RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 CRYBG2Q8N1P7 616 aa15.24■□□□□ 0.03
PDE1B-207ENST00000550620 KDM1BQ8NB78 822 aa15.24■□□□□ 0.03
PDE1B-207ENST00000550620 ZSCAN18Q8TBC5 510 aaPredicted RBP15.24■□□□□ 0.03
PDE1B-207ENST00000550620 LRTOMTQ8WZ04 291 aa15.24■□□□□ 0.03
PDE1B-207ENST00000550620 ABTB1Q969K4 478 aaPredicted RBP15.24■□□□□ 0.03
PDE1B-207ENST00000550620 SEMA6AQ9H2E6 1030 aa15.24■□□□□ 0.03
PDE1B-207ENST00000550620 SNX25Q9H3E2 840 aa15.24■□□□□ 0.03
PDE1B-207ENST00000550620 CLK4Q9HAZ1 481 aaKnown RBP15.24■□□□□ 0.03
PDE1B-207ENST00000550620 SPAG4Q9NPE6 437 aa15.24■□□□□ 0.03
PDE1B-207ENST00000550620 ACSS2Q9NR19 701 aa15.24■□□□□ 0.03
PDE1B-207ENST00000550620 CHRAC1Q9NRG0 131 aa15.24■□□□□ 0.03
PDE1B-207ENST00000550620 SARDHQ9UL12 918 aa15.24■□□□□ 0.03
PDE1B-207ENST00000550620 SLC8A2Q9UPR5 921 aa15.24■□□□□ 0.03
PDE1B-207ENST00000550620 SYNJ2BP-COX16A0A087WUM0 186 aa15.23■□□□□ 0.03
PDE1B-207ENST00000550620 KCNU1A8MYU2 1149 aa15.23■□□□□ 0.03
PDE1B-207ENST00000550620 TARM1B6A8C7 271 aa15.23■□□□□ 0.03
PDE1B-207ENST00000550620 ZBTB24O43167 697 aaPredicted RBP15.23■□□□□ 0.03
PDE1B-207ENST00000550620 DLX3O60479 287 aa15.23■□□□□ 0.03
PDE1B-207ENST00000550620 JUNP05412 331 aaKnown RBP15.23■□□□□ 0.03
PDE1B-207ENST00000550620 SLC35E2BP0CK96 405 aa15.23■□□□□ 0.03
PDE1B-207ENST00000550620 INSRRP14616 1297 aa15.23■□□□□ 0.03
PDE1B-207ENST00000550620 YBX3P16989 372 aaKnown RBP eCLIP15.23■□□□□ 0.03
PDE1B-207ENST00000550620 SCNN1BP51168 640 aa15.23■□□□□ 0.03
PDE1B-207ENST00000550620 CDH17Q12864 832 aa15.23■□□□□ 0.03
PDE1B-207ENST00000550620 PPIL2Q13356 520 aa15.23■□□□□ 0.03
PDE1B-207ENST00000550620 SQLEQ14534 574 aa15.23■□□□□ 0.03
PDE1B-207ENST00000550620 PRPSAP1Q14558 356 aa15.23■□□□□ 0.03
PDE1B-207ENST00000550620 DGKDQ16760 1214 aa15.23■□□□□ 0.03
PDE1B-207ENST00000550620 IRAK1BP1Q5VVH5 260 aa15.23■□□□□ 0.03
PDE1B-207ENST00000550620 DHRS4L2Q6PKH6 230 aa15.23■□□□□ 0.03
PDE1B-207ENST00000550620 GK5Q6ZS86 529 aa15.23■□□□□ 0.03
PDE1B-207ENST00000550620 APOBEC3FQ8IUX4 373 aaKnown RBP15.23■□□□□ 0.03
PDE1B-207ENST00000550620 HERC6Q8IVU3 1022 aa15.23■□□□□ 0.03
PDE1B-207ENST00000550620 CCNYL1Q8N7R7 359 aa15.23■□□□□ 0.03
PDE1B-207ENST00000550620 UHRF1Q96T88 793 aaPredicted RBP15.23■□□□□ 0.03
PDE1B-207ENST00000550620 VAT1Q99536 393 aa15.23■□□□□ 0.03
PDE1B-207ENST00000550620 LPIN3Q9BQK8 851 aa15.23■□□□□ 0.03
PDE1B-207ENST00000550620 ANKRD60Q9BZ19 345 aa15.23■□□□□ 0.03
PDE1B-207ENST00000550620 VPS45Q9NRW7 570 aa15.23■□□□□ 0.03
PDE1B-207ENST00000550620 COX16Q9P0S2 106 aa15.23■□□□□ 0.03
PDE1B-207ENST00000550620 SNX13Q9Y5W8 968 aa15.23■□□□□ 0.03
PDE1B-207ENST00000550620 M0QYT0 321 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 SDHDO14521 159 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 PPEF2O14830 753 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 XPO1O14980 1071 aaKnown RBP15.22■□□□□ 0.03
PDE1B-207ENST00000550620 ZSCAN9O15535 394 aaPredicted RBP15.22■□□□□ 0.03
PDE1B-207ENST00000550620 PEX10O60683 326 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 BMP10O95393 424 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 AIF1P55008 147 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 ESRRGP62508 458 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 INTS6LQ5JSJ4 861 aaKnown RBP15.22■□□□□ 0.03
PDE1B-207ENST00000550620 NAPEPLDQ6IQ20 393 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 MAMDC4Q6UXC1 1216 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 ZNF554Q86TJ5 538 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 PELI3Q8N2H9 469 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 PCDH20Q8N6Y1 951 aaKnown RBP15.22■□□□□ 0.03
PDE1B-207ENST00000550620 LINC01465Q8N7H1 131 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 FNDC8Q8TC99 324 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 NT5C3BQ969T7 300 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 APBA2Q99767 749 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 MRPL46Q9H2W6 279 aaKnown RBP15.22■□□□□ 0.03
PDE1B-207ENST00000550620 TBCCD1Q9NVR7 557 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 TUBA8Q9NY65 449 aaPredicted RBP15.22■□□□□ 0.03
PDE1B-207ENST00000550620 MAGED2Q9UNF1 606 aaPredicted RBP15.22■□□□□ 0.03
PDE1B-207ENST00000550620 TCRBV3S1A0A5B6 114 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 FAM155AB1AL88 458 aaPredicted RBP15.22■□□□□ 0.03
PDE1B-207ENST00000550620 E7ENX8 843 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 TRIM24O15164 1050 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 PSMD3O43242 534 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 CSPG5O95196 566 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 VTNP04004 478 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 PDGFRBP09619 1106 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 TXNP10599 105 aaKnown RBP15.22■□□□□ 0.03
PDE1B-207ENST00000550620 ERCC2P18074 760 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 NMBRP28336 390 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 GNL1P36915 607 aaPredicted RBP15.22■□□□□ 0.03
PDE1B-207ENST00000550620 AVPR1AP37288 418 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 RAB10P61026 200 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 PRAMEF18Q5VWM3 479 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 REP15Q6BDI9 236 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 BNIPLQ7Z465 357 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 LINC00523Q86TU6 105 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 CENPLQ8N0S6 344 aaPredicted RBP15.22■□□□□ 0.03
PDE1B-207ENST00000550620 SLC2A14Q8TDB8 520 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 LPGAT1Q92604 370 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 NPY6RQ99463 290 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 MLPHQ9BV36 600 aaPredicted RBP15.22■□□□□ 0.03
PDE1B-207ENST00000550620 PCDHAC1Q9H158 963 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 UPF3AQ9H1J1 476 aaKnown RBP15.22■□□□□ 0.03
PDE1B-207ENST00000550620 PLGRKTQ9HBL7 147 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 TMPRSS4Q9NRS4 437 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 CACNA2D2Q9NY47 1150 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 RRN3Q9NYV6 651 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 GTSE1Q9NYZ3 720 aa15.22■□□□□ 0.03
PDE1B-207ENST00000550620 A0A1B0GTW7 788 aa15.21■□□□□ 0.03
PDE1B-207ENST00000550620 SOCS7O14512 581 aa15.21■□□□□ 0.03
PDE1B-207ENST00000550620 HSPA8P11142 646 aaKnown RBP15.21■□□□□ 0.03
PDE1B-207ENST00000550620 STMN1P16949 149 aa15.21■□□□□ 0.03
PDE1B-207ENST00000550620 CD68P34810 354 aaPredicted RBP15.21■□□□□ 0.03
PDE1B-207ENST00000550620 GMPSP49915 693 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms