RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 C10orf82Q8WW14 230 aa21.23■□□□□ 0.99
RITA1-201ENST00000548278 TADA1Q96BN2 335 aa21.23■□□□□ 0.99
RITA1-201ENST00000548278 TSSK1BQ9BXA7 367 aa21.23■□□□□ 0.99
RITA1-201ENST00000548278 RNF38Q9H0F5 515 aa21.23■□□□□ 0.99
RITA1-201ENST00000548278 RETREG1Q9H6L5 497 aa21.23■□□□□ 0.99
RITA1-201ENST00000548278 EMCNQ9ULC0 261 aa21.23■□□□□ 0.99
RITA1-201ENST00000548278 SLC12A4Q9UP95 1085 aa21.23■□□□□ 0.99
RITA1-201ENST00000548278 KIAA0100Q14667 2235 aaKnown RBP21.23■□□□□ 0.99
RITA1-201ENST00000548278 H3BNC9 293 aa21.22■□□□□ 0.99
RITA1-201ENST00000548278 IL1BP01584 269 aa21.22■□□□□ 0.99
RITA1-201ENST00000548278 NEFHP12036 1026 aa21.22■□□□□ 0.99
RITA1-201ENST00000548278 CSE1LP55060 971 aaKnown RBP21.22■□□□□ 0.99
RITA1-201ENST00000548278 ITKQ08881 620 aa21.22■□□□□ 0.99
RITA1-201ENST00000548278 TWF1Q12792 350 aa21.22■□□□□ 0.99
RITA1-201ENST00000548278 TAF12Q16514 161 aa21.22■□□□□ 0.99
RITA1-201ENST00000548278 PCSK7Q16549 785 aa21.22■□□□□ 0.99
RITA1-201ENST00000548278 GALNTL6Q49A17 601 aa21.22■□□□□ 0.99
RITA1-201ENST00000548278 FITM2Q8N6M3 262 aa21.22■□□□□ 0.99
RITA1-201ENST00000548278 ARRDC2Q8TBH0 407 aa21.22■□□□□ 0.99
RITA1-201ENST00000548278 GKN1Q9NS71 199 aa21.22■□□□□ 0.99
RITA1-201ENST00000548278 ZFP37Q9Y6Q3 630 aaPredicted RBP21.22■□□□□ 0.99
RITA1-201ENST00000548278 C2orf78A6NCI8 922 aa21.22■□□□□ 0.99
RITA1-201ENST00000548278 GOLGA8TH3BQL2 631 aa21.22■□□□□ 0.99
RITA1-201ENST00000548278 PRRG1O14668 218 aa21.22■□□□□ 0.99
RITA1-201ENST00000548278 GLRA3O75311 464 aa21.22■□□□□ 0.99
RITA1-201ENST00000548278 UBOX5O94941 541 aa21.22■□□□□ 0.99
RITA1-201ENST00000548278 ACRP10323 421 aa21.22■□□□□ 0.99
RITA1-201ENST00000548278 TYK2P29597 1187 aa21.22■□□□□ 0.99
RITA1-201ENST00000548278 LBRQ14739 615 aaKnown RBP21.22■□□□□ 0.99
RITA1-201ENST00000548278 VEPH1Q14D04 833 aa21.22■□□□□ 0.99
RITA1-201ENST00000548278 PPM1JQ5JR12 505 aa21.22■□□□□ 0.99
RITA1-201ENST00000548278 TCEAL8Q8IYN2 117 aa21.22■□□□□ 0.99
RITA1-201ENST00000548278 KLF16Q9BXK1 252 aaPredicted RBP21.22■□□□□ 0.99
RITA1-201ENST00000548278 PDFQ9HBH1 243 aa21.22■□□□□ 0.99
RITA1-201ENST00000548278 RXFP1Q9HBX9 757 aa21.22■□□□□ 0.99
RITA1-201ENST00000548278 SNX15Q9NRS6 342 aa21.22■□□□□ 0.99
RITA1-201ENST00000548278 DCDC2Q9UHG0 476 aa21.22■□□□□ 0.99
RITA1-201ENST00000548278 USH1CQ9Y6N9 552 aa21.22■□□□□ 0.99
RITA1-201ENST00000548278 CARNS1A5YM72 827 aa21.21■□□□□ 0.99
RITA1-201ENST00000548278 BIRC5O15392 142 aa21.21■□□□□ 0.99
RITA1-201ENST00000548278 GSRP00390 522 aa21.21■□□□□ 0.99
RITA1-201ENST00000548278 GSTA1P08263 222 aa21.21■□□□□ 0.99
RITA1-201ENST00000548278 ARNTP27540 789 aa21.21■□□□□ 0.99
RITA1-201ENST00000548278 CORO1AP31146 461 aaKnown RBP21.21■□□□□ 0.99
RITA1-201ENST00000548278 ARCN1P48444 511 aaKnown RBP21.21■□□□□ 0.99
RITA1-201ENST00000548278 CDH4P55283 916 aa21.21■□□□□ 0.99
RITA1-201ENST00000548278 TMCO4Q5TGY1 634 aa21.21■□□□□ 0.99
RITA1-201ENST00000548278 FYB2Q5VWT5 728 aa21.21■□□□□ 0.99
RITA1-201ENST00000548278 ESRP1Q6NXG1 681 aaKnown RBP21.21■□□□□ 0.99
RITA1-201ENST00000548278 DNAJB7Q7Z6W7 309 aaPredicted RBP21.21■□□□□ 0.99
RITA1-201ENST00000548278 TRIM42Q8IWZ5 723 aa21.21■□□□□ 0.99
RITA1-201ENST00000548278 PPM1EQ8WY54 764 aa21.21■□□□□ 0.99
RITA1-201ENST00000548278 PRICKLE1Q96MT3 831 aaPredicted RBP21.21■□□□□ 0.99
RITA1-201ENST00000548278 TREX1Q9NSU2 369 aa21.21■□□□□ 0.99
RITA1-201ENST00000548278 MTO1Q9Y2Z2 717 aaKnown RBP21.21■□□□□ 0.99
RITA1-201ENST00000548278 KIAA1671Q9BY89 1806 aa21.21■□□□□ 0.99
RITA1-201ENST00000548278 PTPRSQ13332 1948 aa21.21■□□□□ 0.99
RITA1-201ENST00000548278 A0A0D9SEW6 157 aa21.2■□□□□ 0.99
RITA1-201ENST00000548278 BPGMP07738 259 aa21.2■□□□□ 0.99
RITA1-201ENST00000548278 RAG1P15918 1043 aa21.2■□□□□ 0.99
RITA1-201ENST00000548278 ETFBP38117 255 aa21.2■□□□□ 0.99
RITA1-201ENST00000548278 PPP3CCP48454 512 aa21.2■□□□□ 0.99
RITA1-201ENST00000548278 SERPINB8P50452 374 aa21.2■□□□□ 0.99
RITA1-201ENST00000548278 RPS24P62847 133 aaKnown RBP21.2■□□□□ 0.99
RITA1-201ENST00000548278 OVGP1Q12889 678 aa21.2■□□□□ 0.99
RITA1-201ENST00000548278 INSCQ1MX18 579 aa21.2■□□□□ 0.99
RITA1-201ENST00000548278 N4BP2L1Q5TBK1 243 aaPredicted RBP21.2■□□□□ 0.99
RITA1-201ENST00000548278 CMC1Q7Z7K0 106 aa21.2■□□□□ 0.99
RITA1-201ENST00000548278 TMEM150AQ86TG1 271 aa21.2■□□□□ 0.99
RITA1-201ENST00000548278 NUDCD3Q8IVD9 361 aa21.2■□□□□ 0.99
RITA1-201ENST00000548278 CNTN4Q8IWV2 1026 aa21.2■□□□□ 0.99
RITA1-201ENST00000548278 GBP7Q8N8V2 638 aaPredicted RBP21.2■□□□□ 0.99
RITA1-201ENST00000548278 OR52K2Q8NGK3 314 aa21.2■□□□□ 0.99
RITA1-201ENST00000548278 ATP2A3Q93084 1043 aa21.2■□□□□ 0.99
RITA1-201ENST00000548278 ATXN7L3BQ96GX2 97 aa21.2■□□□□ 0.99
RITA1-201ENST00000548278 YME1L1Q96TA2 773 aa21.2■□□□□ 0.99
RITA1-201ENST00000548278 MAGEH1Q9H213 219 aa21.2■□□□□ 0.99
RITA1-201ENST00000548278 NPHS2Q9NP85 383 aa21.2■□□□□ 0.99
RITA1-201ENST00000548278 NSMCE4AQ9NXX6 385 aa21.2■□□□□ 0.99
RITA1-201ENST00000548278 SLC2A6Q9UGQ3 507 aa21.2■□□□□ 0.99
RITA1-201ENST00000548278 CAPN7Q9Y6W3 813 aa21.2■□□□□ 0.99
RITA1-201ENST00000548278 TTC24A2A3L6 582 aaPredicted RBP21.2■□□□□ 0.98
RITA1-201ENST00000548278 TIMM44O43615 452 aa21.2■□□□□ 0.98
RITA1-201ENST00000548278 LILRB3O75022 631 aa21.2■□□□□ 0.98
RITA1-201ENST00000548278 PRKCGP05129 697 aa21.2■□□□□ 0.98
RITA1-201ENST00000548278 HOXD9P28356 352 aaPredicted RBP21.2■□□□□ 0.98
RITA1-201ENST00000548278 ELF1P32519 619 aa21.2■□□□□ 0.98
RITA1-201ENST00000548278 ABCG1P45844 678 aa21.2■□□□□ 0.98
RITA1-201ENST00000548278 GNA12Q03113 381 aa21.2■□□□□ 0.98
RITA1-201ENST00000548278 CCDC15Q0P6D6 951 aa21.2■□□□□ 0.98
RITA1-201ENST00000548278 MSLNQ13421 630 aaPredicted RBP21.2■□□□□ 0.98
RITA1-201ENST00000548278 RABGAP1LQ5R372 815 aa21.2■□□□□ 0.98
RITA1-201ENST00000548278 ARMC3Q5W041 872 aa21.2■□□□□ 0.98
RITA1-201ENST00000548278 CES4AQ5XG92 561 aa21.2■□□□□ 0.98
RITA1-201ENST00000548278 C16orf46Q6P387 395 aa21.2■□□□□ 0.98
RITA1-201ENST00000548278 MICALL1Q8N3F8 863 aa21.2■□□□□ 0.98
RITA1-201ENST00000548278 SLC25A41Q8N5S1 370 aa21.2■□□□□ 0.98
RITA1-201ENST00000548278 WBP2Q969T9 261 aa21.2■□□□□ 0.98
RITA1-201ENST00000548278 MRPL17Q9NRX2 175 aaKnown RBP21.2■□□□□ 0.98
RITA1-201ENST00000548278 INSL5Q9Y5Q6 135 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms