RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 SETD3Q86TU7 594 aaPredicted RBP10.13□□□□□ -0.79
RAB5B-206ENST00000549505 UNC5BQ8IZJ1 945 aa10.13□□□□□ -0.79
RAB5B-206ENST00000549505 ATP2A3Q93084 1043 aa10.13□□□□□ -0.79
RAB5B-206ENST00000549505 HMCESQ96FZ2 354 aa10.13□□□□□ -0.79
RAB5B-206ENST00000549505 CELF6Q96J87 481 aaKnown RBP10.13□□□□□ -0.79
RAB5B-206ENST00000549505 YY1AP1Q9H869 796 aa10.13□□□□□ -0.79
RAB5B-206ENST00000549505 MID2Q9UJV3 735 aa10.13□□□□□ -0.79
RAB5B-206ENST00000549505 CAPN7Q9Y6W3 813 aa10.13□□□□□ -0.79
RAB5B-206ENST00000549505 KIAA0355O15063 1070 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 SLC7A4O43246 635 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 GREM1O60565 184 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 BAIAP3O94812 1187 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 HOXB8P17481 243 aaPredicted RBP10.12□□□□□ -0.79
RAB5B-206ENST00000549505 CD9P21926 228 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 NMBRP28336 390 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 LEPRP48357 1165 aaKnown RBP10.12□□□□□ -0.79
RAB5B-206ENST00000549505 IKBKEQ14164 716 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 SEPT7Q16181 437 aaKnown RBP10.12□□□□□ -0.79
RAB5B-206ENST00000549505 ALFQ53S48 1182 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 DCLK2Q8N568 766 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 PPHLN1Q8NEY8 458 aaKnown RBP10.12□□□□□ -0.79
RAB5B-206ENST00000549505 ZNF669Q96BR6 464 aaPredicted RBP10.12□□□□□ -0.79
RAB5B-206ENST00000549505 CEP41Q9BYV8 373 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 RBM22Q9NW64 420 aaKnown RBP eCLIP10.12□□□□□ -0.79
RAB5B-206ENST00000549505 DNMT3BQ9UBC3 853 aaKnown RBP10.12□□□□□ -0.79
RAB5B-206ENST00000549505 ILVBLA1L0T0 632 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 HEATR9A2RTY3 570 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 SOBPA7XYQ1 873 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 CAPN14A8MX76 684 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 G3V2L1 256 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 DFFAO00273 331 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 KDELR3O43731 214 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 PIAS1O75925 651 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 SERPINE1P05121 402 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 ERVK-10P10266 1014 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 NQO1P15559 274 aaKnown RBP10.12□□□□□ -0.79
RAB5B-206ENST00000549505 CR2P20023 1033 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 BGNP21810 368 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 HOXD9P28356 352 aaPredicted RBP10.12□□□□□ -0.79
RAB5B-206ENST00000549505 CRADDP78560 199 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 BMPR2Q13873 1038 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 IHHQ14623 411 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 PSMD5Q16401 504 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 MROH9Q5TGP6 573 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 PACS2Q86VP3 889 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 PGBD5Q8N414 524 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 RNF217Q8TC41 542 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 ARMC5Q96C12 935 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 LRRC37BQ96QE4 947 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 CHRAC1Q9NRG0 131 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 DNAJC28Q9NX36 388 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 COPG2Q9UBF2 871 aa10.12□□□□□ -0.79
RAB5B-206ENST00000549505 GOLGA8RI6L899 631 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 ZNF195O14628 629 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 PAPLNO95428 1278 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 LINC00271P0C7V0 271 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 LAG3P18627 525 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 PAMP19021 973 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 GABRB3P28472 473 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 ATP5C1P36542 298 aaKnown RBP10.11□□□□□ -0.79
RAB5B-206ENST00000549505 SERPINB5P36952 375 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 SUOXP51687 545 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 ELF3P78545 371 aaPredicted RBP10.11□□□□□ -0.79
RAB5B-206ENST00000549505 BST1Q10588 318 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 TUBB3Q13509 450 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 SETDB1Q15047 1291 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 MARC1Q5VT66 337 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 Q6ZNB5 142 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 CLNKQ7Z7G1 428 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 SLC7A6OSQ96CW6 309 aaPredicted RBP10.11□□□□□ -0.79
RAB5B-206ENST00000549505 MFSD3Q96ES6 412 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 GPR78Q96P69 363 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 KLF6Q99612 283 aaPredicted RBP10.11□□□□□ -0.79
RAB5B-206ENST00000549505 IQCGQ9H095 443 aaKnown RBP10.11□□□□□ -0.79
RAB5B-206ENST00000549505 SIK2Q9H0K1 926 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 MFSD1Q9H3U5 465 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 POPDC3Q9HBV1 291 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 TRIM17Q9Y577 477 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 ZNF106Q9H2Y7 1883 aaKnown RBP10.11□□□□□ -0.79
RAB5B-206ENST00000549505 ANAPC1Q9H1A4 1944 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 TLR5O60602 858 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 CLDN11O75508 207 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 CNTN5O94779 1100 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 HLA-DPA1P20036 260 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 CRABP2P29373 138 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 WNT3AP56704 352 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 EFEMP1Q12805 493 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 MTM1Q13496 603 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 TSTD2Q5T7W7 516 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 STRA8Q7Z7C7 330 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 NUDCD3Q8IVD9 361 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 NETO2Q8NC67 525 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 RFWD2Q8NHY2 731 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 CALML6Q8TD86 181 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 ZFRQ96KR1 1074 aaKnown RBP10.11□□□□□ -0.79
RAB5B-206ENST00000549505 SORT1Q99523 831 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 ECT2Q9H8V3 914 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.11□□□□□ -0.79
RAB5B-206ENST00000549505 MPP6Q9NZW5 540 aa10.11□□□□□ -0.79
RAB5B-206ENST00000549505 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms