RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 LRRC8BQ6P9F7 803 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 PARM1Q6UWI2 310 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 MTERF4Q7Z6M4 381 aaKnown RBP13.97□□□□□ -0.17
APEX1-205ENST00000553555 KIAA0907Q7Z7F0 614 aaPredicted RBP13.97□□□□□ -0.17
APEX1-205ENST00000553555 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.97□□□□□ -0.17
APEX1-205ENST00000553555 NAT16Q8N8M0 369 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 ARRDC2Q8TBH0 407 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 UBLCP1Q8WVY7 318 aaPredicted RBP13.97□□□□□ -0.17
APEX1-205ENST00000553555 ATP2A3Q93084 1043 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 CINPQ9BW66 212 aaPredicted RBP13.97□□□□□ -0.17
APEX1-205ENST00000553555 EPB41L4BQ9H329 900 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 PABPC3Q9H361 631 aaKnown RBP13.97□□□□□ -0.17
APEX1-205ENST00000553555 EBF3Q9H4W6 596 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 VIPAS39Q9H9C1 493 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 XAB2Q9HCS7 855 aaKnown RBP13.97□□□□□ -0.17
APEX1-205ENST00000553555 HAUS2Q9NVX0 235 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 GOLGA6AQ9NYA3 693 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 UBP1Q9NZI7 540 aa13.97□□□□□ -0.17
APEX1-205ENST00000553555 CXorf51AA0A1B0GTR3 108 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 H3BQ06 376 aaPredicted RBP13.96□□□□□ -0.17
APEX1-205ENST00000553555 BANF1O75531 89 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 MMP2P08253 660 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 CISD3P0C7P0 127 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 PSMC3P17980 439 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 MAGEA3P43357 314 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 DSC2Q02487 901 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 SLC20A2Q08357 652 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 DMC1Q14565 340 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 KYNUQ16719 465 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 BBS9Q3SYG4 887 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 ALG1LQ6GMV1 187 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 RETSATQ6NUM9 610 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 LINGO4Q6UY18 593 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 PRPF39Q86UA1 669 aaKnown RBP13.96□□□□□ -0.17
APEX1-205ENST00000553555 YAF2Q8IY57 180 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 ZBED8Q8IZ13 594 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 IQCKQ8N0W5 287 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.96□□□□□ -0.17
APEX1-205ENST00000553555 FGF14Q92915 247 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 TADA1Q96BN2 335 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 C9orf72Q96LT7 481 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 XPO6Q96QU8 1125 aaKnown RBP13.96□□□□□ -0.17
APEX1-205ENST00000553555 KXD1Q9BQD3 176 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 MGME1Q9BQP7 344 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 POLR1EQ9GZS1 481 aaKnown RBP13.96□□□□□ -0.17
APEX1-205ENST00000553555 ECT2Q9H8V3 914 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 LRRC40Q9H9A6 602 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 HPS4Q9NQG7 708 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 NINJ2Q9NZG7 142 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 EPS15L1Q9UBC2 864 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 GGA2Q9UJY4 613 aa13.96□□□□□ -0.17
APEX1-205ENST00000553555 MYO10Q9HD67 2058 aa13.96□□□□□ -0.18
APEX1-205ENST00000553555 KIAA1549LQ6ZVL6 1849 aa13.95□□□□□ -0.18
APEX1-205ENST00000553555 TTC24A2A3L6 582 aaPredicted RBP13.95□□□□□ -0.18
APEX1-205ENST00000553555 GRXCR2A6NFK2 248 aa13.95□□□□□ -0.18
APEX1-205ENST00000553555 ECI2O75521 394 aa13.95□□□□□ -0.18
APEX1-205ENST00000553555 TMCC1O94876 653 aa13.95□□□□□ -0.18
APEX1-205ENST00000553555 TTC4O95801 387 aa13.95□□□□□ -0.18
APEX1-205ENST00000553555 MT-CO1P00395 513 aa13.95□□□□□ -0.18
APEX1-205ENST00000553555 PABPC1P11940 636 aaKnown RBP13.95□□□□□ -0.18
APEX1-205ENST00000553555 GEMIN4P57678 1058 aaKnown RBP13.95□□□□□ -0.18
APEX1-205ENST00000553555 MPP3Q13368 585 aa13.95□□□□□ -0.18
APEX1-205ENST00000553555 OLIG2Q13516 323 aa13.95□□□□□ -0.18
APEX1-205ENST00000553555 IHHQ14623 411 aa13.95□□□□□ -0.18
APEX1-205ENST00000553555 FASTKD3Q14CZ7 662 aaKnown RBP13.95□□□□□ -0.18
APEX1-205ENST00000553555 FUT11Q495W5 492 aa13.95□□□□□ -0.18
APEX1-205ENST00000553555 HP1BP3Q5SSJ5 553 aaPredicted RBP13.95□□□□□ -0.18
APEX1-205ENST00000553555 CFAP58Q5T655 872 aa13.95□□□□□ -0.18
APEX1-205ENST00000553555 UBAP2Q5T6F2 1119 aaKnown RBP13.95□□□□□ -0.18
APEX1-205ENST00000553555 ALS2CLQ60I27 953 aa13.95□□□□□ -0.18
APEX1-205ENST00000553555 KDELC1Q6UW63 502 aa13.95□□□□□ -0.18
APEX1-205ENST00000553555 MYLIPQ8WY64 445 aa13.95□□□□□ -0.18
APEX1-205ENST00000553555 SIGLEC10Q96LC7 697 aa13.95□□□□□ -0.18
APEX1-205ENST00000553555 CDX2Q99626 313 aaPredicted RBP13.95□□□□□ -0.18
APEX1-205ENST00000553555 SEMA3CQ99985 751 aa13.95□□□□□ -0.18
APEX1-205ENST00000553555 CASS4Q9NQ75 786 aa13.95□□□□□ -0.18
APEX1-205ENST00000553555 VPS45Q9NRW7 570 aa13.95□□□□□ -0.18
APEX1-205ENST00000553555 MYLKQ15746 1914 aa13.94□□□□□ -0.18
APEX1-205ENST00000553555 OTOL1A6NHN0 477 aaPredicted RBP13.94□□□□□ -0.18
APEX1-205ENST00000553555 TRIM24O15164 1050 aa13.94□□□□□ -0.18
APEX1-205ENST00000553555 RIPK2O43353 540 aa13.94□□□□□ -0.18
APEX1-205ENST00000553555 CR2P20023 1033 aa13.94□□□□□ -0.18
APEX1-205ENST00000553555 CES1P23141 567 aa13.94□□□□□ -0.18
APEX1-205ENST00000553555 ADRA1AP35348 466 aa13.94□□□□□ -0.18
APEX1-205ENST00000553555 CD86P42081 329 aa13.94□□□□□ -0.18
APEX1-205ENST00000553555 RGRP47804 291 aa13.94□□□□□ -0.18
APEX1-205ENST00000553555 SKOR1P84550 965 aa13.94□□□□□ -0.18
APEX1-205ENST00000553555 NSUN2Q08J23 767 aaKnown RBP eCLIP13.94□□□□□ -0.18
APEX1-205ENST00000553555 MTM1Q13496 603 aa13.94□□□□□ -0.18
APEX1-205ENST00000553555 GRM2Q14416 872 aa13.94□□□□□ -0.18
APEX1-205ENST00000553555 SLC29A2Q14542 456 aa13.94□□□□□ -0.18
APEX1-205ENST00000553555 CCDC85BQ15834 202 aaPredicted RBP13.94□□□□□ -0.18
APEX1-205ENST00000553555 GAB4Q2WGN9 574 aa13.94□□□□□ -0.18
APEX1-205ENST00000553555 DNAJC21Q5F1R6 531 aaKnown RBP13.94□□□□□ -0.18
APEX1-205ENST00000553555 NAPEPLDQ6IQ20 393 aa13.94□□□□□ -0.18
APEX1-205ENST00000553555 MTSS1LQ765P7 747 aa13.94□□□□□ -0.18
APEX1-205ENST00000553555 LINC00523Q86TU6 105 aa13.94□□□□□ -0.18
APEX1-205ENST00000553555 ADIPOR2Q86V24 386 aa13.94□□□□□ -0.18
APEX1-205ENST00000553555 ANKMY2Q8IV38 441 aa13.94□□□□□ -0.18
APEX1-205ENST00000553555 ETFBKMTQ8IXQ9 262 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms