RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 GFRA3O60609 400 aa16.63■□□□□ 0.25
GCN1-209ENST00000551920 LEFTY1O75610 366 aa16.63■□□□□ 0.25
GCN1-209ENST00000551920 GJB3O75712 270 aa16.63■□□□□ 0.25
GCN1-209ENST00000551920 RNASEH2AO75792 299 aaKnown RBP16.63■□□□□ 0.25
GCN1-209ENST00000551920 FTCDO95954 541 aa16.63■□□□□ 0.25
GCN1-209ENST00000551920 C5AR1P21730 350 aa16.63■□□□□ 0.25
GCN1-209ENST00000551920 IL10RBQ08334 325 aa16.63■□□□□ 0.25
GCN1-209ENST00000551920 ADCY2Q08462 1091 aa16.63■□□□□ 0.25
GCN1-209ENST00000551920 BYSLQ13895 437 aaKnown RBP16.63■□□□□ 0.25
GCN1-209ENST00000551920 GSE1Q14687 1217 aa16.63■□□□□ 0.25
GCN1-209ENST00000551920 ELF2Q15723 593 aa16.63■□□□□ 0.25
GCN1-209ENST00000551920 ARSIQ5FYB1 569 aa16.63■□□□□ 0.25
GCN1-209ENST00000551920 SPOCD1Q6ZMY3 1216 aa16.63■□□□□ 0.25
GCN1-209ENST00000551920 USP30Q70CQ3 517 aa16.63■□□□□ 0.25
GCN1-209ENST00000551920 DSG4Q86SJ6 1040 aa16.63■□□□□ 0.25
GCN1-209ENST00000551920 C11orf74Q86VG3 221 aa16.63■□□□□ 0.25
GCN1-209ENST00000551920 DCLK2Q8N568 766 aa16.63■□□□□ 0.25
GCN1-209ENST00000551920 ATPAF2Q8N5M1 289 aa16.63■□□□□ 0.25
GCN1-209ENST00000551920 OR2AP1Q8NGE2 309 aa16.63■□□□□ 0.25
GCN1-209ENST00000551920 KIAA1524Q8TCG1 905 aa16.63■□□□□ 0.25
GCN1-209ENST00000551920 CASKIN2Q8WXE0 1202 aa16.63■□□□□ 0.25
GCN1-209ENST00000551920 ARRDC3Q96B67 414 aa16.63■□□□□ 0.25
GCN1-209ENST00000551920 CCDC114Q96M63 670 aa16.63■□□□□ 0.25
GCN1-209ENST00000551920 HERPUD2Q9BSE4 406 aa16.63■□□□□ 0.25
GCN1-209ENST00000551920 GPR174Q9BXC1 333 aa16.63■□□□□ 0.25
GCN1-209ENST00000551920 HECAQ9UBI9 543 aaPredicted RBP16.63■□□□□ 0.25
GCN1-209ENST00000551920 IL36AQ9UHA7 158 aa16.63■□□□□ 0.25
GCN1-209ENST00000551920 SCML1Q9UN30 329 aa16.63■□□□□ 0.25
GCN1-209ENST00000551920 GVINP1Q7Z2Y8 2422 aa16.62■□□□□ 0.25
GCN1-209ENST00000551920 LAMA1P25391 3075 aa16.62■□□□□ 0.25
GCN1-209ENST00000551920 C10orf142B7Z368 130 aa16.62■□□□□ 0.25
GCN1-209ENST00000551920 EPN2O95208 641 aa16.62■□□□□ 0.25
GCN1-209ENST00000551920 CCDC175P0C221 793 aa16.62■□□□□ 0.25
GCN1-209ENST00000551920 KRT10P13645 584 aa16.62■□□□□ 0.25
GCN1-209ENST00000551920 CTNNA2P26232 953 aa16.62■□□□□ 0.25
GCN1-209ENST00000551920 GARSP41250 739 aaKnown RBP16.62■□□□□ 0.25
GCN1-209ENST00000551920 RECQLP46063 649 aaPredicted RBP16.62■□□□□ 0.25
GCN1-209ENST00000551920 RHOAP61586 193 aa16.62■□□□□ 0.25
GCN1-209ENST00000551920 SLC10A7Q0GE19 358 aa16.62■□□□□ 0.25
GCN1-209ENST00000551920 CNTN1Q12860 1018 aa16.62■□□□□ 0.25
GCN1-209ENST00000551920 TMCO4Q5TGY1 634 aa16.62■□□□□ 0.25
GCN1-209ENST00000551920 AGBL4Q5VU57 503 aa16.62■□□□□ 0.25
GCN1-209ENST00000551920 NPNTQ6UXI9 565 aa16.62■□□□□ 0.25
GCN1-209ENST00000551920 SLC36A4Q6YBV0 504 aa16.62■□□□□ 0.25
GCN1-209ENST00000551920 LPCAT2Q7L5N7 544 aa16.62■□□□□ 0.25
GCN1-209ENST00000551920 PLPP6Q8IY26 295 aa16.62■□□□□ 0.25
GCN1-209ENST00000551920 TXLNBQ8N3L3 684 aa16.62■□□□□ 0.25
GCN1-209ENST00000551920 HDDC3Q8N4P3 179 aa16.62■□□□□ 0.25
GCN1-209ENST00000551920 TSEN2Q8NCE0 465 aaKnown RBP16.62■□□□□ 0.25
GCN1-209ENST00000551920 HSPA12BQ96MM6 686 aa16.62■□□□□ 0.25
GCN1-209ENST00000551920 GDAP1L1Q96MZ0 367 aa16.62■□□□□ 0.25
GCN1-209ENST00000551920 HEPHQ9BQS7 1158 aa16.62■□□□□ 0.25
GCN1-209ENST00000551920 TSGA10Q9BZW7 698 aa16.62■□□□□ 0.25
GCN1-209ENST00000551920 NEUROG2Q9H2A3 272 aa16.62■□□□□ 0.25
GCN1-209ENST00000551920 ZDHHC6Q9H6R6 413 aa16.62■□□□□ 0.25
GCN1-209ENST00000551920 RAB23Q9ULC3 237 aa16.62■□□□□ 0.25
GCN1-209ENST00000551920 PACSIN2Q9UNF0 486 aaPredicted RBP16.62■□□□□ 0.25
GCN1-209ENST00000551920 PCDHA3Q9Y5H8 950 aa16.62■□□□□ 0.25
GCN1-209ENST00000551920 ABCA7Q8IZY2 2146 aa16.61■□□□□ 0.25
GCN1-209ENST00000551920 hCG_1818297A0A087WSY0 165 aa16.61■□□□□ 0.25
GCN1-209ENST00000551920 C1QTNF3-AMACRE9PGA6 284 aa16.61■□□□□ 0.25
GCN1-209ENST00000551920 KPNA3O00505 521 aaPredicted RBP16.61■□□□□ 0.25
GCN1-209ENST00000551920 APOL1O14791 398 aa16.61■□□□□ 0.25
GCN1-209ENST00000551920 INSIG1O15503 277 aa16.61■□□□□ 0.25
GCN1-209ENST00000551920 MAP3K13O43283 966 aa16.61■□□□□ 0.25
GCN1-209ENST00000551920 PRNPP04156 253 aa16.61■□□□□ 0.25
GCN1-209ENST00000551920 OXTRP30559 389 aa16.61■□□□□ 0.25
GCN1-209ENST00000551920 PEX5P50542 639 aa16.61■□□□□ 0.25
GCN1-209ENST00000551920 ADPRHP54922 357 aa16.61■□□□□ 0.25
GCN1-209ENST00000551920 DYNLT1P63172 113 aa16.61■□□□□ 0.25
GCN1-209ENST00000551920 PIP5KL1Q5T9C9 394 aa16.61■□□□□ 0.25
GCN1-209ENST00000551920 ZNF662Q6ZS27 426 aa16.61■□□□□ 0.25
GCN1-209ENST00000551920 RFX6Q8HWS3 928 aa16.61■□□□□ 0.25
GCN1-209ENST00000551920 PGBD5Q8N414 524 aa16.61■□□□□ 0.25
GCN1-209ENST00000551920 RYBPQ8N488 228 aaPredicted RBP16.61■□□□□ 0.25
GCN1-209ENST00000551920 TMIEQ8NEW7 156 aa16.61■□□□□ 0.25
GCN1-209ENST00000551920 EXD1Q8NHP7 514 aa16.61■□□□□ 0.25
GCN1-209ENST00000551920 GANCQ8TET4 914 aa16.61■□□□□ 0.25
GCN1-209ENST00000551920 LOXL4Q96JB6 756 aa16.61■□□□□ 0.25
GCN1-209ENST00000551920 NSMCE3Q96MG7 304 aa16.61■□□□□ 0.25
GCN1-209ENST00000551920 ZNF830Q96NB3 372 aaPredicted RBP16.61■□□□□ 0.25
GCN1-209ENST00000551920 ZNF599Q96NL3 588 aa16.61■□□□□ 0.25
GCN1-209ENST00000551920 OLFM3Q96PB7 478 aa16.61■□□□□ 0.25
GCN1-209ENST00000551920 C6orf106Q9H6K1 298 aaPredicted RBP16.61■□□□□ 0.25
GCN1-209ENST00000551920 EVLQ9UI08 416 aaPredicted RBP16.61■□□□□ 0.25
GCN1-209ENST00000551920 FZD4Q9ULV1 537 aa16.61■□□□□ 0.25
GCN1-209ENST00000551920 GUCA1BQ9UMX6 200 aa16.61■□□□□ 0.25
GCN1-209ENST00000551920 PPP2R2CQ9Y2T4 447 aa16.61■□□□□ 0.25
GCN1-209ENST00000551920 NUP205Q92621 2012 aa16.61■□□□□ 0.25
GCN1-209ENST00000551920 EP300Q09472 2414 aaPredicted RBP16.61■□□□□ 0.25
GCN1-209ENST00000551920 ATXN2Q99700 1313 aaKnown RBP16.61■□□□□ 0.25
GCN1-209ENST00000551920 TNRC6BQ9UPQ9 1833 aaKnown RBP16.61■□□□□ 0.25
GCN1-209ENST00000551920 NUMA1Q14980 2115 aa16.6■□□□□ 0.25
GCN1-209ENST00000551920 CFAP54Q96N23 3096 aa16.6■□□□□ 0.25
GCN1-209ENST00000551920 SPAG17Q6Q759 2223 aa16.6■□□□□ 0.25
GCN1-209ENST00000551920 KRIT1O00522 736 aa16.6■□□□□ 0.25
GCN1-209ENST00000551920 RHOBTB1O94844 696 aa16.6■□□□□ 0.25
GCN1-209ENST00000551920 ZRANB2O95218 330 aaKnown RBP eCLIP16.6■□□□□ 0.254e-8■■■■□ 20.3
GCN1-209ENST00000551920 SEMA4FO95754 770 aa16.6■□□□□ 0.25
GCN1-209ENST00000551920 IGSF6O95976 241 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms