXI9 565 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 FUNDC1Q8IVP5 155 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 SCUBE1Q8IWY4 988 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 LRRC56Q8IYG6 542 aaPredicted RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 ZBED8Q8IZ13 594 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 PDIK1LQ8N165 341 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 FAM181AQ8N9Y4 354 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 CATSPER1Q8NEC5 780 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 DNAJB8Q8NHS0 232 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 WDR34Q96EX3 536 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 SUSD3Q96L08 255 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 NSMCE3Q96MG7 304 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 TMEM74Q96NL1 305 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 MGME1Q9BQP7 344 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 PDGFDQ9GZP0 370 aaPredicted RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 ZWILCHQ9H900 591 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 SDR39U1Q9NRG7 319 aaPredicted RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 PCDHB8Q9UN66 801 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 TCAF1Q9Y4C2 921 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 A0A1B0GTQ1 180 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 SMIM28A0A1B0GU29 152 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 GAPDHSO14556 408 aaPredicted RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 UGT1A9O60656 530 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 TBX19O60806 448 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 CLASP2O75122 1294 aaKnown RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 ACSL3O95573 720 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 LINC00271P0C7V0 271 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 NPR3P17342 541 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 MSH3P20585 1137 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 PCMT1P22061 227 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 SERPINB3P29508 390 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 LIMS1P48059 325 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 SLC1A6P48664 564 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 CCT8P50990 548 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 CCNHP51946 323 aaPredicted RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 RPS3AP61247 264 aaKnown RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 CTBSQ01459 385 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 KLF10Q13118 480 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 HLTFQ14527 1009 aaKnown RBP eCLIP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 TTLL4Q14679 1199 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 GPNMBQ14956 572 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 ACAP2Q15057 778 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 PDK1Q15118 436 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 BCL2A1Q16548 175 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 GOLGA7BQ2TAP0 167 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 SFT2D3Q587I9 215 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 MTX3Q5HYI7 312 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 CAPRIN2Q6IMN6 1127 aaKnown RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 PKN3Q6P5Z2 889 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 TMEM207Q6UWW9 146 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 NSMFQ6X4W1 530 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 RSPH3Q86UC2 560 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 LRRC8CQ8TDW0 803 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 DNAJC9Q8WXX5 260 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 HAUS1Q96CS2 278 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 KLHL29Q96CT2 875 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 P2RY11Q96G91 374 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 TRMT2BQ96GJ1 504 aaKnown RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 C9orf72Q96LT7 481 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 ZNF560Q96MR9 790 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 MPHOSPH6Q99547 160 aaKnown RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 FUZQ9BT04 418 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 TRAF4Q9BUZ4 470 aaPredicted RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 FAM126AQ9BYI3 521 aaPredicted RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 PRKD2Q9BZL6 878 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 MAGIXQ9H6Y5 334 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 GORASP2Q9H8Y8 452 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 RPF1Q9H9Y2 349 aaKnown RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 GPN2Q9H9Y4 310 aaPredicted RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 UGT1A7Q9HAW7 530 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 UGT1A10Q9HAW8 530 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 UGT1A8Q9HAW9 530 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 RDH14Q9HBH5 336 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 CCM2LQ9NUG4 571 aaPredicted RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 INTS10Q9NVR2 710 aaKnown RBP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.5□□□□□ -1.85
SEC23A-207ENST00000554615 TMEM9Q9P0T7 183 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 HEY2Q9UBP5 337 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 GGT7Q9UJ14 662 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 MID2Q9UJV3 735 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 ANGPTL2Q9UKU9 493 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 PSAT1Q9Y617 370 aa3.5□□□□□ -1.85
SEC23A-207ENST00000554615 RGSL1A5PLK6 1076 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 ARRDC5A6NEK1 342 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 H3BNH8 94 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 UBFD1O14562 309 aaKnown RBP3.49□□□□□ -1.85
SEC23A-207ENST00000554615 PPEF2O14830 753 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 NVLO15381 856 aaKnown RBP3.49□□□□□ -1.85
SEC23A-207ENST00000554615 IRAK2O43187 625 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 LDB2O43679 373 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 BANF1O75531 89 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 KRT37O76014 449 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms