RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 C8orf48Q96LL4 319 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 SYT11Q9BT88 431 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 DUSP16Q9BY84 665 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 B3GNT5Q9BYG0 378 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 RHOBTB2Q9BYZ6 727 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 ZDHHC5Q9C0B5 715 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 ZNF518BQ9C0D4 1074 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 OR10A5Q9H207 317 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 DPEP3Q9H4B8 488 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 PRDM12Q9H4Q4 367 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 TLE6Q9H808 572 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 CERS4Q9HA82 394 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 DMAP1Q9NPF5 467 aaPredicted RBP6.03□□□□□ -1.44
SCAF11-213ENST00000550629 COMMD8Q9NX08 183 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 ZDHHC7Q9NXF8 308 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 EHD2Q9NZN4 543 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 FBXW11Q9UKB1 542 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 ASB1Q9Y576 335 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 CEP83Q9Y592 693 aa6.03□□□□□ -1.44
SCAF11-213ENST00000550629 COL4A4P53420 1690 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-213ENST00000550629 WDR27A2RRH5 827 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 MTMR11A4FU01 709 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 PRRG1O14668 218 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 XPO1O14980 1071 aaKnown RBP6.02□□□□□ -1.45
SCAF11-213ENST00000550629 THAP12O43422 761 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 TGM5O43548 720 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 PNMA6AP0CW24 399 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-213ENST00000550629 HAPLN1P10915 354 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-213ENST00000550629 C6P13671 934 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 CCDC130P13994 396 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 RPL17P18621 184 aaKnown RBP6.02□□□□□ -1.45
SCAF11-213ENST00000550629 ELF1P32519 619 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 CDH5P33151 784 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-213ENST00000550629 ALDH1A3P47895 512 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 RPL34P49207 117 aaKnown RBP6.02□□□□□ -1.45
SCAF11-213ENST00000550629 KCNQ1P51787 676 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 ADKP55263 362 aaKnown RBP6.02□□□□□ -1.45
SCAF11-213ENST00000550629 ARPP19P56211 112 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 ADCY1Q08828 1119 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 BST2Q10589 180 aaKnown RBP6.02□□□□□ -1.45
SCAF11-213ENST00000550629 KCNC3Q14003 757 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 GOLGA7BQ2TAP0 167 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 CC2D1AQ6P1N0 951 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-213ENST00000550629 PAQR9Q6ZVX9 377 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 NOP9Q86U38 636 aaKnown RBP6.02□□□□□ -1.45
SCAF11-213ENST00000550629 TMTC1Q8IUR5 882 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 CCDC170Q8IYT3 715 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 EFHBQ8N7U6 833 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 CHST14Q8NCH0 376 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 TMEM35BQ8NCS4 154 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 MSANTD4Q8NCY6 345 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 CCDC112Q8NEF3 446 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 CMASQ8NFW8 434 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-213ENST00000550629 WDR48Q8TAF3 677 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 CASP10Q92851 521 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 LMF1Q96S06 567 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 PPP1R9BQ96SB3 815 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 AGPAT1Q99943 283 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 ZSWIM1Q9BR11 485 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 MIS12Q9H081 205 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 SEC61A2Q9H9S3 476 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 CD248Q9HCU0 757 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 FAM49BQ9NUQ9 324 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 TMLHEQ9NVH6 421 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 FBXO10Q9UK96 956 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 CDC42EP3Q9UKI2 254 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 TSPAN16Q9UKR8 245 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 ASB3Q9Y575 518 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 MTCH2Q9Y6C9 303 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 PLXNA4Q9HCM2 1894 aa6.02□□□□□ -1.45
SCAF11-213ENST00000550629 M0QYV0 167 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 DVL2O14641 736 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 HCRTO43612 131 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 RFPL3O75679 317 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 RTN3O95197 1032 aaPredicted RBP6.01□□□□□ -1.45
SCAF11-213ENST00000550629 VNN2O95498 520 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 FGF19O95750 216 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 OR4Q2P0C623 313 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 GZMAP12544 262 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 HOXB8P17481 243 aaPredicted RBP6.01□□□□□ -1.45
SCAF11-213ENST00000550629 CHRNB2P17787 502 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 TACR2P21452 398 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 MMP8P22894 467 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 BDNFP23560 247 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 CYP2F1P24903 491 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 ADORA2BP29275 332 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 CA8P35219 290 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 GDF5P43026 501 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 GPD2P43304 727 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 ACADSBP45954 432 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 NRIP1P48552 1158 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 CCDC173Q0VFZ6 552 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 VEPH1Q14D04 833 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 EIF4HQ15056 248 aaKnown RBP6.01□□□□□ -1.45
SCAF11-213ENST00000550629 RNF151Q2KHN1 245 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 TDRD12Q587J7 1177 aaKnown RBP6.01□□□□□ -1.45
SCAF11-213ENST00000550629 RAB41Q5JT25 222 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 C10orf76Q5T2E6 689 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 PIK3R6Q5UE93 754 aa6.01□□□□□ -1.45
SCAF11-213ENST00000550629 DENND1BQ6P3S1 775 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms