RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 QKIQ96PU8 341 aaKnown RBP eCLIP7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 TMEM121BQ9BXQ6 578 aaPredicted RBP7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 TKTL2Q9H0I9 626 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 CDC42EP4Q9H3Q1 356 aaKnown RBP7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 FBXO44Q9H4M3 255 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 WDCPQ9H6R7 721 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 NMUR1Q9HB89 426 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 TMBIM4Q9HC24 238 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 ETNK2Q9NVF9 386 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 DTLQ9NZJ0 730 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 EBF1Q9UH73 591 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 MBD1Q9UIS9 605 aaPredicted RBP7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 ZMYM5Q9UJ78 669 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 SLC8A2Q9UPR5 921 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 MFHAS1Q9Y4C4 1052 aa7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 FARP1Q9Y4F1 1045 aaPredicted RBP7.57□□□□□ -1.2
SMARCD1-210ENST00000551352 LNP1A1A4G5 178 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 GOLGA6CA6NDK9 693 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 ZNF840PA6NDX5 716 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 GOLGA6L10A6NI86 522 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 HACD1B0YJ81 288 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 FAM72CH0Y354 149 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 SMAPO00193 183 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 CDX4O14627 284 aaPredicted RBP7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 TRIM24O15164 1050 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 GREM1O60565 184 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 ADAM23O75077 832 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 RTN3O95197 1032 aaPredicted RBP7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 KCNK5O95279 499 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 TTC4O95801 387 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 SHBGP04278 402 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 MYZAPP0CAP1 466 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 GOLGA6DP0CG33 693 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 HDCP19113 662 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 YWHAQP27348 245 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 RBL1P28749 1068 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 IFNAR2P48551 515 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 TPI1P60174 286 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 SLC7A9P82251 487 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 IFFO1Q0D2I5 559 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 SLC29A2Q14542 456 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 ST3GAL2Q16842 350 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 KRT71Q3SY84 523 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 C2orf27AQ580R0 203 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 BRMS1LQ5PSV4 323 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 FAM72AQ5TYM5 149 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 ANKRD22Q5VYY1 191 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 FAM72DQ6L9T8 149 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 DENND5BQ6ZUT9 1274 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 BZW1Q7L1Q6 419 aaKnown RBP7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 FAM72BQ86X60 149 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 CCDC33Q8N5R6 958 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 CAMKK1Q8N5S9 505 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 NAT8LQ8N9F0 302 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 ATP2A3Q93084 1043 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 RNF34Q969K3 372 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 PKNOX2Q96KN3 472 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 ATP6V1G3Q96LB4 118 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 RBM15Q96T37 977 aaKnown RBP eCLIP7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 EPAS1Q99814 870 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 TMEM109Q9BVC6 243 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 PHACTR1Q9C0D0 580 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 OSBPL2Q9H1P3 480 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 CD248Q9HCU0 757 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 DNAJC17Q9NVM6 304 aaKnown RBP7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 TMEM51Q9NW97 253 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 COMMD8Q9NX08 183 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 OSER1Q9NX31 292 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 SMPD4Q9NXE4 827 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 ARHGEF38Q9NXL2 777 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 GOLGA6AQ9NYA3 693 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 CLIC5Q9NZA1 410 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 NINJ2Q9NZG7 142 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 GMIPQ9P107 970 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 PAK5Q9P286 719 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 UXTQ9UBK9 157 aaPredicted RBP7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 MMP17Q9ULZ9 603 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 RAD54BQ9Y620 910 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 CPQQ9Y646 472 aa7.56□□□□□ -1.2
SMARCD1-210ENST00000551352 PLXNA2O75051 1894 aa7.55□□□□□ -1.2
SMARCD1-210ENST00000551352 FREM2Q5SZK8 3169 aa7.55□□□□□ -1.2
SMARCD1-210ENST00000551352 SHROOM3Q8TF72 1996 aa7.55□□□□□ -1.2
SMARCD1-210ENST00000551352 FAM208BQ5VWN6 2430 aa7.55□□□□□ -1.2
SMARCD1-210ENST00000551352 C5orf60A6NFR6 353 aa7.55□□□□□ -1.2
SMARCD1-210ENST00000551352 HMGB1P1B2RPK0 211 aaPredicted RBP7.55□□□□□ -1.2
SMARCD1-210ENST00000551352 MSI1O43347 362 aaKnown RBP7.55□□□□□ -1.2
SMARCD1-210ENST00000551352 PAGE1O75459 146 aa7.55□□□□□ -1.2
SMARCD1-210ENST00000551352 GCATO75600 419 aa7.55□□□□□ -1.2
SMARCD1-210ENST00000551352 ZNF189O75820 626 aaPredicted RBP7.55□□□□□ -1.2
SMARCD1-210ENST00000551352 TMEM63AO94886 807 aa7.55□□□□□ -1.2
SMARCD1-210ENST00000551352 LRIG2O94898 1065 aa7.55□□□□□ -1.2
SMARCD1-210ENST00000551352 ACSL3O95573 720 aa7.55□□□□□ -1.2
SMARCD1-210ENST00000551352 APBB3O95704 486 aa7.55□□□□□ -1.2
SMARCD1-210ENST00000551352 ABHD2P08910 425 aa7.55□□□□□ -1.2
SMARCD1-210ENST00000551352 VAV1P15498 845 aa7.55□□□□□ -1.2
SMARCD1-210ENST00000551352 ERCC2P18074 760 aa7.55□□□□□ -1.2
SMARCD1-210ENST00000551352 SPINK2P20155 84 aa7.55□□□□□ -1.2
SMARCD1-210ENST00000551352 KCNA4P22459 653 aa7.55□□□□□ -1.2
SMARCD1-210ENST00000551352 CCR1P32246 355 aa7.55□□□□□ -1.2
SMARCD1-210ENST00000551352 ACTN2P35609 894 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms