RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 POMGNT1Q8WZA1 660 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 IP6K1Q92551 441 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 SMARCE1Q969G3 411 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 REPS1Q96D71 796 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 CMTM3Q96MX0 182 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 AGAP2Q99490 1192 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 PRRX2Q99811 253 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 MXD3Q9BW11 206 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 STRA6Q9BX79 667 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 SMARCAD1Q9H4L7 1026 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 KAT14Q9H8E8 782 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 ENTPD7Q9NQZ7 604 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 SNTG1Q9NSN8 517 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 ARL8BQ9NVJ2 186 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 NCKIPSDQ9NZQ3 722 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 NFKBIL1Q9UBC1 381 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-209ENST00000553280 FBXO40Q9UH90 709 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 INTS6Q9UL03 887 aaKnown RBP5.36□□□□□ -1.55
SCFD1-209ENST00000553280 MAFFQ9ULX9 164 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 ICKQ9UPZ9 632 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 TNFSF13BQ9Y275 285 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 ADAM18Q9Y3Q7 739 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 CAPN7Q9Y6W3 813 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 FRMD3A2A2Y4 597 aa5.35□□□□□ -1.55
SCFD1-209ENST00000553280 RRHO14718 337 aa5.35□□□□□ -1.55
SCFD1-209ENST00000553280 FOXN1O15353 648 aa5.35□□□□□ -1.55
SCFD1-209ENST00000553280 PAGE4O60829 102 aa5.35□□□□□ -1.55
SCFD1-209ENST00000553280 ERAL1O75616 437 aaKnown RBP5.35□□□□□ -1.55
SCFD1-209ENST00000553280 HNRNPCP07910 306 aaKnown RBP eCLIP5.35□□□□□ -1.55
SCFD1-209ENST00000553280 IL11P20809 199 aa5.35□□□□□ -1.55
SCFD1-209ENST00000553280 GARSP41250 739 aaKnown RBP5.35□□□□□ -1.55
SCFD1-209ENST00000553280 SOX10P56693 466 aa5.35□□□□□ -1.55
SCFD1-209ENST00000553280 SIM1P81133 766 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-209ENST00000553280 GOLGA8DPQ0D2H9 430 aa5.35□□□□□ -1.55
SCFD1-209ENST00000553280 DPCR1Q3MIW9 517 aa5.35□□□□□ -1.55
SCFD1-209ENST00000553280 C5orf22Q49AR2 442 aa5.35□□□□□ -1.55
SCFD1-209ENST00000553280 ARL13AQ5H913 290 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-209ENST00000553280 CC2D1BQ5T0F9 858 aaKnown RBP5.35□□□□□ -1.55
SCFD1-209ENST00000553280 TMEM268Q5VZI3 342 aa5.35□□□□□ -1.55
SCFD1-209ENST00000553280 SARM1Q6SZW1 724 aa5.35□□□□□ -1.55
SCFD1-209ENST00000553280 ANKRD23Q86SG2 305 aa5.35□□□□□ -1.55
SCFD1-209ENST00000553280 PRPF39Q86UA1 669 aaKnown RBP5.35□□□□□ -1.55
SCFD1-209ENST00000553280 FAM160B2Q86V87 743 aa5.35□□□□□ -1.55
SCFD1-209ENST00000553280 UEVLDQ8IX04 471 aa5.35□□□□□ -1.55
SCFD1-209ENST00000553280 C16orf71Q8IYS4 520 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-209ENST00000553280 FAM9BQ8IZU0 186 aa5.35□□□□□ -1.55
SCFD1-209ENST00000553280 FAM47BQ8NA70 645 aa5.35□□□□□ -1.55
SCFD1-209ENST00000553280 UBE2Q2Q8WVN8 375 aa5.35□□□□□ -1.55
SCFD1-209ENST00000553280 ZFPM2Q8WW38 1151 aa5.35□□□□□ -1.55
SCFD1-209ENST00000553280 TEFMQ96QE5 360 aaKnown RBP5.35□□□□□ -1.55
SCFD1-209ENST00000553280 FRG2BQ96QU4 278 aa5.35□□□□□ -1.55
SCFD1-209ENST00000553280 YME1L1Q96TA2 773 aa5.35□□□□□ -1.55
SCFD1-209ENST00000553280 GLIS2Q9BZE0 524 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-209ENST00000553280 SCPEP1Q9HB40 452 aa5.35□□□□□ -1.55
SCFD1-209ENST00000553280 GRHL1Q9NZI5 618 aa5.35□□□□□ -1.55
SCFD1-209ENST00000553280 FBXO4Q9UKT5 387 aa5.35□□□□□ -1.55
SCFD1-209ENST00000553280 A4GNTQ9UNA3 340 aa5.35□□□□□ -1.55
SCFD1-209ENST00000553280 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.35□□□□□ -1.55
SCFD1-209ENST00000553280 TARSL2A2RTX5 802 aaKnown RBP5.34□□□□□ -1.55
SCFD1-209ENST00000553280 GRID2IPA4D2P6 1211 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 TMEM191CA6NGB0 347 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 TTC36A6NLP5 189 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 LRRC53A6NM62 1247 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 POC1B-GALNT4F8VUJ3 575 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 CCER2I3L3R5 266 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 LIASO43766 372 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 HNRNPCL1O60812 293 aaKnown RBP5.34□□□□□ -1.55
SCFD1-209ENST00000553280 DKC1O60832 514 aaKnown RBP eCLIP5.34□□□□□ -1.55
SCFD1-209ENST00000553280 SEC31AO94979 1220 aaKnown RBP5.34□□□□□ -1.55
SCFD1-209ENST00000553280 OR2C1O95371 312 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 CBX6O95503 412 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 HEXAP06865 529 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 TTKP33981 857 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 UBA7P41226 1012 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 EFNA5P52803 228 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 SNX16P57768 344 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 NIPAL4Q0D2K0 466 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 TAF11Q15544 211 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 EDRF1Q3B7T1 1238 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 KRTAP15-1Q3LI76 137 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 AWAT1Q58HT5 328 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 SERTAD4-AS1Q5TG53 156 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 FAM171A1Q5VUB5 890 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 ARMC3Q5W041 872 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 TXNDC8Q6A555 127 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 TMEM154Q6P9G4 183 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 PCSK4Q6UW60 755 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 MOB3CQ70IA8 216 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 ARHGAP12Q8IWW6 846 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 C17orf53Q8N3J3 647 aaPredicted RBP5.34□□□□□ -1.55
SCFD1-209ENST00000553280 TMEM217Q8N7C4 229 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 CAGE1Q8TC20 777 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 WDFY2Q96P53 400 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 TIMP4Q99727 224 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 H2AFJQ9BTM1 129 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 AP1M1Q9BXS5 423 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 FRMD8Q9BZ67 464 aaPredicted RBP5.34□□□□□ -1.55
SCFD1-209ENST00000553280 TXLNGYQ9BZA5 131 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 POLR1BQ9H9Y6 1135 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 FBRSL1Q9HCM7 1045 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms