RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 THOP1P52888 689 aa12.72□□□□□ -0.37
SNRPF-204ENST00000552085 COPB1P53618 953 aaKnown RBP12.72□□□□□ -0.37
SNRPF-204ENST00000552085 AP3M2P53677 418 aa12.72□□□□□ -0.37
SNRPF-204ENST00000552085 SNRPFP62306 86 aaKnown RBP12.72□□□□□ -0.37
SNRPF-204ENST00000552085 PTK2BQ14289 1009 aa12.72□□□□□ -0.37
SNRPF-204ENST00000552085 DLG2Q15700 870 aa12.72□□□□□ -0.37
SNRPF-204ENST00000552085 ZXDCQ2QGD7 858 aaPredicted RBP12.72□□□□□ -0.37
SNRPF-204ENST00000552085 DCAF6Q58WW2 860 aa12.72□□□□□ -0.37
SNRPF-204ENST00000552085 MS4A13Q5J8X5 152 aa12.72□□□□□ -0.37
SNRPF-204ENST00000552085 ATP1A1-AS1Q5TC04 95 aa12.72□□□□□ -0.37
SNRPF-204ENST00000552085 CCDC73Q6ZRK6 1079 aa12.72□□□□□ -0.37
SNRPF-204ENST00000552085 ERN2Q76MJ5 926 aaKnown RBP12.72□□□□□ -0.37
SNRPF-204ENST00000552085 CCDC65Q8IXS2 484 aa12.72□□□□□ -0.37
SNRPF-204ENST00000552085 PLEKHO2Q8TD55 490 aa12.72□□□□□ -0.37
SNRPF-204ENST00000552085 TAF4BQ92750 862 aa12.72□□□□□ -0.37
SNRPF-204ENST00000552085 C5orf34Q96MH7 638 aa12.72□□□□□ -0.37
SNRPF-204ENST00000552085 LENG8Q96PV6 779 aaPredicted RBP12.72□□□□□ -0.37
SNRPF-204ENST00000552085 KLF6Q99612 283 aaPredicted RBP12.72□□□□□ -0.37
SNRPF-204ENST00000552085 NUCKS1Q9H1E3 243 aaKnown RBP12.72□□□□□ -0.37
SNRPF-204ENST00000552085 AGPAT3Q9NRZ7 376 aa12.72□□□□□ -0.37
SNRPF-204ENST00000552085 ABCC13Q9NSE7 274 aa12.72□□□□□ -0.37
SNRPF-204ENST00000552085 GPR34Q9UPC5 381 aa12.72□□□□□ -0.37
SNRPF-204ENST00000552085 ENTPD4Q9Y227 616 aa12.72□□□□□ -0.37
SNRPF-204ENST00000552085 SLC5A6Q9Y289 635 aa12.72□□□□□ -0.37
SNRPF-204ENST00000552085 B3GALT1Q9Y5Z6 326 aa12.72□□□□□ -0.37
SNRPF-204ENST00000552085 YJEFN3A6XGL0 299 aa12.71□□□□□ -0.37
SNRPF-204ENST00000552085 E7ENQ6 273 aa12.71□□□□□ -0.37
SNRPF-204ENST00000552085 HGSO14964 777 aaPredicted RBP12.71□□□□□ -0.37
SNRPF-204ENST00000552085 CLIC2O15247 247 aa12.71□□□□□ -0.37
SNRPF-204ENST00000552085 DIAPH2O60879 1101 aa12.71□□□□□ -0.37
SNRPF-204ENST00000552085 ALPIP09923 528 aa12.71□□□□□ -0.37
SNRPF-204ENST00000552085 PDGFRAP16234 1089 aa12.71□□□□□ -0.37
SNRPF-204ENST00000552085 TCN2P20062 427 aa12.71□□□□□ -0.37
SNRPF-204ENST00000552085 PLK1P53350 603 aa12.71□□□□□ -0.37
SNRPF-204ENST00000552085 ELOCQ15369 112 aa12.71□□□□□ -0.37
SNRPF-204ENST00000552085 ARHGAP44Q17R89 818 aa12.71□□□□□ -0.37
SNRPF-204ENST00000552085 CRTC2Q53ET0 693 aaPredicted RBP12.71□□□□□ -0.37
SNRPF-204ENST00000552085 SPOPLQ6IQ16 392 aa12.71□□□□□ -0.37
SNRPF-204ENST00000552085 MSANTD2Q6P1R3 559 aa12.71□□□□□ -0.37
SNRPF-204ENST00000552085 C16orf46Q6P387 395 aa12.71□□□□□ -0.37
SNRPF-204ENST00000552085 SPRED1Q7Z699 444 aa12.71□□□□□ -0.37
SNRPF-204ENST00000552085 MCEMP1Q8IX19 187 aa12.71□□□□□ -0.37
SNRPF-204ENST00000552085 RNF34Q969K3 372 aa12.71□□□□□ -0.37
SNRPF-204ENST00000552085 FEM1CQ96JP0 617 aa12.71□□□□□ -0.37
SNRPF-204ENST00000552085 DDA1Q9BW61 102 aa12.71□□□□□ -0.37
SNRPF-204ENST00000552085 SLC29A3Q9BZD2 475 aa12.71□□□□□ -0.37
SNRPF-204ENST00000552085 DNAI2Q9GZS0 605 aa12.71□□□□□ -0.37
SNRPF-204ENST00000552085 SLC25A13Q9UJS0 675 aa12.71□□□□□ -0.37
SNRPF-204ENST00000552085 ITGB1BP2Q9UKP3 347 aa12.71□□□□□ -0.37
SNRPF-204ENST00000552085 SRPRBQ9Y5M8 271 aaKnown RBP12.71□□□□□ -0.37
SNRPF-204ENST00000552085 CROCCQ5TZA2 2017 aa12.71□□□□□ -0.38
SNRPF-204ENST00000552085 LOC101059948A0A1B0GTJ6 334 aa12.7□□□□□ -0.38
SNRPF-204ENST00000552085 EIF3DO15371 548 aaKnown RBP eCLIP12.7□□□□□ -0.388e-8■■□□□ 12
SNRPF-204ENST00000552085 TGFB1I1O43294 461 aa12.7□□□□□ -0.38
SNRPF-204ENST00000552085 ASS1P00966 412 aaKnown RBP12.7□□□□□ -0.38
SNRPF-204ENST00000552085 PDGFAP04085 211 aa12.7□□□□□ -0.38
SNRPF-204ENST00000552085 RPN1P04843 607 aaKnown RBP12.7□□□□□ -0.38
SNRPF-204ENST00000552085 PNLIPP16233 465 aa12.7□□□□□ -0.38
SNRPF-204ENST00000552085 GLB1P16278 677 aa12.7□□□□□ -0.38
SNRPF-204ENST00000552085 CHRNA3P32297 505 aa12.7□□□□□ -0.38
SNRPF-204ENST00000552085 TBX4P57082 545 aa12.7□□□□□ -0.38
SNRPF-204ENST00000552085 PPARDQ03181 441 aa12.7□□□□□ -0.38
SNRPF-204ENST00000552085 SGCGQ13326 291 aa12.7□□□□□ -0.38
SNRPF-204ENST00000552085 MAP9Q49MG5 647 aa12.7□□□□□ -0.38
SNRPF-204ENST00000552085 TP53INP2Q8IXH6 220 aa12.7□□□□□ -0.38
SNRPF-204ENST00000552085 CCDC112Q8NEF3 446 aa12.7□□□□□ -0.38
SNRPF-204ENST00000552085 TMIEQ8NEW7 156 aa12.7□□□□□ -0.38
SNRPF-204ENST00000552085 ZNF507Q8TCN5 953 aa12.7□□□□□ -0.38
SNRPF-204ENST00000552085 STARD8Q92502 1023 aa12.7□□□□□ -0.38
SNRPF-204ENST00000552085 HDAC8Q9BY41 377 aa12.7□□□□□ -0.38
SNRPF-204ENST00000552085 FBXO2Q9UK22 296 aaPredicted RBP12.7□□□□□ -0.38
SNRPF-204ENST00000552085 CHD5Q8TDI0 1954 aa12.7□□□□□ -0.38
SNRPF-204ENST00000552085 LRRIQ3A6PVS8 624 aaPredicted RBP12.69□□□□□ -0.38
SNRPF-204ENST00000552085 RFPL1O75677 317 aa12.69□□□□□ -0.38
SNRPF-204ENST00000552085 SORBS2O94875 1100 aaKnown RBP12.69□□□□□ -0.38
SNRPF-204ENST00000552085 MAP4P27816 1152 aaKnown RBP12.69□□□□□ -0.38
SNRPF-204ENST00000552085 LEPRP48357 1165 aaKnown RBP12.69□□□□□ -0.38
SNRPF-204ENST00000552085 SLC8A3P57103 927 aa12.69□□□□□ -0.38
SNRPF-204ENST00000552085 CLDN10P78369 228 aa12.69□□□□□ -0.38
SNRPF-204ENST00000552085 INPP5JQ15735 1006 aaPredicted RBP12.69□□□□□ -0.38
SNRPF-204ENST00000552085 CERCAMQ5T4B2 595 aa12.69□□□□□ -0.38
SNRPF-204ENST00000552085 EPM2AIP1Q7L775 607 aaPredicted RBP12.69□□□□□ -0.38
SNRPF-204ENST00000552085 PIM3Q86V86 326 aa12.69□□□□□ -0.38
SNRPF-204ENST00000552085 ZSCAN30Q86W11 494 aa12.69□□□□□ -0.38
SNRPF-204ENST00000552085 UNC5BQ8IZJ1 945 aa12.69□□□□□ -0.38
SNRPF-204ENST00000552085 LGI2Q8N0V4 545 aa12.69□□□□□ -0.38
SNRPF-204ENST00000552085 NLGN4XQ8N0W4 816 aa12.69□□□□□ -0.38
SNRPF-204ENST00000552085 RCBTB1Q8NDN9 531 aa12.69□□□□□ -0.38
SNRPF-204ENST00000552085 DENND6BQ8NEG7 585 aa12.69□□□□□ -0.38
SNRPF-204ENST00000552085 GPR156Q8NFN8 814 aa12.69□□□□□ -0.38
SNRPF-204ENST00000552085 NLGN4YQ8NFZ3 816 aaPredicted RBP12.69□□□□□ -0.38
SNRPF-204ENST00000552085 PARD3BQ8TEW8 1205 aa12.69□□□□□ -0.38
SNRPF-204ENST00000552085 ART4Q93070 314 aa12.69□□□□□ -0.38
SNRPF-204ENST00000552085 IPO9Q96P70 1041 aaKnown RBP12.69□□□□□ -0.38
SNRPF-204ENST00000552085 C1QTNF2Q9BXJ5 285 aa12.69□□□□□ -0.38
SNRPF-204ENST00000552085 ASPSCR1Q9BZE9 553 aa12.69□□□□□ -0.38
SNRPF-204ENST00000552085 EDEM3Q9BZQ6 932 aa12.69□□□□□ -0.38
SNRPF-204ENST00000552085 LRRC27Q9C0I9 530 aa12.69□□□□□ -0.38
SNRPF-204ENST00000552085 CYP3A43Q9HB55 503 aa12.69□□□□□ -0.38
SNRPF-204ENST00000552085 LRRC4Q9HBW1 653 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms