RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 LRCH1Q9Y2L9 728 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 MTO1Q9Y2Z2 717 aaKnown RBP6.11□□□□□ -1.43
VPS33B-203ENST00000554264 KCTD3Q9Y597 815 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 PCDHA9Q9Y5H5 950 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 ARID2Q68CP9 1835 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 MICAL3Q7RTP6 2002 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 CCDC189A1A4V9 331 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 PROB1E7EW31 1015 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 F8W8V4 182 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 DNALI1O14645 258 aaPredicted RBP6.1□□□□□ -1.43
VPS33B-203ENST00000554264 KLF11O14901 512 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 CSDE1O75534 798 aaKnown RBP6.1□□□□□ -1.43
VPS33B-203ENST00000554264 LSM8O95777 96 aaKnown RBP6.1□□□□□ -1.43
VPS33B-203ENST00000554264 KRT16P08779 473 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 RPSAP08865 295 aaKnown RBP6.1□□□□□ -1.43
VPS33B-203ENST00000554264 LINC00271P0C7V0 271 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 TRIM49P0CI25 452 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 TRIM49CP0CI26 452 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 SMIM10L2AP0DMW4 78 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 SMIM10L2BP0DMW5 78 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 TGFB3P10600 412 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 ATF7P17544 494 aaPredicted RBP6.1□□□□□ -1.43
VPS33B-203ENST00000554264 CHRNB2P17787 502 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 GNAZP19086 355 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 PI3P19957 117 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 GRK2P25098 689 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 AVPR2P30518 371 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 PCK1P35558 622 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 GRK3P35626 688 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 VHLP40337 213 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 MAGEA4P43358 317 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 SLCO1A2P46721 670 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 QARSP47897 775 aaKnown RBP6.1□□□□□ -1.43
VPS33B-203ENST00000554264 LIMS1P48059 325 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 RPL26P61254 145 aaKnown RBP6.1□□□□□ -1.43
VPS33B-203ENST00000554264 GABREP78334 506 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 IRX4P78413 519 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 KLF1Q13351 362 aaPredicted RBP6.1□□□□□ -1.43
VPS33B-203ENST00000554264 DYNC1I2Q13409 638 aaKnown RBP6.1□□□□□ -1.43
VPS33B-203ENST00000554264 BTG3Q14201 252 aaPredicted RBP6.1□□□□□ -1.43
VPS33B-203ENST00000554264 KPNB1Q14974 876 aaKnown RBP6.1□□□□□ -1.43
VPS33B-203ENST00000554264 KRT72Q14CN4 511 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 PDCD2Q16342 344 aaPredicted RBP6.1□□□□□ -1.43
VPS33B-203ENST00000554264 KIZQ2M2Z5 673 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 HSDL1Q3SXM5 330 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 EMC4Q5J8M3 183 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 HHATQ5VTY9 493 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 DAB2IPQ5VWQ8 1189 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 IZUMO3Q5VZ72 239 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 SLC30A9Q6PML9 568 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 C4orf22Q6V702 233 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 MAMDC2Q7Z304 686 aaPredicted RBP6.1□□□□□ -1.43
VPS33B-203ENST00000554264 MIER3Q7Z3K6 550 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 CHSY1Q86X52 802 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 FAM129CQ86XR2 697 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 ECHDC2Q86YB7 292 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 PHF13Q86YI8 300 aaPredicted RBP6.1□□□□□ -1.43
VPS33B-203ENST00000554264 C4orf19Q8IY42 314 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 PPM1KQ8N3J5 372 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 FAM26EQ8N5C1 309 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 EFHBQ8N7U6 833 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 ATP11CQ8NB49 1132 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 GSTCDQ8NEC7 633 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 PCDH19Q8TAB3 1148 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 DENND1AQ8TEH3 1009 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 DNAJC9Q8WXX5 260 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 MAML1Q92585 1016 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 THOC1Q96FV9 657 aaKnown RBP6.1□□□□□ -1.43
VPS33B-203ENST00000554264 ZNF570Q96NI8 536 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 CLUHP3Q96NS8 147 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 NR1H4Q96RI1 486 aaPredicted RBP6.1□□□□□ -1.43
VPS33B-203ENST00000554264 NUDCD1Q96RS6 583 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 RBM15Q96T37 977 aaKnown RBP eCLIP6.1□□□□□ -1.43
VPS33B-203ENST00000554264 PDCD2LQ9BRP1 358 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 LXNQ9BS40 222 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 PHF7Q9BWX1 381 aaPredicted RBP6.1□□□□□ -1.43
VPS33B-203ENST00000554264 ZNF518BQ9C0D4 1074 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 TMEM117Q9H0C3 514 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 RNPEPQ9H4A4 650 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 EPB41L1Q9H4G0 881 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 TRABDQ9H4I3 376 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 FAM96AQ9H5X1 160 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 PCDH9Q9HC56 1237 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 RAB20Q9NX57 234 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 IL1RAPL1Q9NZN1 696 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 COL20A1Q9P218 1284 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 PDP2Q9P2J9 529 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 ZNF212Q9UDV6 495 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 IP6K2Q9UHH9 426 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 ANAPC7Q9UJX3 599 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 ANGPTL2Q9UKU9 493 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 PHTF1Q9UMS5 762 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 SORCS3Q9UPU3 1222 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 NAALADL1Q9UQQ1 740 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 COA3Q9Y2R0 106 aaPredicted RBP6.1□□□□□ -1.43
VPS33B-203ENST00000554264 NEU2Q9Y3R4 380 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 TECTAO75443 2155 aa6.1□□□□□ -1.43
VPS33B-203ENST00000554264 RALGAPA2Q2PPJ7 1873 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 CLUHO75153 1309 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 IQANK1A0A1B0GTG1 560 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms