RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 FETUBQ9UGM5 382 aa11.27□□□□□ -0.6
LINC00661-204ENST00000549354 EMCNQ9ULC0 261 aa11.27□□□□□ -0.6
LINC00661-204ENST00000549354 ZBTB14O43829 449 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 DAB1O75553 588 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 MYCP01106 439 aaPredicted RBP11.27□□□□□ -0.61
LINC00661-204ENST00000549354 JCHAINP01591 159 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 HNRNPLP14866 589 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC00661-204ENST00000549354 DESP17661 470 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 RPL10P27635 214 aaKnown RBP11.27□□□□□ -0.61
LINC00661-204ENST00000549354 MATKP42679 507 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 ARHGEF6Q15052 776 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 DPYSL2Q16555 572 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 SLC9B1Q4ZJI4 515 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 FBXL19Q6PCT2 694 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 ZNF534Q76KX8 674 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 TRIM42Q8IWZ5 723 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 SCML4Q8N228 414 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 MAPK15Q8TD08 544 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 TFB1MQ8WVM0 346 aaKnown RBP11.27□□□□□ -0.61
LINC00661-204ENST00000549354 MPP4Q96JB8 637 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 KCTD15Q96SI1 283 aaPredicted RBP11.27□□□□□ -0.61
LINC00661-204ENST00000549354 ACBD6Q9BR61 282 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 CENPKQ9BS16 269 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 ZNF670Q9BS34 389 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 GRIP2Q9C0E4 1043 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 KLHL4Q9C0H6 718 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 TASP1Q9H6P5 420 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 LRRC4Q9HBW1 653 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 C20orf96Q9NUD7 363 aaPredicted RBP11.27□□□□□ -0.61
LINC00661-204ENST00000549354 DTLQ9NZJ0 730 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 DSEQ9UL01 958 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 TDRD15B5MCY1 1934 aaKnown RBP11.27□□□□□ -0.61
LINC00661-204ENST00000549354 FKTNO75072 461 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 SEC24DO94855 1032 aaPredicted RBP11.27□□□□□ -0.61
LINC00661-204ENST00000549354 RALBP11234 206 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 FGF3P11487 239 aaPredicted RBP11.27□□□□□ -0.61
LINC00661-204ENST00000549354 MAPK10P53779 464 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 NAGLUP54802 743 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 FOLH1Q04609 750 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 PDK3Q15120 406 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 DCLRE1AQ6PJP8 1040 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 MARK2Q7KZI7 788 aaKnown RBP11.27□□□□□ -0.61
LINC00661-204ENST00000549354 OTOP3Q7RTS5 596 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 DIS3LQ8TF46 1054 aaKnown RBP11.27□□□□□ -0.61
LINC00661-204ENST00000549354 EZH1Q92800 747 aaPredicted RBP11.27□□□□□ -0.61
LINC00661-204ENST00000549354 P2RY11Q96G91 374 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 LENG8Q96PV6 779 aaPredicted RBP11.27□□□□□ -0.61
LINC00661-204ENST00000549354 OR52B2Q96RD2 323 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 PAAF1Q9BRP4 392 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 TRPV6Q9H1D0 765 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 COPS7BQ9H9Q2 264 aaPredicted RBP11.27□□□□□ -0.61
LINC00661-204ENST00000549354 PRDM16Q9HAZ2 1276 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC00661-204ENST00000549354 NOD1Q9Y239 953 aa11.27□□□□□ -0.61
LINC00661-204ENST00000549354 HHLA1C9JL84 531 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 F8W8V4 182 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 ARVCFO00192 962 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 FBXO21O94952 628 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 MT-CYBP00156 380 aaPredicted RBP11.26□□□□□ -0.61
LINC00661-204ENST00000549354 ODC1P11926 461 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 COL6A1P12109 1028 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 NCAM1P13591 858 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 MPSTP25325 297 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 PCSK1P29120 753 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 CRHR1P34998 444 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 VEGFBP49765 207 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 SLC25A52Q3SY17 297 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 MBLAC2Q68D91 279 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 IPMKQ8NFU5 416 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 PHF21BQ96EK2 531 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 SUDS3Q9H7L9 328 aaPredicted RBP11.26□□□□□ -0.61
LINC00661-204ENST00000549354 COG4Q9H9E3 785 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 RHBDL2Q9NX52 303 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 GTSE1Q9NYZ3 720 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 ADA2Q9NZK5 511 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 A0A1B0GTW7 788 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 TMEM189-UBE2V1I3L0A0 370 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 USP17L7P0C7H9 530 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 FAM200BP0CF97 657 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 TYMPP19971 482 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 TGM2P21980 687 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 PMLP29590 882 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 L1CAMP32004 1257 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 CASP2P42575 452 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 DSC1Q08554 894 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 SDHAF4Q5VUM1 108 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 OTUD1Q5VV17 481 aaPredicted RBP11.26□□□□□ -0.61
LINC00661-204ENST00000549354 NAPRTQ6XQN6 538 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 SLC24A5Q71RS6 500 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 FAM35AQ86V20 835 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 SPATA24Q86W54 205 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 ICA1LQ8NDH6 482 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 ZMIZ2Q8NF64 920 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 HTR3CQ8WXA8 447 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 LINC01599Q8WXQ3 324 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 RTP4Q96DX8 246 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 SUSD3Q96L08 255 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 CSPG4P5Q96PW8 444 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 TRAPPC9Q96Q05 1148 aa11.26□□□□□ -0.61
LINC00661-204ENST00000549354 NPY6RQ99463 290 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms