RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 FRS2Q8WU20 508 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 IFT43Q96FT9 208 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 SLC2A13Q96QE2 648 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 SPAG5Q96R06 1193 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 PPP1R9BQ96SB3 815 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 DUSP23Q9BVJ7 150 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 SLC25A18Q9H1K4 315 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 ANO10Q9NW15 660 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 FANCLQ9NW38 375 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 ASNSD1Q9NWL6 643 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 KCNK4Q9NYG8 393 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 TAB2Q9NYJ8 693 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 SLC12A6Q9UHW9 1150 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 ACSL6Q9UKU0 697 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 PCDHGC3Q9UN70 934 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 PCDHGA7Q9Y5G6 932 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 FHOD1Q9Y613 1164 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 CCDC187A0A096LP49 1063 aa12.48□□□□□ -0.41
DDX54-206ENST00000549271 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.48□□□□□ -0.41
DDX54-206ENST00000549271 TCAF2A6NFQ2 919 aa12.48□□□□□ -0.41
DDX54-206ENST00000549271 NEMP2A6NFY4 417 aa12.48□□□□□ -0.41
DDX54-206ENST00000549271 ENO4A6NNW6 628 aa12.48□□□□□ -0.41
DDX54-206ENST00000549271 MBD3O95983 291 aa12.48□□□□□ -0.41
DDX54-206ENST00000549271 PDX1P52945 283 aa12.48□□□□□ -0.41
DDX54-206ENST00000549271 FOXK1P85037 733 aa12.48□□□□□ -0.41
DDX54-206ENST00000549271 PTK2Q05397 1052 aa12.48□□□□□ -0.41
DDX54-206ENST00000549271 ZNF177Q13360 481 aaPredicted RBP12.48□□□□□ -0.41
DDX54-206ENST00000549271 PDCLQ13371 301 aa12.48□□□□□ -0.41
DDX54-206ENST00000549271 TAF5Q15542 800 aa12.48□□□□□ -0.41
DDX54-206ENST00000549271 TGIF1Q15583 401 aa12.48□□□□□ -0.41
DDX54-206ENST00000549271 TBR1Q16650 682 aa12.48□□□□□ -0.41
DDX54-206ENST00000549271 POM121L1PQ3SYA9 428 aa12.48□□□□□ -0.41
DDX54-206ENST00000549271 RABGAP1LQ5R372 815 aa12.48□□□□□ -0.41
DDX54-206ENST00000549271 CCDC183Q5T5S1 534 aa12.48□□□□□ -0.41
DDX54-206ENST00000549271 ZCCHC8Q6NZY4 707 aaKnown RBP12.48□□□□□ -0.41
DDX54-206ENST00000549271 GUSBP11Q6P575 273 aa12.48□□□□□ -0.41
DDX54-206ENST00000549271 SASS6Q6UVJ0 657 aa12.48□□□□□ -0.41
DDX54-206ENST00000549271 CCAR2Q8N163 923 aaKnown RBP12.48□□□□□ -0.41
DDX54-206ENST00000549271 TPCN2Q8NHX9 752 aa12.48□□□□□ -0.41
DDX54-206ENST00000549271 ARRDC3Q96B67 414 aa12.48□□□□□ -0.41
DDX54-206ENST00000549271 ALG14Q96F25 216 aa12.48□□□□□ -0.41
DDX54-206ENST00000549271 RPL10LQ96L21 214 aaKnown RBP12.48□□□□□ -0.41
DDX54-206ENST00000549271 CPXM1Q96SM3 734 aa12.48□□□□□ -0.41
DDX54-206ENST00000549271 EPN3Q9H201 632 aa12.48□□□□□ -0.41
DDX54-206ENST00000549271 VPS16Q9H269 839 aa12.48□□□□□ -0.41
DDX54-206ENST00000549271 GEMIN8Q9NWZ8 242 aaKnown RBP12.48□□□□□ -0.41
DDX54-206ENST00000549271 TMEM63CQ9P1W3 806 aa12.48□□□□□ -0.41
DDX54-206ENST00000549271 CEP83Q9Y592 693 aa12.48□□□□□ -0.41
DDX54-206ENST00000549271 LRBAP50851 2863 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 EME2A4GXA9 379 aaPredicted RBP12.47□□□□□ -0.41
DDX54-206ENST00000549271 PES1O00541 588 aaKnown RBP12.47□□□□□ -0.41
DDX54-206ENST00000549271 RIOK3O14730 519 aaKnown RBP12.47□□□□□ -0.41
DDX54-206ENST00000549271 ALOX15BO15296 676 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 ATP9BO43861 1147 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 NEBLO76041 1014 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 UCHL3P15374 230 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 SLC5A2P31639 672 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 CCR1P32246 355 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 STK19P49842 368 aaPredicted RBP12.47□□□□□ -0.41
DDX54-206ENST00000549271 KLK7P49862 253 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 PITX1P78337 314 aaPredicted RBP12.47□□□□□ -0.41
DDX54-206ENST00000549271 CDK17Q00537 523 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 NCAPHQ15003 741 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 STX1AQ16623 288 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 CDKN3Q16667 212 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 C5orf22Q49AR2 442 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 EFHC1Q5JVL4 640 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 AGBL4Q5VU57 503 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 CXorf57Q6NSI4 855 aaKnown RBP12.47□□□□□ -0.41
DDX54-206ENST00000549271 FBXL22Q6P050 247 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 EFL1Q7Z2Z2 1120 aaKnown RBP12.47□□□□□ -0.41
DDX54-206ENST00000549271 DSG4Q86SJ6 1040 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 PASD1Q8IV76 773 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 SLC22A18ASQ8N1D0 253 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 OR13H1Q8NG92 308 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 PPP1R13BQ96KQ4 1090 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 GANQ9H2C0 597 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 HSD3B7Q9H2F3 369 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 PLCB1Q9NQ66 1216 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 NCKIPSDQ9NZQ3 722 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 SARDHQ9UL12 918 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 PAXBP1Q9Y5B6 917 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 OR51B4Q9Y5P0 310 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 CENPEQ02224 2701 aa12.47□□□□□ -0.41
DDX54-206ENST00000549271 ZFC3H1O60293 1989 aaKnown RBP12.47□□□□□ -0.41
DDX54-206ENST00000549271 CPED1A4D0V7 1026 aa12.46□□□□□ -0.41
DDX54-206ENST00000549271 LRRC10BA6NIK2 292 aa12.46□□□□□ -0.41
DDX54-206ENST00000549271 HSF2BPO75031 334 aa12.46□□□□□ -0.41
DDX54-206ENST00000549271 VAV1P15498 845 aa12.46□□□□□ -0.41
DDX54-206ENST00000549271 PDGFRAP16234 1089 aa12.46□□□□□ -0.41
DDX54-206ENST00000549271 KRT9P35527 623 aa12.46□□□□□ -0.41
DDX54-206ENST00000549271 COPB1P53618 953 aaKnown RBP12.46□□□□□ -0.41
DDX54-206ENST00000549271 TAS2R38P59533 333 aa12.46□□□□□ -0.41
DDX54-206ENST00000549271 BPIFB4P59827 614 aa12.46□□□□□ -0.41
DDX54-206ENST00000549271 CNTN1Q12860 1018 aa12.46□□□□□ -0.41
DDX54-206ENST00000549271 RAPGEF1Q13905 1077 aa12.46□□□□□ -0.41
DDX54-206ENST00000549271 CLCA4Q14CN2 919 aa12.46□□□□□ -0.41
DDX54-206ENST00000549271 IGFBP7Q16270 282 aa12.46□□□□□ -0.41
DDX54-206ENST00000549271 FAM46CQ5VWP2 391 aa12.46□□□□□ -0.41
DDX54-206ENST00000549271 C14orf80Q86SX3 495 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms