RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 NEIL1Q96FI4 390 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-228ENST00000554592 LRIG1Q96JA1 1093 aa5.22□□□□□ -1.57
ATXN3-228ENST00000554592 CNOT6LQ96LI5 555 aaKnown RBP5.22□□□□□ -1.57
ATXN3-228ENST00000554592 LRGUKQ96M69 825 aa5.22□□□□□ -1.57
ATXN3-228ENST00000554592 JAKMIP1Q96N16 626 aaKnown RBP5.22□□□□□ -1.57
ATXN3-228ENST00000554592 GNRHR2Q96P88 292 aa5.22□□□□□ -1.57
ATXN3-228ENST00000554592 PGLYRP2Q96PD5 576 aa5.22□□□□□ -1.57
ATXN3-228ENST00000554592 BBC3Q96PG8 261 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-228ENST00000554592 GCNAQ96QF7 691 aa5.22□□□□□ -1.57
ATXN3-228ENST00000554592 TCHPQ9BT92 498 aa5.22□□□□□ -1.57
ATXN3-228ENST00000554592 KRTAP17-1Q9BYP8 105 aa5.22□□□□□ -1.57
ATXN3-228ENST00000554592 TTC12Q9H892 705 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-228ENST00000554592 PTPRHQ9HD43 1115 aa5.22□□□□□ -1.57
ATXN3-228ENST00000554592 TUFT1Q9NNX1 390 aa5.22□□□□□ -1.57
ATXN3-228ENST00000554592 SAE1Q9UBE0 346 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-228ENST00000554592 Q9UFV3 132 aa5.22□□□□□ -1.57
ATXN3-228ENST00000554592 SCOCQ9UIL1 159 aa5.22□□□□□ -1.57
ATXN3-228ENST00000554592 TBX20Q9UMR3 447 aa5.22□□□□□ -1.57
ATXN3-228ENST00000554592 MYRFQ9Y2G1 1151 aa5.22□□□□□ -1.57
ATXN3-228ENST00000554592 MYH15Q9Y2K3 1946 aa5.22□□□□□ -1.57
ATXN3-228ENST00000554592 ASPMQ8IZT6 3477 aa5.22□□□□□ -1.57
ATXN3-228ENST00000554592 MYH9P35579 1960 aaKnown RBP5.22□□□□□ -1.57
ATXN3-228ENST00000554592 SDK1Q7Z5N4 2213 aa5.21□□□□□ -1.57
ATXN3-228ENST00000554592 ANKRD11Q6UB99 2663 aaPredicted RBP5.21□□□□□ -1.57
ATXN3-228ENST00000554592 MTCL1Q9Y4B5 1905 aaKnown RBP5.21□□□□□ -1.57
ATXN3-228ENST00000554592 MTMR11A4FU01 709 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 ARHGEF35A5YM69 484 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 GOLGA6CA6NDK9 693 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 GOLGA6BA6NDN3 693 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 FOXS1O43638 330 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 OR4Q2P0C623 313 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 GOLGA6DP0CG33 693 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 MCF2P10911 925 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 ARSAP15289 507 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 TYMPP19971 482 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 CYP3A5P20815 502 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 BCKDHBP21953 392 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 PAX3P23760 479 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 HSPA4P34932 840 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 HOXD12P35452 270 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 AARSP49588 968 aaKnown RBP eCLIP5.21□□□□□ -1.58
ATXN3-228ENST00000554592 FAM193AP78312 1265 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 GFPT1Q06210 699 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-228ENST00000554592 BFSP1Q12934 665 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 MALLQ13021 153 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 SLC14A1Q13336 389 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 GTF2H3Q13889 308 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 ZNF268Q14587 947 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-228ENST00000554592 VEPH1Q14D04 833 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 TRIP6Q15654 476 aaKnown RBP5.21□□□□□ -1.58
ATXN3-228ENST00000554592 DUOXA1Q1HG43 343 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 GFOD2Q3B7J2 385 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 ZNF568Q3ZCX4 644 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 LMBRD2Q68DH5 695 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-228ENST00000554592 ANO7Q6IWH7 933 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 TCTN3Q6NUS6 607 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 DSTYKQ6XUX3 929 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 MON1AQ86VX9 555 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 MIER2Q8N344 545 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 MAB21L3Q8N8X9 362 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 OLIG1Q8TAK6 271 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 ADAMTS14Q8WXS8 1223 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 KIFAP3Q92845 792 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 USP13Q92995 863 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-228ENST00000554592 DVL3Q92997 716 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-228ENST00000554592 FATE1Q969F0 183 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 CLIP3Q96DZ5 547 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 ZNF274Q96GC6 653 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-228ENST00000554592 AIFM3Q96NN9 605 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 LMF1Q96S06 567 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 ACO2Q99798 780 aaKnown RBP5.21□□□□□ -1.58
ATXN3-228ENST00000554592 POLR3CQ9BUI4 534 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-228ENST00000554592 KIFC3Q9BVG8 833 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 TPSD1Q9BZJ3 242 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 CDT1Q9H211 546 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 ECT2Q9H8V3 914 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 KIF9Q9HAQ2 790 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 PLEKHA5Q9HAU0 1116 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 DMRT3Q9NQL9 472 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 TMEM74BQ9NUR3 256 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 TDP1Q9NUW8 608 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 GOLGA6AQ9NYA3 693 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 DNAI1Q9UI46 699 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 PILRBQ9UKJ0 227 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 DOCK6Q96HP0 2047 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 NOTCH4Q99466 2003 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 CEP295Q9C0D2 2601 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 PHLPP2Q6ZVD8 1323 aa5.21□□□□□ -1.58
ATXN3-228ENST00000554592 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 VSTM5A8MXK1 200 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 K7EQS6 105 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 NRP2O60462 931 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 MED24O75448 989 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 SOAT2O75908 522 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 CDKL5O76039 1030 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 LARGE1O95461 756 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 SERPINF2P08697 491 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 CD59P13987 128 aa5.2□□□□□ -1.58
ATXN3-228ENST00000554592 HNRNPLP14866 589 aaKnown RBP eCLIP5.2□□□□□ -1.58
ATXN3-228ENST00000554592 PROZP22891 400 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms